RNA–Protein interactions for RNA: ENST00000326335.8

CUL4A-201, Transcript of cullin 4A, humanhuman

TSL 1 (best) BASIC

Gene CUL4A, Length 3,705 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL4A-201ENST00000326335 STYK1Q6J9G0 422 aa11.7□□□□□ -0.54
CUL4A-201ENST00000326335 GPR161Q8N6U8 529 aaKnown RBP11.7□□□□□ -0.54
CUL4A-201ENST00000326335 LENG9Q96B70 501 aa11.7□□□□□ -0.54
CUL4A-201ENST00000326335 WRNIP1Q96S55 665 aa11.7□□□□□ -0.54
CUL4A-201ENST00000326335 DNAJC7Q99615 494 aa11.7□□□□□ -0.54
CUL4A-201ENST00000326335 GTPBP4Q9BZE4 634 aaKnown RBP11.7□□□□□ -0.54
CUL4A-201ENST00000326335 ZHX2Q9Y6X8 837 aa11.7□□□□□ -0.54
CUL4A-201ENST00000326335 NHSQ6T4R5 1651 aa11.69□□□□□ -0.54
CUL4A-201ENST00000326335 ITIH6Q6UXX5 1313 aa11.69□□□□□ -0.54
CUL4A-201ENST00000326335 KDM3AQ9Y4C1 1321 aa11.69□□□□□ -0.54
CUL4A-201ENST00000326335 RGL2O15211 777 aa11.69□□□□□ -0.54
CUL4A-201ENST00000326335 GCFC2P16383 781 aaKnown RBP11.69□□□□□ -0.54
CUL4A-201ENST00000326335 KLRC1P26715 233 aa11.69□□□□□ -0.54
CUL4A-201ENST00000326335 COPB2P35606 906 aa11.69□□□□□ -0.54
CUL4A-201ENST00000326335 SLC12A3P55017 1021 aa11.69□□□□□ -0.54
CUL4A-201ENST00000326335 MKRN3Q13064 507 aaKnown RBP11.69□□□□□ -0.54
CUL4A-201ENST00000326335 SLC9C1Q4G0N8 1177 aa11.69□□□□□ -0.54
CUL4A-201ENST00000326335 CEP55Q53EZ4 464 aa11.69□□□□□ -0.54
CUL4A-201ENST00000326335 C2CD6Q53TS8 623 aa11.69□□□□□ -0.54
CUL4A-201ENST00000326335 RINT1Q6NUQ1 792 aa11.69□□□□□ -0.54
CUL4A-201ENST00000326335 PPP1R3FQ6ZSY5 799 aaPredicted RBP11.69□□□□□ -0.54
CUL4A-201ENST00000326335 CHURC1Q8WUH1 139 aa11.69□□□□□ -0.54
CUL4A-201ENST00000326335 PPP1R16BQ96T49 567 aa11.69□□□□□ -0.54
CUL4A-201ENST00000326335 AJAP1Q9UKB5 411 aaPredicted RBP11.69□□□□□ -0.54
CUL4A-201ENST00000326335 SLC16A4O15374 487 aa11.69□□□□□ -0.54
CUL4A-201ENST00000326335 PALMO75781 387 aa11.69□□□□□ -0.54
CUL4A-201ENST00000326335 ASIC2Q16515 512 aa11.69□□□□□ -0.54
CUL4A-201ENST00000326335 CYFIP1Q7L576 1253 aa11.69□□□□□ -0.54
CUL4A-201ENST00000326335 ATG4CQ96DT6 458 aa11.69□□□□□ -0.54
CUL4A-201ENST00000326335 POP1Q99575 1024 aaKnown RBP11.69□□□□□ -0.54
CUL4A-201ENST00000326335 AP1M1Q9BXS5 423 aa11.69□□□□□ -0.54
CUL4A-201ENST00000326335 KCNMB3Q9NPA1 279 aa11.69□□□□□ -0.54
CUL4A-201ENST00000326335 ZNRF3Q9ULT6 936 aa11.69□□□□□ -0.54
CUL4A-201ENST00000326335 SIK3Q9Y2K2 1263 aa11.69□□□□□ -0.54
CUL4A-201ENST00000326335 RIPK3Q9Y572 518 aa11.69□□□□□ -0.54
CUL4A-201ENST00000326335 UBR3Q6ZT12 1888 aa11.69□□□□□ -0.54
CUL4A-201ENST00000326335 BACH1O14867 736 aa11.69□□□□□ -0.54
CUL4A-201ENST00000326335 ATP9AO75110 1047 aa11.69□□□□□ -0.54
CUL4A-201ENST00000326335 SLITRK3O94933 977 aa11.69□□□□□ -0.54
CUL4A-201ENST00000326335 MYBL2P10244 700 aa11.69□□□□□ -0.54
CUL4A-201ENST00000326335 BAG6P46379 1132 aa11.69□□□□□ -0.54
CUL4A-201ENST00000326335 KCNJ6P48051 423 aa11.69□□□□□ -0.54
CUL4A-201ENST00000326335 GCLMP48507 274 aa11.69□□□□□ -0.54
CUL4A-201ENST00000326335 GMPSP49915 693 aaPredicted RBP11.69□□□□□ -0.54
CUL4A-201ENST00000326335 USP11P51784 963 aa11.69□□□□□ -0.54
CUL4A-201ENST00000326335 PEX3P56589 373 aa11.69□□□□□ -0.54
CUL4A-201ENST00000326335 KNOP1Q1ED39 458 aaKnown RBP11.69□□□□□ -0.54
CUL4A-201ENST00000326335 TAOK3Q9H2K8 898 aa11.69□□□□□ -0.54
CUL4A-201ENST00000326335 VCPKMTQ9H867 229 aa11.69□□□□□ -0.54
CUL4A-201ENST00000326335 KCNH7Q9NS40 1196 aa11.69□□□□□ -0.54
CUL4A-201ENST00000326335 BRWD3Q6RI45 1802 aa11.68□□□□□ -0.54
CUL4A-201ENST00000326335 TLR2O60603 784 aa11.68□□□□□ -0.54
CUL4A-201ENST00000326335 DLATP10515 647 aaKnown RBP11.68□□□□□ -0.54
CUL4A-201ENST00000326335 ITGB5P18084 799 aa11.68□□□□□ -0.54
CUL4A-201ENST00000326335 CAP2P40123 477 aa11.68□□□□□ -0.54
CUL4A-201ENST00000326335 RPS6P62753 249 aaKnown RBP11.68□□□□□ -0.54
CUL4A-201ENST00000326335 LRRC63Q05C16 580 aa11.68□□□□□ -0.54
CUL4A-201ENST00000326335 C7orf43Q8WVR3 580 aa11.68□□□□□ -0.54
CUL4A-201ENST00000326335 FAM151AQ8WW52 585 aa11.68□□□□□ -0.54
CUL4A-201ENST00000326335 CNKSR2Q8WXI2 1034 aa11.68□□□□□ -0.54
CUL4A-201ENST00000326335 EHD4Q9H223 541 aa11.68□□□□□ -0.54
CUL4A-201ENST00000326335 H3BQF6 201 aa11.68□□□□□ -0.54
CUL4A-201ENST00000326335 EPB41P11171 864 aaKnown RBP11.68□□□□□ -0.54
CUL4A-201ENST00000326335 PTK2Q05397 1052 aa11.68□□□□□ -0.54
CUL4A-201ENST00000326335 TTLL12Q14166 644 aaPredicted RBP11.68□□□□□ -0.54
CUL4A-201ENST00000326335 EPC2Q52LR7 807 aa11.68□□□□□ -0.54
CUL4A-201ENST00000326335 XKR9Q5GH70 373 aa11.68□□□□□ -0.54
CUL4A-201ENST00000326335 RABGGTAQ92696 567 aa11.68□□□□□ -0.54
CUL4A-201ENST00000326335 RMDN3Q96TC7 470 aa11.68□□□□□ -0.54
CUL4A-201ENST00000326335 PAGR1Q9BTK6 254 aa11.68□□□□□ -0.54
CUL4A-201ENST00000326335 LRRC1Q9BTT6 524 aa11.68□□□□□ -0.54
CUL4A-201ENST00000326335 NUP58Q9BVL2 599 aa11.68□□□□□ -0.54
CUL4A-201ENST00000326335 DEFB129Q9H1M3 183 aa11.68□□□□□ -0.54
CUL4A-201ENST00000326335 RPAP3Q9H6T3 665 aaPredicted RBP11.68□□□□□ -0.54
CUL4A-201ENST00000326335 PIM2Q9P1W9 311 aa11.68□□□□□ -0.54
CUL4A-201ENST00000326335 MYH4Q9Y623 1939 aa11.68□□□□□ -0.54
CUL4A-201ENST00000326335 A0A1W2PQC6 194 aa11.68□□□□□ -0.54
CUL4A-201ENST00000326335 KCNK3O14649 394 aa11.68□□□□□ -0.54
CUL4A-201ENST00000326335 HIP1RO75146 1068 aa11.68□□□□□ -0.54
CUL4A-201ENST00000326335 MYL1P05976 194 aa11.68□□□□□ -0.54
CUL4A-201ENST00000326335 RPA1P27694 616 aa11.68□□□□□ -0.54
CUL4A-201ENST00000326335 SREBF1P36956 1147 aa11.68□□□□□ -0.54
CUL4A-201ENST00000326335 VAV2P52735 878 aa11.68□□□□□ -0.54
CUL4A-201ENST00000326335 TRADDQ15628 312 aa11.68□□□□□ -0.54
CUL4A-201ENST00000326335 SEZ6Q53EL9 994 aa11.68□□□□□ -0.54
CUL4A-201ENST00000326335 ANGEL2Q5VTE6 544 aaKnown RBP11.68□□□□□ -0.54
CUL4A-201ENST00000326335 FAM186BQ8IYM0 893 aa11.68□□□□□ -0.54
CUL4A-201ENST00000326335 FAM212AQ96EL1 285 aa11.68□□□□□ -0.54
CUL4A-201ENST00000326335 DMGDHQ9UI17 866 aaKnown RBP11.68□□□□□ -0.54
CUL4A-201ENST00000326335 CNOT7Q9UIV1 285 aaKnown RBP11.68□□□□□ -0.54
CUL4A-201ENST00000326335 DLG4P78352 724 aa11.67□□□□□ -0.54
CUL4A-201ENST00000326335 HLTFQ14527 1009 aaKnown RBP eCLIP11.67□□□□□ -0.54
CUL4A-201ENST00000326335 HSP90B2PQ58FF3 399 aa11.67□□□□□ -0.54
CUL4A-201ENST00000326335 ARHGEF16Q5VV41 709 aa11.67□□□□□ -0.54
CUL4A-201ENST00000326335 GLYCTKQ8IVS8 523 aa11.67□□□□□ -0.54
CUL4A-201ENST00000326335 PPP1R13LQ8WUF5 828 aa11.67□□□□□ -0.54
CUL4A-201ENST00000326335 LRRC27Q9C0I9 530 aa11.67□□□□□ -0.54
CUL4A-201ENST00000326335 MYO1AQ9UBC5 1043 aa11.67□□□□□ -0.54
CUL4A-201ENST00000326335 RGS17Q9UGC6 210 aaPredicted RBP11.67□□□□□ -0.54
CUL4A-201ENST00000326335 HACL1Q9UJ83 578 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms