RNA–Protein interactions for RNA: ENST00000325404.2

SOX2-201, Transcript of SRY-box 2, humanhuman

APPRIS P1 BASIC

Gene SOX2, Length 2,513 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-201ENST00000325404 CALUO43852 315 aaPredicted RBP21.78■■□□□ 1.08
SOX2-201ENST00000325404 GLI1P08151 1106 aa21.78■■□□□ 1.08
SOX2-201ENST00000325404 MYBP10242 640 aa21.78■■□□□ 1.08
SOX2-201ENST00000325404 ERCC3P19447 782 aa21.78■■□□□ 1.08
SOX2-201ENST00000325404 KCNA3P22001 575 aa21.78■■□□□ 1.08
SOX2-201ENST00000325404 NR2F2P24468 414 aa21.78■■□□□ 1.08
SOX2-201ENST00000325404 TNNC1P63316 161 aa21.78■■□□□ 1.08
SOX2-201ENST00000325404 GIT2Q14161 759 aa21.78■■□□□ 1.08
SOX2-201ENST00000325404 GJA10Q969M2 543 aa21.78■■□□□ 1.08
SOX2-201ENST00000325404 FAM20AQ96MK3 541 aa21.78■■□□□ 1.08
SOX2-201ENST00000325404 ADAMTS1Q9UHI8 967 aa21.78■■□□□ 1.08
SOX2-201ENST00000325404 PCDHAC2Q9Y5I4 1007 aa21.78■■□□□ 1.08
SOX2-201ENST00000325404 MYH4Q9Y623 1939 aa21.78■■□□□ 1.08
SOX2-201ENST00000325404 NPHP3-ACAD11A0A0J9YXS1 232 aa21.78■■□□□ 1.08
SOX2-201ENST00000325404 USP17L15C9J2P7 530 aa21.78■■□□□ 1.08
SOX2-201ENST00000325404 USP17L13C9JLJ4 530 aa21.78■■□□□ 1.08
SOX2-201ENST00000325404 USP17L11C9JVI0 530 aa21.78■■□□□ 1.08
SOX2-201ENST00000325404 USP17L18D6R9N7 530 aa21.78■■□□□ 1.08
SOX2-201ENST00000325404 USP17L22D6RA61 530 aa21.78■■□□□ 1.08
SOX2-201ENST00000325404 USP17L17D6RBQ6 530 aa21.78■■□□□ 1.08
SOX2-201ENST00000325404 USP17L19D6RCP7 530 aa21.78■■□□□ 1.08
SOX2-201ENST00000325404 USP17L20D6RJB6 530 aa21.78■■□□□ 1.08
SOX2-201ENST00000325404 EIF3HO15372 352 aaKnown RBP eCLIP21.78■■□□□ 1.08
SOX2-201ENST00000325404 SLC16A3O15427 465 aaKnown RBP21.78■■□□□ 1.08
SOX2-201ENST00000325404 HEXIM1O94992 359 aaKnown RBP21.78■■□□□ 1.08
SOX2-201ENST00000325404 FOSP01100 380 aaPredicted RBP21.78■■□□□ 1.08
SOX2-201ENST00000325404 AFPP02771 609 aaKnown RBP21.78■■□□□ 1.08
SOX2-201ENST00000325404 USP17L24Q0WX57 530 aa21.78■■□□□ 1.08
SOX2-201ENST00000325404 USP17L6PQ6QN14 398 aa21.78■■□□□ 1.08
SOX2-201ENST00000325404 TEX2Q8IWB9 1127 aa21.78■■□□□ 1.08
SOX2-201ENST00000325404 FAM133AQ8N9E0 248 aa21.78■■□□□ 1.08
SOX2-201ENST00000325404 USP38Q8NB14 1042 aa21.78■■□□□ 1.08
SOX2-201ENST00000325404 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP21.78■■□□□ 1.08
SOX2-201ENST00000325404 DNM3Q9UQ16 869 aa21.78■■□□□ 1.08
SOX2-201ENST00000325404 ZNF646O15015 1829 aaPredicted RBP21.78■■□□□ 1.08
SOX2-201ENST00000325404 KIF13BQ9NQT8 1826 aa21.78■■□□□ 1.08
SOX2-201ENST00000325404 TAF4BQ92750 862 aa21.77■■□□□ 1.08
SOX2-201ENST00000325404 IDI2Q9BXS1 227 aa21.77■■□□□ 1.08
SOX2-201ENST00000325404 MEIS2O14770 477 aa21.77■■□□□ 1.08
SOX2-201ENST00000325404 MMP14P50281 582 aa21.77■■□□□ 1.08
SOX2-201ENST00000325404 CATSPER3Q86XQ3 398 aa21.77■■□□□ 1.08
SOX2-201ENST00000325404 CCDC125Q86Z20 511 aa21.77■■□□□ 1.08
SOX2-201ENST00000325404 KANSL2Q9H9L4 492 aa21.77■■□□□ 1.08
SOX2-201ENST00000325404 INTUQ9ULD6 942 aa21.77■■□□□ 1.08
SOX2-201ENST00000325404 MPHOSPH10O00566 681 aaKnown RBP21.76■■□□□ 1.07
SOX2-201ENST00000325404 FTCDO95954 541 aa21.76■■□□□ 1.07
SOX2-201ENST00000325404 UCHL3P15374 230 aa21.76■■□□□ 1.07
SOX2-201ENST00000325404 CACNB3P54284 484 aa21.76■■□□□ 1.07
SOX2-201ENST00000325404 ARHGAP4P98171 946 aa21.76■■□□□ 1.07
SOX2-201ENST00000325404 PPP1R3FQ6ZSY5 799 aaPredicted RBP21.76■■□□□ 1.07
SOX2-201ENST00000325404 CALR3Q96L12 384 aaKnown RBP21.76■■□□□ 1.07
SOX2-201ENST00000325404 EPB41L5Q9HCM4 733 aa21.76■■□□□ 1.07
SOX2-201ENST00000325404 NENFQ9UMX5 172 aa21.76■■□□□ 1.07
SOX2-201ENST00000325404 GTPBP10A4D1E9 387 aaKnown RBP21.76■■□□□ 1.07
SOX2-201ENST00000325404 RPL13P26373 211 aaKnown RBP21.76■■□□□ 1.07
SOX2-201ENST00000325404 CARSP49589 748 aaKnown RBP21.76■■□□□ 1.07
SOX2-201ENST00000325404 RPS6KA1Q15418 735 aa21.76■■□□□ 1.07
SOX2-201ENST00000325404 TTMPQ5BVD1 217 aa21.76■■□□□ 1.07
SOX2-201ENST00000325404 CFAP58Q5T655 872 aa21.76■■□□□ 1.07
SOX2-201ENST00000325404 EFCAB13Q8IY85 973 aa21.76■■□□□ 1.07
SOX2-201ENST00000325404 LARGE2Q8N3Y3 721 aa21.76■■□□□ 1.07
SOX2-201ENST00000325404 ACTRT1Q8TDG2 376 aa21.76■■□□□ 1.07
SOX2-201ENST00000325404 ZIM3Q96PE6 472 aa21.76■■□□□ 1.07
SOX2-201ENST00000325404 GRIN2DO15399 1336 aa21.75■■□□□ 1.07
SOX2-201ENST00000325404 A0A0A6YYK5 440 aaPredicted RBP21.75■■□□□ 1.07
SOX2-201ENST00000325404 NPM3O75607 178 aaKnown RBP21.75■■□□□ 1.07
SOX2-201ENST00000325404 CIITAP33076 1130 aa21.75■■□□□ 1.07
SOX2-201ENST00000325404 GUCY2DQ02846 1103 aa21.75■■□□□ 1.07
SOX2-201ENST00000325404 PTK2Q05397 1052 aa21.75■■□□□ 1.07
SOX2-201ENST00000325404 EXOC3L4Q17RC7 722 aa21.75■■□□□ 1.07
SOX2-201ENST00000325404 ZFPM1Q8IX07 1006 aa21.75■■□□□ 1.07
SOX2-201ENST00000325404 TYW1Q9NV66 732 aaKnown RBP21.75■■□□□ 1.07
SOX2-201ENST00000325404 POTEFA5A3E0 1075 aa21.75■■□□□ 1.07
SOX2-201ENST00000325404 GFPT2O94808 682 aa21.75■■□□□ 1.07
SOX2-201ENST00000325404 POTEIP0CG38 1075 aa21.75■■□□□ 1.07
SOX2-201ENST00000325404 SPATA31C1P0DKV0 1188 aa21.75■■□□□ 1.07
SOX2-201ENST00000325404 TCP10Q12799 353 aa21.75■■□□□ 1.07
SOX2-201ENST00000325404 POTEGQ6S5H5 508 aa21.75■■□□□ 1.07
SOX2-201ENST00000325404 POTEEQ6S8J3 1075 aa21.75■■□□□ 1.07
SOX2-201ENST00000325404 PPM1EQ8WY54 764 aa21.75■■□□□ 1.07
SOX2-201ENST00000325404 HINFPQ9BQA5 517 aa21.75■■□□□ 1.07
SOX2-201ENST00000325404 TRIM34Q9BYJ4 488 aa21.75■■□□□ 1.07
SOX2-201ENST00000325404 FAM198AQ9UFP1 575 aa21.75■■□□□ 1.07
SOX2-201ENST00000325404 NFU1Q9UMS0 254 aa21.75■■□□□ 1.07
SOX2-201ENST00000325404 BHMG1C9JSJ3 638 aaPredicted RBP21.74■■□□□ 1.07
SOX2-201ENST00000325404 ZBTB7AO95365 584 aa21.74■■□□□ 1.07
SOX2-201ENST00000325404 XRCC5P13010 732 aaKnown RBP21.74■■□□□ 1.07
SOX2-201ENST00000325404 PON1P27169 355 aa21.74■■□□□ 1.07
SOX2-201ENST00000325404 SREBF1P36956 1147 aa21.74■■□□□ 1.07
SOX2-201ENST00000325404 EPHA7Q15375 998 aa21.74■■□□□ 1.07
SOX2-201ENST00000325404 NFIL3Q16649 462 aa21.74■■□□□ 1.07
SOX2-201ENST00000325404 SLFN13Q68D06 897 aa21.74■■□□□ 1.07
SOX2-201ENST00000325404 ZNF571Q7Z3V5 609 aaPredicted RBP21.74■■□□□ 1.07
SOX2-201ENST00000325404 GPIHBP1Q8IV16 184 aa21.74■■□□□ 1.07
SOX2-201ENST00000325404 LRRC57Q8N9N7 239 aa21.74■■□□□ 1.07
SOX2-201ENST00000325404 SCFD2Q8WU76 684 aa21.74■■□□□ 1.07
SOX2-201ENST00000325404 ARL8AQ96BM9 186 aa21.74■■□□□ 1.07
SOX2-201ENST00000325404 SPAG5Q96R06 1193 aa21.74■■□□□ 1.07
SOX2-201ENST00000325404 POLR3CQ9BUI4 534 aaPredicted RBP21.74■■□□□ 1.07
SOX2-201ENST00000325404 AMNQ9BXJ7 453 aa21.74■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms