RNA–Protein interactions for RNA: ENST00000324340.13

DDX39A-202, Transcript of DExD-box helicase 39A, humanhuman

TSL 1 (best)

Gene DDX39A, Length 1,355 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-202ENST00000324340 C4orf19Q8IY42 314 aa14.19□□□□□ -0.14
DDX39A-202ENST00000324340 BANK1Q8NDB2 785 aa14.19□□□□□ -0.14
DDX39A-202ENST00000324340 NPLOC4Q8TAT6 608 aa14.19□□□□□ -0.14
DDX39A-202ENST00000324340 SOCS4Q8WXH5 440 aa14.19□□□□□ -0.14
DDX39A-202ENST00000324340 NACC1Q96RE7 527 aa14.19□□□□□ -0.14
DDX39A-202ENST00000324340 NAT10Q9H0A0 1025 aaKnown RBP14.19□□□□□ -0.14
DDX39A-202ENST00000324340 BCAS3Q9H6U6 928 aa14.19□□□□□ -0.14
DDX39A-202ENST00000324340 GJD2Q9UKL4 321 aa14.19□□□□□ -0.14
DDX39A-202ENST00000324340 SAMM50Q9Y512 469 aa14.19□□□□□ -0.14
DDX39A-202ENST00000324340 IGKV6D-21A0A0A0MT36 114 aa14.18□□□□□ -0.14
DDX39A-202ENST00000324340 ARIH2O95376 493 aa14.18□□□□□ -0.14
DDX39A-202ENST00000324340 PSAPP07602 524 aa14.18□□□□□ -0.14
DDX39A-202ENST00000324340 PSMC5P62195 406 aa14.18□□□□□ -0.14
DDX39A-202ENST00000324340 NCBP1Q09161 790 aaKnown RBP14.18□□□□□ -0.14
DDX39A-202ENST00000324340 KMT5BQ4FZB7 885 aa14.18□□□□□ -0.14
DDX39A-202ENST00000324340 TAPT1Q6NXT6 567 aa14.18□□□□□ -0.14
DDX39A-202ENST00000324340 METTL7BQ6UX53 244 aa14.18□□□□□ -0.14
DDX39A-202ENST00000324340 UNC13DQ70J99 1090 aa14.18□□□□□ -0.14
DDX39A-202ENST00000324340 CYFIP1Q7L576 1253 aa14.18□□□□□ -0.14
DDX39A-202ENST00000324340 FBXO16Q8IX29 292 aaPredicted RBP14.18□□□□□ -0.14
DDX39A-202ENST00000324340 SCFD2Q8WU76 684 aa14.18□□□□□ -0.14
DDX39A-202ENST00000324340 DDX12PQ92771 950 aa14.18□□□□□ -0.14
DDX39A-202ENST00000324340 DNAJC19Q96DA6 116 aa14.18□□□□□ -0.14
DDX39A-202ENST00000324340 TINF2Q9BSI4 451 aa14.18□□□□□ -0.14
DDX39A-202ENST00000324340 CBX8Q9HC52 389 aa14.18□□□□□ -0.14
DDX39A-202ENST00000324340 CDKN2AIPQ9NXV6 580 aaPredicted RBP14.18□□□□□ -0.14
DDX39A-202ENST00000324340 DBR1Q9UK59 544 aaKnown RBP14.18□□□□□ -0.14
DDX39A-202ENST00000324340 FRMD3A2A2Y4 597 aa14.17□□□□□ -0.14
DDX39A-202ENST00000324340 TNPO2O14787 897 aaKnown RBP14.17□□□□□ -0.14
DDX39A-202ENST00000324340 SUPT20HL2P0C7V6 817 aa14.17□□□□□ -0.14
DDX39A-202ENST00000324340 CTGFP29279 349 aa14.17□□□□□ -0.14
DDX39A-202ENST00000324340 ASIC1P78348 528 aa14.17□□□□□ -0.14
DDX39A-202ENST00000324340 EHHADHQ08426 723 aa14.17□□□□□ -0.14
DDX39A-202ENST00000324340 DHX8Q14562 1220 aaKnown RBP14.17□□□□□ -0.14
DDX39A-202ENST00000324340 TTLL4Q14679 1199 aa14.17□□□□□ -0.14
DDX39A-202ENST00000324340 IQCB1Q15051 598 aa14.17□□□□□ -0.14
DDX39A-202ENST00000324340 UGCGQ16739 394 aa14.17□□□□□ -0.14
DDX39A-202ENST00000324340 ARSHQ5FYA8 562 aa14.17□□□□□ -0.14
DDX39A-202ENST00000324340 CELF3Q5SZQ8 465 aaKnown RBP14.17□□□□□ -0.14
DDX39A-202ENST00000324340 ZNF658Q5TYW1 1059 aaPredicted RBP14.17□□□□□ -0.14
DDX39A-202ENST00000324340 OLFML2BQ68BL8 750 aa14.17□□□□□ -0.14
DDX39A-202ENST00000324340 ISM2Q6H9L7 571 aa14.17□□□□□ -0.14
DDX39A-202ENST00000324340 MIS18BP1Q6P0N0 1132 aa14.17□□□□□ -0.14
DDX39A-202ENST00000324340 ZNF397Q8NF99 534 aaPredicted RBP14.17□□□□□ -0.14
DDX39A-202ENST00000324340 BHMT2Q9H2M3 363 aa14.17□□□□□ -0.14
DDX39A-202ENST00000324340 ABHD16BQ9H3Z7 469 aa14.17□□□□□ -0.14
DDX39A-202ENST00000324340 KCND2Q9NZV8 630 aa14.17□□□□□ -0.14
DDX39A-202ENST00000324340 DACH1Q9UI36 760 aa14.17□□□□□ -0.14
DDX39A-202ENST00000324340 IGSF9BQ9UPX0 1349 aa14.16□□□□□ -0.14
DDX39A-202ENST00000324340 DKC1O60832 514 aaKnown RBP eCLIP14.16□□□□□ -0.14
DDX39A-202ENST00000324340 GGPS1O95749 300 aa14.16□□□□□ -0.14
DDX39A-202ENST00000324340 RGS2P41220 211 aa14.16□□□□□ -0.14
DDX39A-202ENST00000324340 VEGFBP49765 207 aa14.16□□□□□ -0.14
DDX39A-202ENST00000324340 FCGRTP55899 365 aa14.16□□□□□ -0.14
DDX39A-202ENST00000324340 LACTBP83111 547 aaPredicted RBP14.16□□□□□ -0.14
DDX39A-202ENST00000324340 LY6KQ17RY6 165 aa14.16□□□□□ -0.14
DDX39A-202ENST00000324340 COBLL1Q53SF7 1204 aa14.16□□□□□ -0.14
DDX39A-202ENST00000324340 GPBP1Q86WP2 473 aa14.16□□□□□ -0.14
DDX39A-202ENST00000324340 PIGOQ8TEQ8 1089 aa14.16□□□□□ -0.14
DDX39A-202ENST00000324340 ATP6V0A1Q93050 837 aa14.16□□□□□ -0.14
DDX39A-202ENST00000324340 CCDC47Q96A33 483 aaKnown RBP14.16□□□□□ -0.14
DDX39A-202ENST00000324340 APBA2Q99767 749 aa14.16□□□□□ -0.14
DDX39A-202ENST00000324340 ARID3AQ99856 593 aa14.16□□□□□ -0.14
DDX39A-202ENST00000324340 PDGFCQ9NRA1 345 aa14.16□□□□□ -0.14
DDX39A-202ENST00000324340 BMP2KQ9NSY1 1161 aaPredicted RBP14.16□□□□□ -0.14
DDX39A-202ENST00000324340 TELO2Q9Y4R8 837 aa14.16□□□□□ -0.14
DDX39A-202ENST00000324340 DOCK3Q8IZD9 2030 aa14.15□□□□□ -0.14
DDX39A-202ENST00000324340 GSTTP1A0A1W2PQM5 241 aa14.15□□□□□ -0.14
DDX39A-202ENST00000324340 SPDYE4A6NLX3 237 aa14.15□□□□□ -0.14
DDX39A-202ENST00000324340 KIF2AO00139 706 aaPredicted RBP14.15□□□□□ -0.14
DDX39A-202ENST00000324340 ZBTB39O15060 712 aa14.15□□□□□ -0.14
DDX39A-202ENST00000324340 STBD1O95210 358 aa14.15□□□□□ -0.14
DDX39A-202ENST00000324340 SSBP05455 408 aaKnown RBP eCLIP14.15□□□□□ -0.14
DDX39A-202ENST00000324340 TXNP10599 105 aaKnown RBP14.15□□□□□ -0.14
DDX39A-202ENST00000324340 ERCC5P28715 1186 aaPredicted RBP14.15□□□□□ -0.14
DDX39A-202ENST00000324340 PSMD2Q13200 908 aa14.15□□□□□ -0.14
DDX39A-202ENST00000324340 GIT2Q14161 759 aa14.15□□□□□ -0.14
DDX39A-202ENST00000324340 RINT1Q6NUQ1 792 aa14.15□□□□□ -0.14
DDX39A-202ENST00000324340 C1orf186Q6ZWK4 172 aa14.15□□□□□ -0.14
DDX39A-202ENST00000324340 DYMQ7RTS9 669 aa14.15□□□□□ -0.14
DDX39A-202ENST00000324340 LUZP1Q86V48 1076 aa14.15□□□□□ -0.14
DDX39A-202ENST00000324340 CCDC60Q8IWA6 550 aaPredicted RBP14.15□□□□□ -0.14
DDX39A-202ENST00000324340 DHX40Q8IX18 779 aaKnown RBP14.15□□□□□ -0.14
DDX39A-202ENST00000324340 KIF18AQ8NI77 898 aa14.15□□□□□ -0.14
DDX39A-202ENST00000324340 AFAP1L1Q8TED9 768 aa14.15□□□□□ -0.14
DDX39A-202ENST00000324340 SEPT1Q8WYJ6 367 aa14.15□□□□□ -0.14
DDX39A-202ENST00000324340 EMID1Q96A84 441 aaPredicted RBP14.15□□□□□ -0.14
DDX39A-202ENST00000324340 ANKEF1Q9NU02 776 aa14.15□□□□□ -0.14
DDX39A-202ENST00000324340 RNF186Q9NXI6 227 aa14.15□□□□□ -0.14
DDX39A-202ENST00000324340 GABBR1Q9UBS5 961 aa14.15□□□□□ -0.14
DDX39A-202ENST00000324340 MAFBQ9Y5Q3 323 aaPredicted RBP14.15□□□□□ -0.14
DDX39A-202ENST00000324340 ZSWIM8A7E2V4 1837 aa14.15□□□□□ -0.14
DDX39A-202ENST00000324340 ARID2Q68CP9 1835 aa14.14□□□□□ -0.15
DDX39A-202ENST00000324340 PPP1R3GB7ZBB8 358 aa14.14□□□□□ -0.15
DDX39A-202ENST00000324340 IKBKBO14920 756 aa14.14□□□□□ -0.15
DDX39A-202ENST00000324340 ZNF862O60290 1169 aa14.14□□□□□ -0.15
DDX39A-202ENST00000324340 TUBB4AP04350 444 aa14.14□□□□□ -0.15
DDX39A-202ENST00000324340 XRCC5P13010 732 aaKnown RBP14.14□□□□□ -0.15
DDX39A-202ENST00000324340 YWHABP31946 246 aaKnown RBP14.14□□□□□ -0.15
DDX39A-202ENST00000324340 RARRES1P49788 294 aa14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms