RNA–Protein interactions for RNA: ENST00000320876.10

SMCHD1-201, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMCHD1, Length 8,821 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-201ENST00000320876 NRBP2Q9NSY0 501 aa18.09■□□□□ 0.49
SMCHD1-201ENST00000320876 KPNA7A9QM74 516 aa18.09■□□□□ 0.49
SMCHD1-201ENST00000320876 STAMBPL1Q96FJ0 436 aa18.09■□□□□ 0.49
SMCHD1-201ENST00000320876 ECT2Q9H8V3 914 aa18.09■□□□□ 0.49
SMCHD1-201ENST00000320876 TRIP13Q15645 432 aaPredicted RBP18.08■□□□□ 0.49
SMCHD1-201ENST00000320876 CHCHD3Q9NX63 227 aaKnown RBP18.08■□□□□ 0.49
SMCHD1-201ENST00000320876 LZICQ8WZA0 190 aa18.08■□□□□ 0.49
SMCHD1-201ENST00000320876 ZNF229Q9UJW7 825 aa18.08■□□□□ 0.49
SMCHD1-201ENST00000320876 ASPSCR1Q9BZE9 553 aa18.08■□□□□ 0.49
SMCHD1-201ENST00000320876 GIMAP4Q9NUV9 329 aa18.08■□□□□ 0.49
SMCHD1-201ENST00000320876 SLC4A1P02730 911 aa18.08■□□□□ 0.48
SMCHD1-201ENST00000320876 COPS2P61201 443 aa18.08■□□□□ 0.48
SMCHD1-201ENST00000320876 KLHL38Q2WGJ6 581 aa18.08■□□□□ 0.48
SMCHD1-201ENST00000320876 CERKLQ49MI3 558 aaPredicted RBP18.08■□□□□ 0.48
SMCHD1-201ENST00000320876 TRPC1P48995 793 aa18.08■□□□□ 0.48
SMCHD1-201ENST00000320876 PPP2R2AP63151 447 aa18.08■□□□□ 0.48
SMCHD1-201ENST00000320876 GPATCH4Q5T3I0 446 aaKnown RBP18.08■□□□□ 0.48
SMCHD1-201ENST00000320876 LRRC47Q8N1G4 583 aaKnown RBP18.08■□□□□ 0.48
SMCHD1-201ENST00000320876 SLC7A3Q8WY07 619 aa18.08■□□□□ 0.48
SMCHD1-201ENST00000320876 WDR64B1ANS9 1081 aa18.08■□□□□ 0.48
SMCHD1-201ENST00000320876 H0YIN7 160 aa18.08■□□□□ 0.48
SMCHD1-201ENST00000320876 RYBPQ8N488 228 aaPredicted RBP18.08■□□□□ 0.48
SMCHD1-201ENST00000320876 PI4K2BQ8TCG2 481 aa18.08■□□□□ 0.48
SMCHD1-201ENST00000320876 ZNF212Q9UDV6 495 aa18.08■□□□□ 0.48
SMCHD1-201ENST00000320876 MAP3K19Q56UN5 1328 aa18.08■□□□□ 0.48
SMCHD1-201ENST00000320876 DONSONQ9NYP3 566 aa18.08■□□□□ 0.48
SMCHD1-201ENST00000320876 SOX5P35711 763 aa18.07■□□□□ 0.48
SMCHD1-201ENST00000320876 PODNQ7Z5L7 613 aa18.07■□□□□ 0.48
SMCHD1-201ENST00000320876 ZNF577Q9BSK1 485 aa18.07■□□□□ 0.48
SMCHD1-201ENST00000320876 SKOR1P84550 965 aa18.07■□□□□ 0.48
SMCHD1-201ENST00000320876 PARVGQ9HBI0 331 aa18.07■□□□□ 0.48
SMCHD1-201ENST00000320876 TTC17Q96AE7 1141 aa18.07■□□□□ 0.48
SMCHD1-201ENST00000320876 KMT5AQ9NQR1 393 aa18.07■□□□□ 0.48
SMCHD1-201ENST00000320876 THRAP3Q9Y2W1 955 aaKnown RBP18.07■□□□□ 0.48
SMCHD1-201ENST00000320876 NFKBIAP25963 317 aa18.07■□□□□ 0.48
SMCHD1-201ENST00000320876 WDR62O43379 1518 aa18.07■□□□□ 0.48
SMCHD1-201ENST00000320876 GCP02774 474 aa18.07■□□□□ 0.48
SMCHD1-201ENST00000320876 EP400NLQ6ZTU2 488 aa18.07■□□□□ 0.48
SMCHD1-201ENST00000320876 SDR42E1Q8WUS8 393 aa18.07■□□□□ 0.48
SMCHD1-201ENST00000320876 SNX19Q92543 992 aa18.07■□□□□ 0.48
SMCHD1-201ENST00000320876 BTBD6Q96KE9 485 aa18.07■□□□□ 0.48
SMCHD1-201ENST00000320876 NACC1Q96RE7 527 aa18.07■□□□□ 0.48
SMCHD1-201ENST00000320876 MAGED2Q9UNF1 606 aaPredicted RBP18.07■□□□□ 0.48
SMCHD1-201ENST00000320876 IL13P35225 146 aa18.07■□□□□ 0.48
SMCHD1-201ENST00000320876 MIS18BP1Q6P0N0 1132 aa18.07■□□□□ 0.48
SMCHD1-201ENST00000320876 H0Y626 953 aa18.06■□□□□ 0.48
SMCHD1-201ENST00000320876 COBLO75128 1261 aa18.06■□□□□ 0.48
SMCHD1-201ENST00000320876 TRIM16O95361 564 aa18.06■□□□□ 0.48
SMCHD1-201ENST00000320876 PSMD7P51665 324 aa18.06■□□□□ 0.48
SMCHD1-201ENST00000320876 CYP4A11Q02928 519 aa18.06■□□□□ 0.48
SMCHD1-201ENST00000320876 GAS2L3Q86XJ1 694 aa18.06■□□□□ 0.48
SMCHD1-201ENST00000320876 LARGE2Q8N3Y3 721 aa18.06■□□□□ 0.48
SMCHD1-201ENST00000320876 KLC4Q9NSK0 619 aa18.06■□□□□ 0.48
SMCHD1-201ENST00000320876 TRAF3IP3Q9Y228 551 aa18.06■□□□□ 0.48
SMCHD1-201ENST00000320876 MMP1P03956 469 aa18.06■□□□□ 0.48
SMCHD1-201ENST00000320876 MAGOHP61326 146 aaKnown RBP18.06■□□□□ 0.48
SMCHD1-201ENST00000320876 IRX1P78414 480 aaPredicted RBP18.06■□□□□ 0.48
SMCHD1-201ENST00000320876 MKRN3Q13064 507 aaKnown RBP18.06■□□□□ 0.48
SMCHD1-201ENST00000320876 PDCLQ13371 301 aa18.06■□□□□ 0.48
SMCHD1-201ENST00000320876 TBCCQ15814 346 aa18.06■□□□□ 0.48
SMCHD1-201ENST00000320876 LSG1Q9H089 658 aaKnown RBP18.06■□□□□ 0.48
SMCHD1-201ENST00000320876 USP40Q9NVE5 1235 aa18.06■□□□□ 0.48
SMCHD1-201ENST00000320876 GRID2IPA4D2P6 1211 aa18.06■□□□□ 0.48
SMCHD1-201ENST00000320876 SEMA3EO15041 775 aa18.06■□□□□ 0.48
SMCHD1-201ENST00000320876 NIM1KQ8IY84 436 aa18.06■□□□□ 0.48
SMCHD1-201ENST00000320876 CCNL1Q9UK58 526 aaPredicted RBP18.06■□□□□ 0.48
SMCHD1-201ENST00000320876 GOLGA8SH3BPF8 625 aa18.06■□□□□ 0.48
SMCHD1-201ENST00000320876 STXBP3O00186 592 aa18.06■□□□□ 0.48
SMCHD1-201ENST00000320876 AP1B1Q10567 949 aa18.06■□□□□ 0.48
SMCHD1-201ENST00000320876 SSH3Q8TE77 659 aa18.06■□□□□ 0.48
SMCHD1-201ENST00000320876 KDM5CP41229 1560 aa18.06■□□□□ 0.48
SMCHD1-201ENST00000320876 RNF103-CHMP3A0A140T963 221 aa18.06■□□□□ 0.48
SMCHD1-201ENST00000320876 ARHGEF37A1IGU5 675 aa18.06■□□□□ 0.48
SMCHD1-201ENST00000320876 ICA1Q05084 483 aa18.06■□□□□ 0.48
SMCHD1-201ENST00000320876 METTL23Q86XA0 190 aa18.06■□□□□ 0.48
SMCHD1-201ENST00000320876 CDC26Q8NHZ8 85 aa18.06■□□□□ 0.48
SMCHD1-201ENST00000320876 GINM1Q9NU53 330 aa18.06■□□□□ 0.48
SMCHD1-201ENST00000320876 PALD1Q9ULE6 856 aa18.06■□□□□ 0.48
SMCHD1-201ENST00000320876 KAT6AQ92794 2004 aa18.06■□□□□ 0.48
SMCHD1-201ENST00000320876 MFAP3LO75121 409 aa18.06■□□□□ 0.48
SMCHD1-201ENST00000320876 EFTUD2Q15029 972 aaKnown RBP eCLIP18.06■□□□□ 0.482e-7■■■■□ 25.8
SMCHD1-201ENST00000320876 FAF2Q96CS3 445 aa18.06■□□□□ 0.48
SMCHD1-201ENST00000320876 SRGAP2CP0DJJ0 459 aa18.06■□□□□ 0.48
SMCHD1-201ENST00000320876 CARD14Q9BXL6 1004 aa18.06■□□□□ 0.48
SMCHD1-201ENST00000320876 SNX2O60749 519 aa18.05■□□□□ 0.48
SMCHD1-201ENST00000320876 ALAS1P13196 640 aa18.05■□□□□ 0.48
SMCHD1-201ENST00000320876 AARSP49588 968 aaKnown RBP eCLIP18.05■□□□□ 0.484e-6■■■■□ 24
SMCHD1-201ENST00000320876 SAYSD1Q9NPB0 183 aa18.05■□□□□ 0.48
SMCHD1-201ENST00000320876 CSADQ9Y600 493 aa18.05■□□□□ 0.48
SMCHD1-201ENST00000320876 TSPOAP1O95153 1857 aa18.05■□□□□ 0.48
SMCHD1-201ENST00000320876 PSMA2P25787 234 aa18.05■□□□□ 0.48
SMCHD1-201ENST00000320876 TEX9Q8N6V9 391 aa18.05■□□□□ 0.48
SMCHD1-201ENST00000320876 RBM41Q96IZ5 413 aaKnown RBP18.05■□□□□ 0.48
SMCHD1-201ENST00000320876 NR1H4Q96RI1 486 aaPredicted RBP18.05■□□□□ 0.48
SMCHD1-201ENST00000320876 HABP4Q5JVS0 413 aaKnown RBP18.05■□□□□ 0.48
SMCHD1-201ENST00000320876 SIX6OS1Q8N1H7 587 aa18.05■□□□□ 0.48
SMCHD1-201ENST00000320876 SCG3Q8WXD2 468 aaKnown RBP18.05■□□□□ 0.48
SMCHD1-201ENST00000320876 FSD1LQ9BXM9 530 aa18.05■□□□□ 0.48
SMCHD1-201ENST00000320876 TTLL1O95922 423 aa18.05■□□□□ 0.48
SMCHD1-201ENST00000320876 BBS9Q3SYG4 887 aa18.05■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms