RNA–Protein interactions for RNA: ENST00000319533.9

RPP40-201, Transcript of ribonuclease P/MRP subunit p40, humanhuman

TSL 1 (best) BASIC

Gene RPP40, Length 1,088 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPP40-201ENST00000319533 CMTR2Q8IYT2 770 aaKnown RBP16.26■□□□□ 0.19
RPP40-201ENST00000319533 CCDC82Q8N4S0 544 aa16.26■□□□□ 0.19
RPP40-201ENST00000319533 CYP2W1Q8TAV3 490 aa16.26■□□□□ 0.19
RPP40-201ENST00000319533 ZBTB10Q96DT7 871 aa16.26■□□□□ 0.19
RPP40-201ENST00000319533 AZI2Q9H6S1 392 aa16.26■□□□□ 0.19
RPP40-201ENST00000319533 RIC8AQ9NPQ8 531 aa16.26■□□□□ 0.19
RPP40-201ENST00000319533 PLAGL2Q9UPG8 496 aa16.26■□□□□ 0.19
RPP40-201ENST00000319533 TRPV2Q9Y5S1 764 aa16.26■□□□□ 0.19
RPP40-201ENST00000319533 CNTNAP5Q8WYK1 1306 aa16.25■□□□□ 0.19
RPP40-201ENST00000319533 IGKV6D-21A0A0A0MT36 114 aa16.25■□□□□ 0.19
RPP40-201ENST00000319533 SMIM35A0A1B0GVV1 85 aa16.25■□□□□ 0.19
RPP40-201ENST00000319533 MEIS1O00470 390 aa16.25■□□□□ 0.19
RPP40-201ENST00000319533 DCXO43602 365 aa16.25■□□□□ 0.19
RPP40-201ENST00000319533 FOSP01100 380 aaPredicted RBP16.25■□□□□ 0.19
RPP40-201ENST00000319533 STAT5BP51692 787 aa16.25■□□□□ 0.19
RPP40-201ENST00000319533 IGBP1P78318 339 aa16.25■□□□□ 0.19
RPP40-201ENST00000319533 SMAD2Q15796 467 aaKnown RBP16.25■□□□□ 0.19
RPP40-201ENST00000319533 CEP55Q53EZ4 464 aa16.25■□□□□ 0.19
RPP40-201ENST00000319533 TYW1BQ6NUM6 668 aa16.25■□□□□ 0.19
RPP40-201ENST00000319533 RAB11FIP4Q86YS3 637 aa16.25■□□□□ 0.19
RPP40-201ENST00000319533 NME8Q8N427 588 aa16.25■□□□□ 0.19
RPP40-201ENST00000319533 LRRC2Q9BYS8 371 aa16.25■□□□□ 0.19
RPP40-201ENST00000319533 CELF4Q9BZC1 486 aaKnown RBP16.25■□□□□ 0.19
RPP40-201ENST00000319533 PADI3Q9ULW8 664 aa16.25■□□□□ 0.19
RPP40-201ENST00000319533 MRPL42Q9Y6G3 142 aaKnown RBP16.25■□□□□ 0.19
RPP40-201ENST00000319533 MBTPS2O43462 519 aa16.24■□□□□ 0.19
RPP40-201ENST00000319533 ARP10275 920 aa16.24■□□□□ 0.19
RPP40-201ENST00000319533 SLC26A2P50443 739 aa16.24■□□□□ 0.19
RPP40-201ENST00000319533 DLX2Q07687 328 aaPredicted RBP16.24■□□□□ 0.19
RPP40-201ENST00000319533 ITGB3BPQ13352 177 aaPredicted RBP16.24■□□□□ 0.19
RPP40-201ENST00000319533 APOA5Q6Q788 366 aa16.24■□□□□ 0.19
RPP40-201ENST00000319533 NIPA1Q7RTP0 329 aa16.24■□□□□ 0.19
RPP40-201ENST00000319533 MICU3Q86XE3 530 aa16.24■□□□□ 0.19
RPP40-201ENST00000319533 SDF4Q9BRK5 362 aa16.24■□□□□ 0.19
RPP40-201ENST00000319533 FAM49AQ9H0Q0 323 aaPredicted RBP16.24■□□□□ 0.19
RPP40-201ENST00000319533 AGO4Q9HCK5 861 aaKnown RBP16.24■□□□□ 0.19
RPP40-201ENST00000319533 RBM28Q9NW13 759 aaKnown RBP16.24■□□□□ 0.19
RPP40-201ENST00000319533 TRPC6Q9Y210 931 aa16.24■□□□□ 0.19
RPP40-201ENST00000319533 hCG_1984214I3L0E3 225 aa16.23■□□□□ 0.19
RPP40-201ENST00000319533 M0QZ92 97 aa16.23■□□□□ 0.19
RPP40-201ENST00000319533 TBX10O75333 385 aa16.23■□□□□ 0.19
RPP40-201ENST00000319533 STAG3L1P0CL83 205 aa16.23■□□□□ 0.19
RPP40-201ENST00000319533 DNAJB1P25685 340 aa16.23■□□□□ 0.19
RPP40-201ENST00000319533 SREBF1P36956 1147 aa16.23■□□□□ 0.19
RPP40-201ENST00000319533 CLK2P49760 499 aaKnown RBP16.23■□□□□ 0.19
RPP40-201ENST00000319533 EXOSC10Q01780 885 aaKnown RBP16.23■□□□□ 0.19
RPP40-201ENST00000319533 ADAM15Q13444 863 aa16.23■□□□□ 0.19
RPP40-201ENST00000319533 SMAD4Q13485 552 aaKnown RBP16.23■□□□□ 0.19
RPP40-201ENST00000319533 MTHFD1LQ6UB35 978 aa16.23■□□□□ 0.19
RPP40-201ENST00000319533 SYNE3Q6ZMZ3 975 aa16.23■□□□□ 0.19
RPP40-201ENST00000319533 EP400NLQ6ZTU2 488 aa16.23■□□□□ 0.19
RPP40-201ENST00000319533 ZNF713Q8N859 430 aaPredicted RBP16.23■□□□□ 0.19
RPP40-201ENST00000319533 SPPL3Q8TCT6 385 aa16.23■□□□□ 0.19
RPP40-201ENST00000319533 TRAPPC12Q8WVT3 735 aa16.23■□□□□ 0.19
RPP40-201ENST00000319533 UPF3BQ9BZI7 483 aaKnown RBP16.23■□□□□ 0.19
RPP40-201ENST00000319533 TMX1Q9H3N1 280 aa16.23■□□□□ 0.19
RPP40-201ENST00000319533 ALG13Q9NP73 1137 aaKnown RBP16.23■□□□□ 0.19
RPP40-201ENST00000319533 STXBP3O00186 592 aa16.22■□□□□ 0.19
RPP40-201ENST00000319533 ITGB1P05556 798 aa16.22■□□□□ 0.19
RPP40-201ENST00000319533 SCG2P13521 617 aa16.22■□□□□ 0.19
RPP40-201ENST00000319533 GTF2F1P35269 517 aaKnown RBP eCLIP16.22■□□□□ 0.19
RPP40-201ENST00000319533 IRS1P35568 1242 aa16.22■□□□□ 0.19
RPP40-201ENST00000319533 ADCY7P51828 1080 aa16.22■□□□□ 0.19
RPP40-201ENST00000319533 NAPAP54920 295 aa16.22■□□□□ 0.19
RPP40-201ENST00000319533 PAK2Q13177 524 aa16.22■□□□□ 0.19
RPP40-201ENST00000319533 AP3B2Q13367 1082 aa16.22■□□□□ 0.19
RPP40-201ENST00000319533 TSGA10IPQ3SY00 556 aa16.22■□□□□ 0.19
RPP40-201ENST00000319533 ABHD15Q6UXT9 468 aa16.22■□□□□ 0.19
RPP40-201ENST00000319533 MSLNLQ96KJ4 702 aa16.22■□□□□ 0.19
RPP40-201ENST00000319533 POP1Q99575 1024 aaKnown RBP16.22■□□□□ 0.19
RPP40-201ENST00000319533 ANO3Q9BYT9 981 aa16.22■□□□□ 0.19
RPP40-201ENST00000319533 GLT8D2Q9H1C3 349 aa16.22■□□□□ 0.19
RPP40-201ENST00000319533 BARHL2Q9NY43 387 aa16.22■□□□□ 0.19
RPP40-201ENST00000319533 BRPF3Q9ULD4 1205 aa16.22■□□□□ 0.19
RPP40-201ENST00000319533 C5orf42Q9H799 3197 aa16.22■□□□□ 0.19
RPP40-201ENST00000319533 KIAA1671Q9BY89 1806 aa16.22■□□□□ 0.19
RPP40-201ENST00000319533 LOXHD1Q8IVV2 1947 aa16.21■□□□□ 0.19
RPP40-201ENST00000319533 LINC01565O15544 149 aa16.21■□□□□ 0.19
RPP40-201ENST00000319533 HBP1O60381 514 aa16.21■□□□□ 0.19
RPP40-201ENST00000319533 EYA4O95677 639 aa16.21■□□□□ 0.19
RPP40-201ENST00000319533 CCNE2O96020 404 aa16.21■□□□□ 0.19
RPP40-201ENST00000319533 RCAN1P53805 252 aa16.21■□□□□ 0.19
RPP40-201ENST00000319533 KRT76Q01546 638 aa16.21■□□□□ 0.19
RPP40-201ENST00000319533 TMEM62Q0P6H9 643 aa16.21■□□□□ 0.19
RPP40-201ENST00000319533 BMP2KLQ5H9B9 411 aa16.21■□□□□ 0.19
RPP40-201ENST00000319533 RNF20Q5VTR2 975 aa16.21■□□□□ 0.19
RPP40-201ENST00000319533 KLHL23Q8NBE8 558 aa16.21■□□□□ 0.19
RPP40-201ENST00000319533 CRYGNQ8WXF5 182 aa16.21■□□□□ 0.19
RPP40-201ENST00000319533 PGBD1Q96JS3 809 aa16.21■□□□□ 0.19
RPP40-201ENST00000319533 NEK1Q96PY6 1258 aa16.21■□□□□ 0.19
RPP40-201ENST00000319533 KCNH6Q9H252 994 aa16.21■□□□□ 0.19
RPP40-201ENST00000319533 ANO2Q9NQ90 1003 aa16.21■□□□□ 0.19
RPP40-201ENST00000319533 FAM217BQ9NTX9 383 aaPredicted RBP16.21■□□□□ 0.19
RPP40-201ENST00000319533 CD207Q9UJ71 328 aa16.21■□□□□ 0.19
RPP40-201ENST00000319533 V9GY48 417 aaPredicted RBP16.21■□□□□ 0.19
RPP40-201ENST00000319533 COL1A2P08123 1366 aa16.21■□□□□ 0.19
RPP40-201ENST00000319533 SMCO2A6NFE2 343 aa16.2■□□□□ 0.18
RPP40-201ENST00000319533 DHX15O43143 795 aaKnown RBP16.2■□□□□ 0.18
RPP40-201ENST00000319533 ZBTB43O43298 467 aa16.2■□□□□ 0.18
RPP40-201ENST00000319533 KLRC1P26715 233 aa16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms