RNA–Protein interactions for RNA: ENST00000317233.8

AFF3-201, Transcript of AF4/FMR2 family member 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene AFF3, Length 8,135 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AFF3-201ENST00000317233 PARP10Q53GL7 1025 aa14.1□□□□□ -0.15
AFF3-201ENST00000317233 CDR2LQ86X02 465 aaPredicted RBP14.1□□□□□ -0.15
AFF3-201ENST00000317233 HEXIM2Q96MH2 286 aaKnown RBP14.1□□□□□ -0.15
AFF3-201ENST00000317233 BCL2L14Q9BZR8 327 aa14.1□□□□□ -0.15
AFF3-201ENST00000317233 NSMCE4AQ9NXX6 385 aa14.1□□□□□ -0.15
AFF3-201ENST00000317233 TNNQ9UQP3 1299 aa14.1□□□□□ -0.15
AFF3-201ENST00000317233 PCDHA5Q9Y5H7 936 aa14.1□□□□□ -0.15
AFF3-201ENST00000317233 GOLGA8JA6NMD2 632 aa14.1□□□□□ -0.15
AFF3-201ENST00000317233 C11orf95C9JLR9 678 aaPredicted RBP14.1□□□□□ -0.15
AFF3-201ENST00000317233 DEAF1O75398 565 aaPredicted RBP14.1□□□□□ -0.15
AFF3-201ENST00000317233 GPR1P46091 355 aa14.1□□□□□ -0.15
AFF3-201ENST00000317233 POLA2Q14181 598 aa14.1□□□□□ -0.15
AFF3-201ENST00000317233 KLHL8Q9P2G9 620 aaPredicted RBP14.1□□□□□ -0.15
AFF3-201ENST00000317233 ADCY1Q08828 1119 aa14.09□□□□□ -0.15
AFF3-201ENST00000317233 SF3B3Q15393 1217 aaKnown RBP14.09□□□□□ -0.15
AFF3-201ENST00000317233 RNASE11Q8TAA1 199 aaKnown RBP14.09□□□□□ -0.15
AFF3-201ENST00000317233 E2F5Q15329 346 aa14.09□□□□□ -0.15
AFF3-201ENST00000317233 CERKLQ49MI3 558 aaPredicted RBP14.09□□□□□ -0.15
AFF3-201ENST00000317233 NXF1Q9UBU9 619 aaKnown RBP14.09□□□□□ -0.15
AFF3-201ENST00000317233 KPNA7A9QM74 516 aa14.09□□□□□ -0.15
AFF3-201ENST00000317233 PEX1O43933 1283 aa14.09□□□□□ -0.15
AFF3-201ENST00000317233 H2AFZP0C0S5 128 aa14.09□□□□□ -0.15
AFF3-201ENST00000317233 RALBP11234 206 aa14.09□□□□□ -0.15
AFF3-201ENST00000317233 ARHGAP17Q68EM7 881 aa14.09□□□□□ -0.15
AFF3-201ENST00000317233 H2AFVQ71UI9 128 aa14.09□□□□□ -0.15
AFF3-201ENST00000317233 FBXO11Q86XK2 927 aa14.09□□□□□ -0.15
AFF3-201ENST00000317233 NFATC2IPQ8NCF5 419 aa14.09□□□□□ -0.15
AFF3-201ENST00000317233 RPF1Q9H9Y2 349 aaKnown RBP14.09□□□□□ -0.15
AFF3-201ENST00000317233 MMEP08473 750 aa14.09□□□□□ -0.15
AFF3-201ENST00000317233 MFSD4BQ5TF39 518 aa14.09□□□□□ -0.15
AFF3-201ENST00000317233 ARMC6Q6NXE6 501 aa14.09□□□□□ -0.15
AFF3-201ENST00000317233 CENPUQ71F23 418 aa14.09□□□□□ -0.15
AFF3-201ENST00000317233 TTLL11Q8NHH1 800 aa14.09□□□□□ -0.15
AFF3-201ENST00000317233 ZNF304Q9HCX3 659 aa14.09□□□□□ -0.15
AFF3-201ENST00000317233 SPDYAQ5MJ70 313 aa14.09□□□□□ -0.15
AFF3-201ENST00000317233 CC2D1AQ6P1N0 951 aaPredicted RBP14.09□□□□□ -0.15
AFF3-201ENST00000317233 COG1Q8WTW3 980 aa14.09□□□□□ -0.15
AFF3-201ENST00000317233 BRIP1Q9BX63 1249 aa14.09□□□□□ -0.15
AFF3-201ENST00000317233 SUPT3HO75486 399 aa14.09□□□□□ -0.15
AFF3-201ENST00000317233 CUL4AQ13619 759 aa14.09□□□□□ -0.15
AFF3-201ENST00000317233 VGLL3A8MV65 326 aa14.09□□□□□ -0.15
AFF3-201ENST00000317233 CDH2P19022 906 aaPredicted RBP14.09□□□□□ -0.15
AFF3-201ENST00000317233 NCOA2Q15596 1464 aa14.09□□□□□ -0.15
AFF3-201ENST00000317233 KCTD16Q68DU8 428 aa14.09□□□□□ -0.15
AFF3-201ENST00000317233 DDX53Q86TM3 631 aaKnown RBP14.09□□□□□ -0.15
AFF3-201ENST00000317233 HSPH1Q92598 858 aa14.09□□□□□ -0.15
AFF3-201ENST00000317233 CNOT10Q9H9A5 744 aaKnown RBP14.09□□□□□ -0.15
AFF3-201ENST00000317233 NFU1Q9UMS0 254 aa14.09□□□□□ -0.15
AFF3-201ENST00000317233 ADAM9Q13443 819 aa14.08□□□□□ -0.15
AFF3-201ENST00000317233 USP39Q53GS9 565 aaKnown RBP14.08□□□□□ -0.15
AFF3-201ENST00000317233 TDRD7Q8NHU6 1098 aaKnown RBP14.08□□□□□ -0.15
AFF3-201ENST00000317233 INTS4Q96HW7 963 aaKnown RBP14.08□□□□□ -0.15
AFF3-201ENST00000317233 EML4Q9HC35 981 aaKnown RBP14.08□□□□□ -0.15
AFF3-201ENST00000317233 FYNP06241 537 aa14.08□□□□□ -0.16
AFF3-201ENST00000317233 COPB1P53618 953 aaKnown RBP14.08□□□□□ -0.16
AFF3-201ENST00000317233 AP2B1P63010 937 aa14.08□□□□□ -0.16
AFF3-201ENST00000317233 CCDC157Q569K6 752 aa14.08□□□□□ -0.16
AFF3-201ENST00000317233 PLA2G4DQ86XP0 818 aa14.08□□□□□ -0.16
AFF3-201ENST00000317233 PDIK1LQ8N165 341 aa14.08□□□□□ -0.16
AFF3-201ENST00000317233 BTBD6Q96KE9 485 aa14.08□□□□□ -0.16
AFF3-201ENST00000317233 EPN3Q9H201 632 aa14.08□□□□□ -0.16
AFF3-201ENST00000317233 KMT5AQ9NQR1 393 aa14.08□□□□□ -0.16
AFF3-201ENST00000317233 TROQ12816 1431 aaPredicted RBP14.08□□□□□ -0.16
AFF3-201ENST00000317233 FRMPD2Q68DX3 1309 aaPredicted RBP14.08□□□□□ -0.16
AFF3-201ENST00000317233 WASLO00401 505 aaPredicted RBP14.08□□□□□ -0.16
AFF3-201ENST00000317233 CAPN1P07384 714 aa14.08□□□□□ -0.16
AFF3-201ENST00000317233 RPS6KB1P23443 525 aa14.08□□□□□ -0.16
AFF3-201ENST00000317233 ADKP55263 362 aaKnown RBP14.08□□□□□ -0.16
AFF3-201ENST00000317233 SURF1Q15526 300 aa14.08□□□□□ -0.16
AFF3-201ENST00000317233 BICC1Q9H694 974 aaKnown RBP14.08□□□□□ -0.16
AFF3-201ENST00000317233 USP40Q9NVE5 1235 aa14.08□□□□□ -0.16
AFF3-201ENST00000317233 CTNND1O60716 968 aaKnown RBP14.08□□□□□ -0.16
AFF3-201ENST00000317233 ECEL1O95672 775 aa14.08□□□□□ -0.16
AFF3-201ENST00000317233 TSPY1Q01534 308 aa14.08□□□□□ -0.16
AFF3-201ENST00000317233 RASSF7Q02833 373 aa14.08□□□□□ -0.16
AFF3-201ENST00000317233 ADCK2Q7Z695 626 aa14.08□□□□□ -0.16
AFF3-201ENST00000317233 ACAP3Q96P50 834 aa14.08□□□□□ -0.16
AFF3-201ENST00000317233 SIKE1Q9BRV8 207 aa14.08□□□□□ -0.16
AFF3-201ENST00000317233 TSR3Q9UJK0 312 aaKnown RBP14.08□□□□□ -0.16
AFF3-201ENST00000317233 IL10P22301 178 aa14.08□□□□□ -0.16
AFF3-201ENST00000317233 POU5F1BQ06416 359 aa14.08□□□□□ -0.16
AFF3-201ENST00000317233 IARS2Q9NSE4 1012 aaKnown RBP14.08□□□□□ -0.16
AFF3-201ENST00000317233 PA2G4Q9UQ80 394 aaKnown RBP14.08□□□□□ -0.16
AFF3-201ENST00000317233 STON1Q9Y6Q2 735 aa14.08□□□□□ -0.16
AFF3-201ENST00000317233 FAM107AO95990 144 aa14.08□□□□□ -0.16
AFF3-201ENST00000317233 ITGA6P23229 1130 aa14.08□□□□□ -0.16
AFF3-201ENST00000317233 SLC16A1P53985 500 aa14.08□□□□□ -0.16
AFF3-201ENST00000317233 EHHADHQ08426 723 aa14.08□□□□□ -0.16
AFF3-201ENST00000317233 SH3BP5LQ7L8J4 393 aa14.08□□□□□ -0.16
AFF3-201ENST00000317233 ADNPQ9H2P0 1102 aa14.08□□□□□ -0.16
AFF3-201ENST00000317233 RNF14Q9UBS8 474 aa14.08□□□□□ -0.16
AFF3-201ENST00000317233 PI4K2BG5E9Z4 385 aa14.07□□□□□ -0.16
AFF3-201ENST00000317233 DARSP14868 501 aaKnown RBP14.07□□□□□ -0.16
AFF3-201ENST00000317233 MAPKAPK5Q8IW41 473 aa14.07□□□□□ -0.16
AFF3-201ENST00000317233 DIS3L2Q8IYB7 885 aaKnown RBP14.07□□□□□ -0.16
AFF3-201ENST00000317233 PSD3Q9NYI0 1048 aa14.07□□□□□ -0.16
AFF3-201ENST00000317233 MYH9P35579 1960 aaKnown RBP14.07□□□□□ -0.16
AFF3-201ENST00000317233 PALM2-AKAP2B1ALY0 433 aaPredicted RBP14.07□□□□□ -0.16
AFF3-201ENST00000317233 GOLGA8TH3BQL2 631 aa14.07□□□□□ -0.16
AFF3-201ENST00000317233 KLHL18O94889 574 aa14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms