RNA–Protein interactions for RNA: ENST00000315962.8

TRIM55-202, Transcript of tripartite motif containing 55, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM55, Length 2,914 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-202ENST00000315962 VGLL4Q14135 290 aa8.39□□□□□ -1.07
TRIM55-202ENST00000315962 GIT2Q14161 759 aa8.39□□□□□ -1.07
TRIM55-202ENST00000315962 C9orf131Q5VYM1 1079 aa8.39□□□□□ -1.07
TRIM55-202ENST00000315962 SCYL3Q8IZE3 742 aa8.39□□□□□ -1.07
TRIM55-202ENST00000315962 MYOCDQ8IZQ8 938 aa8.39□□□□□ -1.07
TRIM55-202ENST00000315962 SYTL5Q8TDW5 730 aaPredicted RBP8.39□□□□□ -1.07
TRIM55-202ENST00000315962 SCFD1Q8WVM8 642 aa8.39□□□□□ -1.07
TRIM55-202ENST00000315962 KLRG1Q96E93 195 aa8.39□□□□□ -1.07
TRIM55-202ENST00000315962 NT5C3AQ9H0P0 336 aa8.39□□□□□ -1.07
TRIM55-202ENST00000315962 SLC38A10Q9HBR0 1119 aa8.39□□□□□ -1.07
TRIM55-202ENST00000315962 LIMA1Q9UHB6 759 aaKnown RBP8.39□□□□□ -1.07
TRIM55-202ENST00000315962 RABGAP1Q9Y3P9 1069 aa8.39□□□□□ -1.07
TRIM55-202ENST00000315962 CCDC151A5D8V7 595 aa8.39□□□□□ -1.07
TRIM55-202ENST00000315962 TISP43B9A030 160 aa8.39□□□□□ -1.07
TRIM55-202ENST00000315962 POTEJP0CG39 1038 aa8.39□□□□□ -1.07
TRIM55-202ENST00000315962 ITGB3BPQ13352 177 aaPredicted RBP8.39□□□□□ -1.07
TRIM55-202ENST00000315962 MTMR1Q13613 665 aa8.39□□□□□ -1.07
TRIM55-202ENST00000315962 COG2Q14746 738 aa8.39□□□□□ -1.07
TRIM55-202ENST00000315962 TMEM132BQ14DG7 1078 aa8.39□□□□□ -1.07
TRIM55-202ENST00000315962 Q4G0T1 1027 aa8.39□□□□□ -1.07
TRIM55-202ENST00000315962 MIIPQ5JXC2 388 aa8.39□□□□□ -1.07
TRIM55-202ENST00000315962 WDR78Q5VTH9 848 aa8.39□□□□□ -1.07
TRIM55-202ENST00000315962 ARHGEF16Q5VV41 709 aa8.39□□□□□ -1.07
TRIM55-202ENST00000315962 HAUS3Q68CZ6 603 aa8.39□□□□□ -1.07
TRIM55-202ENST00000315962 RNF207Q6ZRF8 634 aa8.39□□□□□ -1.07
TRIM55-202ENST00000315962 KRT26Q7Z3Y9 468 aa8.39□□□□□ -1.07
TRIM55-202ENST00000315962 FAM160B2Q86V87 743 aa8.39□□□□□ -1.07
TRIM55-202ENST00000315962 DNAAF5Q86Y56 855 aa8.39□□□□□ -1.07
TRIM55-202ENST00000315962 MYCT1Q8N699 235 aa8.39□□□□□ -1.07
TRIM55-202ENST00000315962 DHTKD1Q96HY7 919 aaPredicted RBP8.39□□□□□ -1.07
TRIM55-202ENST00000315962 PAGR1Q9BTK6 254 aa8.39□□□□□ -1.07
TRIM55-202ENST00000315962 GLT8D2Q9H1C3 349 aa8.39□□□□□ -1.07
TRIM55-202ENST00000315962 FAM204AQ9H8W3 233 aa8.39□□□□□ -1.07
TRIM55-202ENST00000315962 ELP3Q9H9T3 547 aa8.39□□□□□ -1.07
TRIM55-202ENST00000315962 NLRC4Q9NPP4 1024 aa8.39□□□□□ -1.07
TRIM55-202ENST00000315962 PPP1R9AQ9ULJ8 1098 aa8.39□□□□□ -1.07
TRIM55-202ENST00000315962 USP20Q9Y2K6 914 aa8.39□□□□□ -1.07
TRIM55-202ENST00000315962 DUSP10Q9Y6W6 482 aa8.39□□□□□ -1.07
TRIM55-202ENST00000315962 CTAGE15A4D2H0 777 aa8.38□□□□□ -1.07
TRIM55-202ENST00000315962 RASSF10A6NK89 507 aa8.38□□□□□ -1.07
TRIM55-202ENST00000315962 PIK3CDO00329 1044 aa8.38□□□□□ -1.07
TRIM55-202ENST00000315962 IRF6O14896 467 aa8.38□□□□□ -1.07
TRIM55-202ENST00000315962 WDR46O15213 610 aaKnown RBP8.38□□□□□ -1.07
TRIM55-202ENST00000315962 PSMD10O75832 226 aa8.38□□□□□ -1.07
TRIM55-202ENST00000315962 ATP1A1P05023 1023 aaKnown RBP8.38□□□□□ -1.07
TRIM55-202ENST00000315962 CTAGE8P0CG41 777 aa8.38□□□□□ -1.07
TRIM55-202ENST00000315962 MYBL2P10244 700 aa8.38□□□□□ -1.07
TRIM55-202ENST00000315962 PBX1P40424 430 aa8.38□□□□□ -1.07
TRIM55-202ENST00000315962 MAP3K10Q02779 954 aa8.38□□□□□ -1.07
TRIM55-202ENST00000315962 LEKR1Q6ZMV7 388 aa8.38□□□□□ -1.07
TRIM55-202ENST00000315962 CTAGE6Q86UF2 777 aa8.38□□□□□ -1.07
TRIM55-202ENST00000315962 CTAGE4Q8IX94 777 aa8.38□□□□□ -1.07
TRIM55-202ENST00000315962 GPC2Q8N158 579 aa8.38□□□□□ -1.07
TRIM55-202ENST00000315962 HSD17B14Q9BPX1 270 aa8.38□□□□□ -1.07
TRIM55-202ENST00000315962 LXNQ9BS40 222 aa8.38□□□□□ -1.07
TRIM55-202ENST00000315962 RASSF4Q9H2L5 321 aa8.38□□□□□ -1.07
TRIM55-202ENST00000315962 GPRC5CQ9NQ84 441 aa8.38□□□□□ -1.07
TRIM55-202ENST00000315962 RNF146Q9NTX7 359 aa8.38□□□□□ -1.07
TRIM55-202ENST00000315962 ABHD10Q9NUJ1 306 aa8.38□□□□□ -1.07
TRIM55-202ENST00000315962 EHD2Q9NZN4 543 aa8.38□□□□□ -1.07
TRIM55-202ENST00000315962 MACROD2A1Z1Q3 448 aa8.38□□□□□ -1.07
TRIM55-202ENST00000315962 LRRC10BA6NIK2 292 aa8.38□□□□□ -1.07
TRIM55-202ENST00000315962 TPM1P09493 284 aa8.38□□□□□ -1.07
TRIM55-202ENST00000315962 NPEPPSP55786 919 aa8.38□□□□□ -1.07
TRIM55-202ENST00000315962 CNTN2Q02246 1040 aa8.38□□□□□ -1.07
TRIM55-202ENST00000315962 ADAM9Q13443 819 aa8.38□□□□□ -1.07
TRIM55-202ENST00000315962 CCDC40Q4G0X9 1142 aa8.38□□□□□ -1.07
TRIM55-202ENST00000315962 TCERG1LQ5VWI1 586 aa8.38□□□□□ -1.07
TRIM55-202ENST00000315962 PLA2G4FQ68DD2 849 aa8.38□□□□□ -1.07
TRIM55-202ENST00000315962 CENPPQ6IPU0 288 aa8.38□□□□□ -1.07
TRIM55-202ENST00000315962 SRLQ86TD4 932 aa8.38□□□□□ -1.07
TRIM55-202ENST00000315962 SULF1Q8IWU6 871 aa8.38□□□□□ -1.07
TRIM55-202ENST00000315962 ERMNQ8TAM6 284 aa8.38□□□□□ -1.07
TRIM55-202ENST00000315962 ELMO3Q96BJ8 720 aa8.38□□□□□ -1.07
TRIM55-202ENST00000315962 FAM20AQ96MK3 541 aa8.38□□□□□ -1.07
TRIM55-202ENST00000315962 MMS19Q96T76 1030 aa8.38□□□□□ -1.07
TRIM55-202ENST00000315962 PCDHB13Q9Y5F0 798 aa8.38□□□□□ -1.07
TRIM55-202ENST00000315962 MYH10P35580 1976 aa8.37□□□□□ -1.07
TRIM55-202ENST00000315962 PVALEFA0A1B0GWK0 134 aa8.37□□□□□ -1.07
TRIM55-202ENST00000315962 BICDL2A1A5D9 508 aa8.37□□□□□ -1.07
TRIM55-202ENST00000315962 LGALS16A8MUM7 142 aa8.37□□□□□ -1.07
TRIM55-202ENST00000315962 MAP2K7O14733 419 aa8.37□□□□□ -1.07
TRIM55-202ENST00000315962 ZBED4O75132 1171 aa8.37□□□□□ -1.07
TRIM55-202ENST00000315962 USP2O75604 605 aaPredicted RBP8.37□□□□□ -1.07
TRIM55-202ENST00000315962 MYL1P05976 194 aa8.37□□□□□ -1.07
TRIM55-202ENST00000315962 HOXD13P35453 343 aa8.37□□□□□ -1.07
TRIM55-202ENST00000315962 ACTN2P35609 894 aa8.37□□□□□ -1.07
TRIM55-202ENST00000315962 CASP4P49662 377 aa8.37□□□□□ -1.07
TRIM55-202ENST00000315962 UGCGQ16739 394 aa8.37□□□□□ -1.07
TRIM55-202ENST00000315962 DCAF17Q5H9S7 520 aaPredicted RBP8.37□□□□□ -1.07
TRIM55-202ENST00000315962 DCAF15Q66K64 600 aa8.37□□□□□ -1.07
TRIM55-202ENST00000315962 RINT1Q6NUQ1 792 aa8.37□□□□□ -1.07
TRIM55-202ENST00000315962 GADL1Q6ZQY3 521 aa8.37□□□□□ -1.07
TRIM55-202ENST00000315962 HDXQ7Z353 690 aa8.37□□□□□ -1.07
TRIM55-202ENST00000315962 CCDC65Q8IXS2 484 aa8.37□□□□□ -1.07
TRIM55-202ENST00000315962 LPAR1Q92633 364 aa8.37□□□□□ -1.07
TRIM55-202ENST00000315962 NAPGQ99747 312 aaPredicted RBP8.37□□□□□ -1.07
TRIM55-202ENST00000315962 LUC7L2Q9Y383 392 aaKnown RBP8.37□□□□□ -1.07
TRIM55-202ENST00000315962 GOLGA6L9A6NEM1 432 aa8.37□□□□□ -1.07
TRIM55-202ENST00000315962 NR2F2P24468 414 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms