RNA–Protein interactions for RNA: ENST00000315544.6

CNOT4-201, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 1 (best) BASIC

Gene CNOT4, Length 3,783 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-201ENST00000315544 SLC5A5Q92911 643 aa8.68□□□□□ -1.02
CNOT4-201ENST00000315544 RPGRIP1Q96KN7 1286 aa8.68□□□□□ -1.02
CNOT4-201ENST00000315544 FBXL18Q96ME1 805 aa8.68□□□□□ -1.02
CNOT4-201ENST00000315544 MLXIPQ9HAP2 919 aa8.68□□□□□ -1.02
CNOT4-201ENST00000315544 RRAGCQ9HB90 399 aa8.68□□□□□ -1.02
CNOT4-201ENST00000315544 CEP72Q9P209 647 aa8.68□□□□□ -1.02
CNOT4-201ENST00000315544 FAN1Q9Y2M0 1017 aa8.68□□□□□ -1.02
CNOT4-201ENST00000315544 EML1O00423 815 aa8.68□□□□□ -1.02
CNOT4-201ENST00000315544 TRIM66O15016 1216 aa8.68□□□□□ -1.02
CNOT4-201ENST00000315544 FSBPO95073 299 aa8.68□□□□□ -1.02
CNOT4-201ENST00000315544 ANXA13P27216 316 aa8.68□□□□□ -1.02
CNOT4-201ENST00000315544 IRAK1P51617 712 aa8.68□□□□□ -1.02
CNOT4-201ENST00000315544 TBC1D22AQ8WUA7 517 aa8.68□□□□□ -1.02
CNOT4-201ENST00000315544 PRKAG3Q9UGI9 489 aa8.68□□□□□ -1.02
CNOT4-201ENST00000315544 DACH1Q9UI36 760 aa8.68□□□□□ -1.02
CNOT4-201ENST00000315544 ENTPD3O75355 529 aa8.68□□□□□ -1.02
CNOT4-201ENST00000315544 KLRC1P26715 233 aa8.68□□□□□ -1.02
CNOT4-201ENST00000315544 CALML3P27482 149 aa8.68□□□□□ -1.02
CNOT4-201ENST00000315544 GJA5P36382 358 aa8.68□□□□□ -1.02
CNOT4-201ENST00000315544 SLC1A4P43007 532 aa8.68□□□□□ -1.02
CNOT4-201ENST00000315544 HSD17B4P51659 736 aa8.68□□□□□ -1.02
CNOT4-201ENST00000315544 STX17P56962 302 aa8.68□□□□□ -1.02
CNOT4-201ENST00000315544 GPR162Q16538 588 aa8.68□□□□□ -1.02
CNOT4-201ENST00000315544 USP17L2Q6R6M4 530 aa8.68□□□□□ -1.02
CNOT4-201ENST00000315544 CATSPER3Q86XQ3 398 aa8.68□□□□□ -1.02
CNOT4-201ENST00000315544 CERS3Q8IU89 383 aa8.68□□□□□ -1.02
CNOT4-201ENST00000315544 NIM1KQ8IY84 436 aa8.68□□□□□ -1.02
CNOT4-201ENST00000315544 PIGSQ96S52 555 aa8.68□□□□□ -1.02
CNOT4-201ENST00000315544 MAF1Q9H063 256 aa8.68□□□□□ -1.02
CNOT4-201ENST00000315544 CYLDQ9NQC7 956 aa8.68□□□□□ -1.02
CNOT4-201ENST00000315544 INTUQ9ULD6 942 aa8.68□□□□□ -1.02
CNOT4-201ENST00000315544 COQ4Q9Y3A0 265 aa8.68□□□□□ -1.02
CNOT4-201ENST00000315544 CCT6AP40227 531 aaKnown RBP8.67□□□□□ -1.02
CNOT4-201ENST00000315544 AFMP43652 599 aa8.67□□□□□ -1.02
CNOT4-201ENST00000315544 USP11P51784 963 aa8.67□□□□□ -1.02
CNOT4-201ENST00000315544 GNG11P61952 73 aa8.67□□□□□ -1.02
CNOT4-201ENST00000315544 KCNA1Q09470 495 aa8.67□□□□□ -1.02
CNOT4-201ENST00000315544 KLF1Q13351 362 aaPredicted RBP8.67□□□□□ -1.02
CNOT4-201ENST00000315544 CDC37Q16543 378 aaPredicted RBP8.67□□□□□ -1.02
CNOT4-201ENST00000315544 EPC2Q52LR7 807 aa8.67□□□□□ -1.02
CNOT4-201ENST00000315544 WLSQ5T9L3 541 aa8.67□□□□□ -1.02
CNOT4-201ENST00000315544 CDC42EP5Q6NZY7 148 aa8.67□□□□□ -1.02
CNOT4-201ENST00000315544 CATIPQ7Z7H3 387 aa8.67□□□□□ -1.02
CNOT4-201ENST00000315544 CCDC24Q8N4L8 307 aa8.67□□□□□ -1.02
CNOT4-201ENST00000315544 GJA10Q969M2 543 aa8.67□□□□□ -1.02
CNOT4-201ENST00000315544 FAM212AQ96EL1 285 aa8.67□□□□□ -1.02
CNOT4-201ENST00000315544 C12orf42Q96LP6 360 aa8.67□□□□□ -1.02
CNOT4-201ENST00000315544 ISCUQ9H1K1 167 aa8.67□□□□□ -1.02
CNOT4-201ENST00000315544 KAT14Q9H8E8 782 aa8.67□□□□□ -1.02
CNOT4-201ENST00000315544 SMARCAL1Q9NZC9 954 aa8.67□□□□□ -1.02
CNOT4-201ENST00000315544 AKAP3O75969 853 aa8.67□□□□□ -1.02
CNOT4-201ENST00000315544 PTMAP06454 111 aaKnown RBP8.67□□□□□ -1.02
CNOT4-201ENST00000315544 KRT9P35527 623 aa8.67□□□□□ -1.02
CNOT4-201ENST00000315544 MAP2K2P36507 400 aa8.67□□□□□ -1.02
CNOT4-201ENST00000315544 KIF11P52732 1056 aa8.67□□□□□ -1.02
CNOT4-201ENST00000315544 GLE1Q53GS7 698 aaKnown RBP8.67□□□□□ -1.02
CNOT4-201ENST00000315544 DUPD1Q68J44 220 aa8.67□□□□□ -1.02
CNOT4-201ENST00000315544 SCARA3Q6AZY7 606 aa8.67□□□□□ -1.02
CNOT4-201ENST00000315544 UBE2Q1Q7Z7E8 422 aa8.67□□□□□ -1.02
CNOT4-201ENST00000315544 NEK8Q86SG6 692 aa8.67□□□□□ -1.02
CNOT4-201ENST00000315544 USP38Q8NB14 1042 aa8.67□□□□□ -1.02
CNOT4-201ENST00000315544 MZB1Q8WU39 189 aa8.67□□□□□ -1.02
CNOT4-201ENST00000315544 DDX12PQ92771 950 aa8.67□□□□□ -1.02
CNOT4-201ENST00000315544 GPR101Q96P66 508 aaPredicted RBP8.67□□□□□ -1.02
CNOT4-201ENST00000315544 SLF1Q9BQI6 1058 aa8.67□□□□□ -1.02
CNOT4-201ENST00000315544 POLR3CQ9BUI4 534 aaPredicted RBP8.67□□□□□ -1.02
CNOT4-201ENST00000315544 NUP58Q9BVL2 599 aa8.67□□□□□ -1.02
CNOT4-201ENST00000315544 RANBP17Q9H2T7 1088 aaKnown RBP8.67□□□□□ -1.02
CNOT4-201ENST00000315544 SCN8AQ9UQD0 1980 aa8.67□□□□□ -1.02
CNOT4-201ENST00000315544 KLRF2D3W0D1 207 aa8.67□□□□□ -1.02
CNOT4-201ENST00000315544 MCM7P33993 719 aa8.67□□□□□ -1.02
CNOT4-201ENST00000315544 SAFBQ15424 915 aaKnown RBP eCLIP8.67□□□□□ -1.02
CNOT4-201ENST00000315544 OTOP1Q7RTM1 612 aa8.67□□□□□ -1.02
CNOT4-201ENST00000315544 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP8.67□□□□□ -1.025e-8■■■■■ 65.3
CNOT4-201ENST00000315544 WDR83Q9BRX9 315 aaKnown RBP8.67□□□□□ -1.02
CNOT4-201ENST00000315544 PLAC1Q9HBJ0 212 aa8.67□□□□□ -1.02
CNOT4-201ENST00000315544 ERVK-5Q9HDB9 667 aa8.67□□□□□ -1.02
CNOT4-201ENST00000315544 LRWD1Q9UFC0 647 aa8.67□□□□□ -1.02
CNOT4-201ENST00000315544 MCM3APO60318 1980 aa8.66□□□□□ -1.02
CNOT4-201ENST00000315544 ASTN2O75129 1339 aaPredicted RBP8.66□□□□□ -1.02
CNOT4-201ENST00000315544 PNMA6FA0A0J9YX94 578 aa8.66□□□□□ -1.02
CNOT4-201ENST00000315544 DCDC2CA8MYV0 355 aa8.66□□□□□ -1.02
CNOT4-201ENST00000315544 ENC1O14682 589 aa8.66□□□□□ -1.02
CNOT4-201ENST00000315544 LRRN2O75325 713 aa8.66□□□□□ -1.02
CNOT4-201ENST00000315544 MUTP22033 750 aa8.66□□□□□ -1.02
CNOT4-201ENST00000315544 DRG2P55039 364 aaKnown RBP8.66□□□□□ -1.02
CNOT4-201ENST00000315544 SPAG1Q07617 926 aa8.66□□□□□ -1.02
CNOT4-201ENST00000315544 NFIAQ12857 509 aa8.66□□□□□ -1.02
CNOT4-201ENST00000315544 TAZQ16635 292 aa8.66□□□□□ -1.02
CNOT4-201ENST00000315544 MAN2A1Q16706 1144 aa8.66□□□□□ -1.02
CNOT4-201ENST00000315544 CLEC16AQ2KHT3 1053 aa8.66□□□□□ -1.02
CNOT4-201ENST00000315544 NFRKBQ6P4R8 1299 aa8.66□□□□□ -1.02
CNOT4-201ENST00000315544 PIGWQ7Z7B1 504 aa8.66□□□□□ -1.02
CNOT4-201ENST00000315544 CLEC4DQ8WXI8 215 aa8.66□□□□□ -1.02
CNOT4-201ENST00000315544 LZTFL1Q9NQ48 299 aa8.66□□□□□ -1.02
CNOT4-201ENST00000315544 FAM184BQ9ULE4 1060 aa8.66□□□□□ -1.02
CNOT4-201ENST00000315544 KIAA1024Q9UPX6 916 aa8.66□□□□□ -1.02
CNOT4-201ENST00000315544 NYNRINQ9P2P1 1898 aaKnown RBP8.66□□□□□ -1.02
CNOT4-201ENST00000315544 DDTLA6NHG4 134 aaPredicted RBP8.66□□□□□ -1.02
CNOT4-201ENST00000315544 POTEMA6NI47 508 aa8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms