RNA–Protein interactions for RNA: ENST00000314289.12

RNF4-201, Transcript of ring finger protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF4, Length 3,088 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-201ENST00000314289 POLR3CQ9BUI4 534 aaPredicted RBP13.69□□□□□ -0.22
RNF4-201ENST00000314289 NUP58Q9BVL2 599 aa13.69□□□□□ -0.22
RNF4-201ENST00000314289 KIAA1683Q9H0B3 1180 aa13.69□□□□□ -0.22
RNF4-201ENST00000314289 GGA3Q9NZ52 723 aa13.69□□□□□ -0.22
RNF4-201ENST00000314289 PCDHB13Q9Y5F0 798 aa13.69□□□□□ -0.22
RNF4-201ENST00000314289 EFCAB8A8MWE9 144 aa13.68□□□□□ -0.22
RNF4-201ENST00000314289 FAM13AO94988 1023 aa13.68□□□□□ -0.22
RNF4-201ENST00000314289 POLR2FP61218 127 aaKnown RBP13.68□□□□□ -0.22
RNF4-201ENST00000314289 KNOP1Q1ED39 458 aaKnown RBP13.68□□□□□ -0.22
RNF4-201ENST00000314289 CCDC42Q96M95 316 aa13.68□□□□□ -0.22
RNF4-201ENST00000314289 LSM14BQ9BX40 385 aaKnown RBP13.68□□□□□ -0.22
RNF4-201ENST00000314289 SLC38A10Q9HBR0 1119 aa13.68□□□□□ -0.22
RNF4-201ENST00000314289 PITPNM2Q9BZ72 1349 aa13.68□□□□□ -0.22
RNF4-201ENST00000314289 FZD9O00144 591 aa13.68□□□□□ -0.22
RNF4-201ENST00000314289 HSD17B4P51659 736 aa13.68□□□□□ -0.22
RNF4-201ENST00000314289 SP4Q02446 784 aa13.68□□□□□ -0.22
RNF4-201ENST00000314289 TRAF1Q13077 416 aa13.68□□□□□ -0.22
RNF4-201ENST00000314289 ITGB3BPQ13352 177 aaPredicted RBP13.68□□□□□ -0.22
RNF4-201ENST00000314289 MEA1Q16626 185 aa13.68□□□□□ -0.22
RNF4-201ENST00000314289 ARHGAP27Q6ZUM4 889 aa13.68□□□□□ -0.22
RNF4-201ENST00000314289 SYTL5Q8TDW5 730 aaPredicted RBP13.68□□□□□ -0.22
RNF4-201ENST00000314289 DRC1Q96MC2 740 aa13.68□□□□□ -0.22
RNF4-201ENST00000314289 TEKT3Q9BXF9 490 aa13.68□□□□□ -0.22
RNF4-201ENST00000314289 TESPA1A2RU30 521 aaPredicted RBP13.67□□□□□ -0.22
RNF4-201ENST00000314289 SRGAP2O75044 1071 aa13.67□□□□□ -0.22
RNF4-201ENST00000314289 ATP9AO75110 1047 aa13.67□□□□□ -0.22
RNF4-201ENST00000314289 AKAP3O75969 853 aa13.67□□□□□ -0.22
RNF4-201ENST00000314289 EIF4A3P38919 411 aaKnown RBP13.67□□□□□ -0.22
RNF4-201ENST00000314289 PPP2R5CQ13362 524 aa13.67□□□□□ -0.22
RNF4-201ENST00000314289 DEF6Q9H4E7 631 aa13.67□□□□□ -0.22
RNF4-201ENST00000314289 PPP1R9AQ9ULJ8 1098 aa13.67□□□□□ -0.22
RNF4-201ENST00000314289 CTAGE9A4FU28 777 aa13.67□□□□□ -0.22
RNF4-201ENST00000314289 CETN3O15182 167 aa13.67□□□□□ -0.22
RNF4-201ENST00000314289 TBC1D8O95759 1140 aa13.67□□□□□ -0.22
RNF4-201ENST00000314289 RPS12P25398 132 aaKnown RBP13.67□□□□□ -0.22
RNF4-201ENST00000314289 KCNH2Q12809 1159 aa13.67□□□□□ -0.22
RNF4-201ENST00000314289 C1orf186Q6ZWK4 172 aa13.67□□□□□ -0.22
RNF4-201ENST00000314289 RETREG2Q8NC44 543 aa13.67□□□□□ -0.22
RNF4-201ENST00000314289 EHMT1Q9H9B1 1298 aa13.67□□□□□ -0.22
RNF4-201ENST00000314289 CENPFP49454 3210 aa13.67□□□□□ -0.22
RNF4-201ENST00000314289 PLA2G6O60733 806 aa13.67□□□□□ -0.22
RNF4-201ENST00000314289 FAM193AP78312 1265 aa13.67□□□□□ -0.22
RNF4-201ENST00000314289 SMC1AQ14683 1233 aaKnown RBP13.67□□□□□ -0.22
RNF4-201ENST00000314289 TDRD12Q587J7 1177 aaKnown RBP13.67□□□□□ -0.22
RNF4-201ENST00000314289 CC2D1AQ6P1N0 951 aaPredicted RBP13.67□□□□□ -0.22
RNF4-201ENST00000314289 MIER3Q7Z3K6 550 aa13.67□□□□□ -0.22
RNF4-201ENST00000314289 DNAAF5Q86Y56 855 aa13.67□□□□□ -0.22
RNF4-201ENST00000314289 TRIM59Q8IWR1 403 aa13.67□□□□□ -0.22
RNF4-201ENST00000314289 RDH13Q8NBN7 331 aa13.67□□□□□ -0.22
RNF4-201ENST00000314289 LPAR1Q92633 364 aa13.67□□□□□ -0.22
RNF4-201ENST00000314289 JAKMIP2Q96AA8 810 aa13.67□□□□□ -0.22
RNF4-201ENST00000314289 RMDN3Q96TC7 470 aa13.67□□□□□ -0.22
RNF4-201ENST00000314289 NOL4O94818 638 aa13.66□□□□□ -0.22
RNF4-201ENST00000314289 PTPRAP18433 802 aa13.66□□□□□ -0.22
RNF4-201ENST00000314289 SLC9A1P19634 815 aa13.66□□□□□ -0.22
RNF4-201ENST00000314289 HIRAP54198 1017 aaPredicted RBP13.66□□□□□ -0.22
RNF4-201ENST00000314289 GFPT1Q06210 699 aaPredicted RBP13.66□□□□□ -0.22
RNF4-201ENST00000314289 MTMR1Q13613 665 aa13.66□□□□□ -0.22
RNF4-201ENST00000314289 TKFCQ3LXA3 575 aa13.66□□□□□ -0.22
RNF4-201ENST00000314289 BAP1Q92560 729 aa13.66□□□□□ -0.22
RNF4-201ENST00000314289 SGIP1Q9BQI5 828 aa13.66□□□□□ -0.22
RNF4-201ENST00000314289 PICK1Q9NRD5 415 aa13.66□□□□□ -0.22
RNF4-201ENST00000314289 TELO2Q9Y4R8 837 aa13.66□□□□□ -0.22
RNF4-201ENST00000314289 ASTN1O14525 1302 aa13.66□□□□□ -0.22
RNF4-201ENST00000314289 VWA5AO00534 786 aa13.66□□□□□ -0.22
RNF4-201ENST00000314289 AKR1B10O60218 316 aa13.66□□□□□ -0.22
RNF4-201ENST00000314289 IPO7O95373 1038 aaKnown RBP13.66□□□□□ -0.22
RNF4-201ENST00000314289 CYLC1P35663 651 aaPredicted RBP13.66□□□□□ -0.22
RNF4-201ENST00000314289 BACE1P56817 501 aa13.66□□□□□ -0.22
RNF4-201ENST00000314289 BAATQ14032 418 aaPredicted RBP13.66□□□□□ -0.22
RNF4-201ENST00000314289 ODR4Q5SWX8 454 aa13.66□□□□□ -0.22
RNF4-201ENST00000314289 RNF207Q6ZRF8 634 aa13.66□□□□□ -0.22
RNF4-201ENST00000314289 FBXO41Q8TF61 875 aa13.66□□□□□ -0.22
RNF4-201ENST00000314289 RNF216Q9NWF9 866 aaPredicted RBP13.66□□□□□ -0.22
RNF4-201ENST00000314289 PLAGL2Q9UPG8 496 aa13.66□□□□□ -0.22
RNF4-201ENST00000314289 POLR2AP24928 1970 aaKnown RBP13.66□□□□□ -0.22
RNF4-201ENST00000314289 BRCA1P38398 1863 aaKnown RBP13.65□□□□□ -0.22
RNF4-201ENST00000314289 TISP43B9A030 160 aa13.65□□□□□ -0.22
RNF4-201ENST00000314289 NR3C1P04150 777 aa13.65□□□□□ -0.22
RNF4-201ENST00000314289 EPM2AIP1Q7L775 607 aaPredicted RBP13.65□□□□□ -0.22
RNF4-201ENST00000314289 CNKSR2Q8WXI2 1034 aa13.65□□□□□ -0.22
RNF4-201ENST00000314289 TUFT1Q9NNX1 390 aa13.65□□□□□ -0.22
RNF4-201ENST00000314289 ARFGAP3Q9NP61 516 aa13.65□□□□□ -0.22
RNF4-201ENST00000314289 ATP1A1P05023 1023 aaKnown RBP13.65□□□□□ -0.22
RNF4-201ENST00000314289 CYP2J2P51589 502 aa13.65□□□□□ -0.22
RNF4-201ENST00000314289 KIF11P52732 1056 aa13.65□□□□□ -0.22
RNF4-201ENST00000314289 RAPGEF1Q13905 1077 aa13.65□□□□□ -0.22
RNF4-201ENST00000314289 UGCGQ16739 394 aa13.65□□□□□ -0.22
RNF4-201ENST00000314289 SNRNP48Q6IEG0 339 aaKnown RBP13.65□□□□□ -0.22
RNF4-201ENST00000314289 SCYL3Q8IZE3 742 aa13.65□□□□□ -0.22
RNF4-201ENST00000314289 TXLNBQ8N3L3 684 aa13.65□□□□□ -0.22
RNF4-201ENST00000314289 ZNF280CQ8ND82 737 aa13.65□□□□□ -0.22
RNF4-201ENST00000314289 CAPZA3Q96KX2 299 aa13.65□□□□□ -0.22
RNF4-201ENST00000314289 CEP63Q96MT8 703 aa13.65□□□□□ -0.22
RNF4-201ENST00000314289 NAPGQ99747 312 aaPredicted RBP13.65□□□□□ -0.22
RNF4-201ENST00000314289 MLXIPQ9HAP2 919 aa13.65□□□□□ -0.22
RNF4-201ENST00000314289 PARVGQ9HBI0 331 aa13.65□□□□□ -0.22
RNF4-201ENST00000314289 RNF146Q9NTX7 359 aa13.65□□□□□ -0.22
RNF4-201ENST00000314289 ARMCX3Q9UH62 379 aaPredicted RBP13.65□□□□□ -0.22
RNF4-201ENST00000314289 ARHGEF35A5YM69 484 aa13.65□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms