RNA–Protein interactions for RNA: ENST00000309862.10

PGAP3-202, Transcript of post-GPI attachment to proteins 3, humanhuman

TSL 2

Gene PGAP3, Length 3,028 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGAP3-202ENST00000309862 LINC00116Q8NCU8 138 aa16.86■□□□□ 0.29
PGAP3-202ENST00000309862 WDR66Q8TBY9 1149 aa16.86■□□□□ 0.29
PGAP3-202ENST00000309862 IKZF4Q9H2S9 585 aa16.86■□□□□ 0.29
PGAP3-202ENST00000309862 ZNF287Q9HBT7 754 aa16.86■□□□□ 0.29
PGAP3-202ENST00000309862 ARMCX3Q9UH62 379 aaPredicted RBP16.86■□□□□ 0.29
PGAP3-202ENST00000309862 ROBO3Q96MS0 1386 aa16.85■□□□□ 0.29
PGAP3-202ENST00000309862 PPP1R11O60927 126 aaPredicted RBP16.85■□□□□ 0.29
PGAP3-202ENST00000309862 GNA14O95837 355 aa16.85■□□□□ 0.29
PGAP3-202ENST00000309862 ABCB4P21439 1286 aa16.85■□□□□ 0.29
PGAP3-202ENST00000309862 PON1P27169 355 aa16.85■□□□□ 0.29
PGAP3-202ENST00000309862 SCTRP47872 440 aa16.85■□□□□ 0.29
PGAP3-202ENST00000309862 BIRC3Q13489 604 aa16.85■□□□□ 0.29
PGAP3-202ENST00000309862 USP17L15C9J2P7 530 aa16.85■□□□□ 0.29
PGAP3-202ENST00000309862 USP17L13C9JLJ4 530 aa16.85■□□□□ 0.29
PGAP3-202ENST00000309862 USP17L11C9JVI0 530 aa16.85■□□□□ 0.29
PGAP3-202ENST00000309862 USP17L18D6R9N7 530 aa16.85■□□□□ 0.29
PGAP3-202ENST00000309862 USP17L22D6RA61 530 aa16.85■□□□□ 0.29
PGAP3-202ENST00000309862 USP17L17D6RBQ6 530 aa16.85■□□□□ 0.29
PGAP3-202ENST00000309862 USP17L19D6RCP7 530 aa16.85■□□□□ 0.29
PGAP3-202ENST00000309862 USP17L20D6RJB6 530 aa16.85■□□□□ 0.29
PGAP3-202ENST00000309862 CAND2O75155 1236 aa16.85■□□□□ 0.29
PGAP3-202ENST00000309862 SHBGP04278 402 aa16.85■□□□□ 0.29
PGAP3-202ENST00000309862 CYP11B2P19099 503 aa16.85■□□□□ 0.29
PGAP3-202ENST00000309862 USP17L24Q0WX57 530 aa16.85■□□□□ 0.29
PGAP3-202ENST00000309862 PICALMQ13492 652 aa16.85■□□□□ 0.29
PGAP3-202ENST00000309862 SNCBQ16143 134 aa16.85■□□□□ 0.29
PGAP3-202ENST00000309862 USP17L6PQ6QN14 398 aa16.85■□□□□ 0.29
PGAP3-202ENST00000309862 SETDB2Q96T68 719 aa16.85■□□□□ 0.29
PGAP3-202ENST00000309862 RTFDC1Q9BY42 306 aaPredicted RBP16.85■□□□□ 0.29
PGAP3-202ENST00000309862 ESYT2A0FGR8 921 aa16.84■□□□□ 0.29
PGAP3-202ENST00000309862 F8VZ95 297 aa16.84■□□□□ 0.29
PGAP3-202ENST00000309862 CLIC2O15247 247 aa16.84■□□□□ 0.29
PGAP3-202ENST00000309862 GFPT2O94808 682 aa16.84■□□□□ 0.29
PGAP3-202ENST00000309862 CASP4P49662 377 aa16.84■□□□□ 0.29
PGAP3-202ENST00000309862 PSMC6P62333 389 aa16.84■□□□□ 0.29
PGAP3-202ENST00000309862 ZNF211Q13398 564 aaPredicted RBP16.84■□□□□ 0.29
PGAP3-202ENST00000309862 ARSHQ5FYA8 562 aa16.84■□□□□ 0.29
PGAP3-202ENST00000309862 GKAP1Q5VSY0 366 aaPredicted RBP16.84■□□□□ 0.29
PGAP3-202ENST00000309862 GLG1Q92896 1179 aa16.84■□□□□ 0.29
PGAP3-202ENST00000309862 TPX2Q9ULW0 747 aaKnown RBP16.84■□□□□ 0.29
PGAP3-202ENST00000309862 COL22A1Q8NFW1 1626 aaPredicted RBP16.84■□□□□ 0.29
PGAP3-202ENST00000309862 CTNND1O60716 968 aaKnown RBP16.84■□□□□ 0.29
PGAP3-202ENST00000309862 H2AFZP0C0S5 128 aa16.84■□□□□ 0.29
PGAP3-202ENST00000309862 PABPC4Q13310 644 aaKnown RBP eCLIP16.84■□□□□ 0.29
PGAP3-202ENST00000309862 CCDC88AQ3V6T2 1871 aa16.84■□□□□ 0.29
PGAP3-202ENST00000309862 ARHGAP27Q6ZUM4 889 aa16.84■□□□□ 0.29
PGAP3-202ENST00000309862 PAXIP1Q6ZW49 1069 aaPredicted RBP16.84■□□□□ 0.29
PGAP3-202ENST00000309862 H2AFVQ71UI9 128 aa16.84■□□□□ 0.29
PGAP3-202ENST00000309862 N4BP2L2Q92802 583 aaPredicted RBP16.84■□□□□ 0.29
PGAP3-202ENST00000309862 SELENOSQ9BQE4 189 aa16.84■□□□□ 0.29
PGAP3-202ENST00000309862 SLURP2P0DP57 97 aa16.83■□□□□ 0.29
PGAP3-202ENST00000309862 KIRREL3Q8IZU9 778 aa16.83■□□□□ 0.29
PGAP3-202ENST00000309862 TATDN2Q93075 761 aa16.83■□□□□ 0.29
PGAP3-202ENST00000309862 HVCN1Q96D96 273 aa16.83■□□□□ 0.29
PGAP3-202ENST00000309862 PSMD1Q99460 953 aa16.83■□□□□ 0.29
PGAP3-202ENST00000309862 ODF2LQ9ULJ1 636 aa16.83■□□□□ 0.29
PGAP3-202ENST00000309862 UTP11Q9Y3A2 253 aaKnown RBP16.83■□□□□ 0.29
PGAP3-202ENST00000309862 DDX3XO00571 662 aaKnown RBP eCLIP16.83■□□□□ 0.282e-7■■■□□ 16
PGAP3-202ENST00000309862 MED24O75448 989 aa16.83■□□□□ 0.28
PGAP3-202ENST00000309862 FLOT1O75955 427 aa16.83■□□□□ 0.28
PGAP3-202ENST00000309862 AKAP3O75969 853 aa16.83■□□□□ 0.28
PGAP3-202ENST00000309862 CLSTN1O94985 981 aa16.83■□□□□ 0.28
PGAP3-202ENST00000309862 AFPP02771 609 aaKnown RBP16.83■□□□□ 0.28
PGAP3-202ENST00000309862 ZBTB48P10074 688 aaPredicted RBP16.83■□□□□ 0.28
PGAP3-202ENST00000309862 RFC4P35249 363 aa16.83■□□□□ 0.28
PGAP3-202ENST00000309862 GSTO1P78417 241 aa16.83■□□□□ 0.28
PGAP3-202ENST00000309862 IFI16Q16666 785 aaKnown RBP16.83■□□□□ 0.28
PGAP3-202ENST00000309862 DPY19L2P1Q6NXN4 242 aa16.83■□□□□ 0.28
PGAP3-202ENST00000309862 ADGRF4Q8IZF3 695 aa16.83■□□□□ 0.28
PGAP3-202ENST00000309862 CCDC26Q8TAB7 109 aa16.83■□□□□ 0.28
PGAP3-202ENST00000309862 JMJD4Q9H9V9 463 aa16.83■□□□□ 0.28
PGAP3-202ENST00000309862 GGA2Q9UJY4 613 aa16.83■□□□□ 0.28
PGAP3-202ENST00000309862 PCDHB13Q9Y5F0 798 aa16.83■□□□□ 0.28
PGAP3-202ENST00000309862 FRMD3A2A2Y4 597 aa16.83■□□□□ 0.28
PGAP3-202ENST00000309862 F8W031 263 aaPredicted RBP16.83■□□□□ 0.28
PGAP3-202ENST00000309862 XRCC5P13010 732 aaKnown RBP16.83■□□□□ 0.28
PGAP3-202ENST00000309862 PPP4CP60510 307 aa16.83■□□□□ 0.28
PGAP3-202ENST00000309862 KCNA1Q09470 495 aa16.83■□□□□ 0.28
PGAP3-202ENST00000309862 ORC2Q13416 577 aaPredicted RBP16.83■□□□□ 0.28
PGAP3-202ENST00000309862 PLCB4Q15147 1175 aa16.83■□□□□ 0.28
PGAP3-202ENST00000309862 SLC10A5Q5PT55 438 aa16.83■□□□□ 0.28
PGAP3-202ENST00000309862 UBAP2Q5T6F2 1119 aaKnown RBP16.83■□□□□ 0.28
PGAP3-202ENST00000309862 KCTD1Q719H9 257 aa16.83■□□□□ 0.28
PGAP3-202ENST00000309862 NT5DC3Q86UY8 548 aa16.83■□□□□ 0.28
PGAP3-202ENST00000309862 TBC1D31Q96DN5 1066 aa16.83■□□□□ 0.28
PGAP3-202ENST00000309862 ACTR5Q9H9F9 607 aaPredicted RBP16.83■□□□□ 0.28
PGAP3-202ENST00000309862 RTCBQ9Y3I0 505 aaKnown RBP16.83■□□□□ 0.28
PGAP3-202ENST00000309862 MYH7BA7E2Y1 1941 aa16.83■□□□□ 0.28
PGAP3-202ENST00000309862 SPDYE3A6NKU9 549 aa16.82■□□□□ 0.28
PGAP3-202ENST00000309862 DRD4P21917 467 aa16.82■□□□□ 0.28
PGAP3-202ENST00000309862 NF2P35240 595 aa16.82■□□□□ 0.28
PGAP3-202ENST00000309862 GALCP54803 685 aa16.82■□□□□ 0.28
PGAP3-202ENST00000309862 MARSP56192 900 aaKnown RBP16.82■□□□□ 0.28
PGAP3-202ENST00000309862 MTMR3Q13615 1198 aa16.82■□□□□ 0.28
PGAP3-202ENST00000309862 NEDD9Q14511 834 aa16.82■□□□□ 0.28
PGAP3-202ENST00000309862 PREPLQ4J6C6 727 aaPredicted RBP16.82■□□□□ 0.28
PGAP3-202ENST00000309862 GLYCTKQ8IVS8 523 aa16.82■□□□□ 0.28
PGAP3-202ENST00000309862 SGSM3Q96HU1 749 aa16.82■□□□□ 0.28
PGAP3-202ENST00000309862 CALR3Q96L12 384 aaKnown RBP16.82■□□□□ 0.28
PGAP3-202ENST00000309862 FMO2Q99518 471 aa16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms