RNA–Protein interactions for RNA: ENST00000309263.7

SCUBE2-201, Transcript of signal peptide, CUB domain and EGF like domain containing 2, humanhuman

TSL 5 BASIC

Gene SCUBE2, Length 3,727 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE2-201ENST00000309263 SCTRP47872 440 aa15.69■□□□□ 0.1
SCUBE2-201ENST00000309263 PABPC4Q13310 644 aaKnown RBP eCLIP15.69■□□□□ 0.1
SCUBE2-201ENST00000309263 OTUD6AQ7L8S5 288 aa15.69■□□□□ 0.1
SCUBE2-201ENST00000309263 VPS36Q86VN1 386 aa15.69■□□□□ 0.1
SCUBE2-201ENST00000309263 NBPF5PQ86XG9 351 aaPredicted RBP15.69■□□□□ 0.1
SCUBE2-201ENST00000309263 CCDC65Q8IXS2 484 aa15.69■□□□□ 0.1
SCUBE2-201ENST00000309263 NLRP3Q96P20 1036 aa15.69■□□□□ 0.1
SCUBE2-201ENST00000309263 HDAC9Q9UKV0 1011 aa15.69■□□□□ 0.1
SCUBE2-201ENST00000309263 HSPA9P38646 679 aaKnown RBP15.68■□□□□ 0.1
SCUBE2-201ENST00000309263 CYP4A11Q02928 519 aa15.68■□□□□ 0.1
SCUBE2-201ENST00000309263 EXOC3L4Q17RC7 722 aa15.68■□□□□ 0.1
SCUBE2-201ENST00000309263 RIC8AQ9NPQ8 531 aa15.68■□□□□ 0.1
SCUBE2-201ENST00000309263 STK17AQ9UEE5 414 aa15.68■□□□□ 0.1
SCUBE2-201ENST00000309263 ARMCX3Q9UH62 379 aaPredicted RBP15.68■□□□□ 0.1
SCUBE2-201ENST00000309263 STK38LQ9Y2H1 464 aa15.68■□□□□ 0.1
SCUBE2-201ENST00000309263 CAND2O75155 1236 aa15.68■□□□□ 0.1
SCUBE2-201ENST00000309263 FGRP09769 529 aa15.68■□□□□ 0.1
SCUBE2-201ENST00000309263 ITPK1Q13572 414 aa15.68■□□□□ 0.1
SCUBE2-201ENST00000309263 LRRC14Q15048 493 aa15.68■□□□□ 0.1
SCUBE2-201ENST00000309263 TEX11Q8IYF3 940 aa15.68■□□□□ 0.1
SCUBE2-201ENST00000309263 OSGEPQ9NPF4 335 aa15.68■□□□□ 0.1
SCUBE2-201ENST00000309263 CEP83Q9Y592 693 aa15.68■□□□□ 0.1
SCUBE2-201ENST00000309263 LCA5LO95447 670 aa15.68■□□□□ 0.1
SCUBE2-201ENST00000309263 MMEP08473 750 aa15.68■□□□□ 0.1
SCUBE2-201ENST00000309263 H2AFZP0C0S5 128 aa15.68■□□□□ 0.1
SCUBE2-201ENST00000309263 ANKRD20A8PQ5CZ79 823 aa15.68■□□□□ 0.1
SCUBE2-201ENST00000309263 PPP4R3AQ6IN85 833 aa15.68■□□□□ 0.1
SCUBE2-201ENST00000309263 H2AFVQ71UI9 128 aa15.68■□□□□ 0.1
SCUBE2-201ENST00000309263 ZNF572Q7Z3I7 529 aaPredicted RBP15.68■□□□□ 0.1
SCUBE2-201ENST00000309263 RDH13Q8NBN7 331 aa15.68■□□□□ 0.1
SCUBE2-201ENST00000309263 RUBCNQ92622 972 aa15.68■□□□□ 0.1
SCUBE2-201ENST00000309263 PSMD1Q99460 953 aa15.68■□□□□ 0.1
SCUBE2-201ENST00000309263 FMO2Q99518 471 aa15.68■□□□□ 0.1
SCUBE2-201ENST00000309263 NUCKS1Q9H1E3 243 aaKnown RBP15.68■□□□□ 0.1
SCUBE2-201ENST00000309263 PLCB1Q9NQ66 1216 aa15.68■□□□□ 0.1
SCUBE2-201ENST00000309263 PALM3A6NDB9 673 aaPredicted RBP15.67■□□□□ 0.1
SCUBE2-201ENST00000309263 FLOT1O75955 427 aa15.67■□□□□ 0.1
SCUBE2-201ENST00000309263 PPP2R5AQ15172 486 aa15.67■□□□□ 0.1
SCUBE2-201ENST00000309263 IFI16Q16666 785 aaKnown RBP15.67■□□□□ 0.1
SCUBE2-201ENST00000309263 ANKS4BQ8N8V4 417 aa15.67■□□□□ 0.1
SCUBE2-201ENST00000309263 PTPN22Q9Y2R2 807 aa15.67■□□□□ 0.1
SCUBE2-201ENST00000309263 NR2E1Q9Y466 385 aa15.67■□□□□ 0.1
SCUBE2-201ENST00000309263 TRAPPC3O43617 180 aa15.67■□□□□ 0.1
SCUBE2-201ENST00000309263 RASA1P20936 1047 aa15.67■□□□□ 0.1
SCUBE2-201ENST00000309263 CDK8P49336 464 aa15.67■□□□□ 0.1
SCUBE2-201ENST00000309263 GSCP56915 257 aaPredicted RBP15.67■□□□□ 0.1
SCUBE2-201ENST00000309263 MYO1EQ12965 1108 aa15.67■□□□□ 0.1
SCUBE2-201ENST00000309263 CUL1Q13616 776 aa15.67■□□□□ 0.1
SCUBE2-201ENST00000309263 ARHGAP44Q17R89 818 aa15.67■□□□□ 0.1
SCUBE2-201ENST00000309263 PTF1AQ7RTS3 328 aa15.67■□□□□ 0.1
SCUBE2-201ENST00000309263 BUD13Q9BRD0 619 aaKnown RBP eCLIP15.67■□□□□ 0.1
SCUBE2-201ENST00000309263 L3MBTL1Q9Y468 752 aa15.67■□□□□ 0.1
SCUBE2-201ENST00000309263 POTEFA5A3E0 1075 aa15.67■□□□□ 0.1
SCUBE2-201ENST00000309263 POTEIP0CG38 1075 aa15.67■□□□□ 0.1
SCUBE2-201ENST00000309263 XRCC5P13010 732 aaKnown RBP15.67■□□□□ 0.1
SCUBE2-201ENST00000309263 POTEGQ6S5H5 508 aa15.67■□□□□ 0.1
SCUBE2-201ENST00000309263 POTEEQ6S8J3 1075 aa15.67■□□□□ 0.1
SCUBE2-201ENST00000309263 SGSM3Q96HU1 749 aa15.67■□□□□ 0.1
SCUBE2-201ENST00000309263 TMOD4Q9NZQ9 345 aa15.67■□□□□ 0.1
SCUBE2-201ENST00000309263 PCDHGC5Q9Y5F6 944 aa15.67■□□□□ 0.1
SCUBE2-201ENST00000309263 TOGARAM1Q9Y4F4 1720 aa15.67■□□□□ 0.1
SCUBE2-201ENST00000309263 MYCNP04198 464 aaPredicted RBP15.66■□□□□ 0.1
SCUBE2-201ENST00000309263 SHBGP04278 402 aa15.66■□□□□ 0.1
SCUBE2-201ENST00000309263 UCHL3P15374 230 aa15.66■□□□□ 0.1
SCUBE2-201ENST00000309263 CHN1P15882 459 aa15.66■□□□□ 0.1
SCUBE2-201ENST00000309263 USP11P51784 963 aa15.66■□□□□ 0.1
SCUBE2-201ENST00000309263 IKQ13123 557 aaPredicted RBP15.66■□□□□ 0.1
SCUBE2-201ENST00000309263 PLS1Q14651 629 aa15.66■□□□□ 0.1
SCUBE2-201ENST00000309263 DNAJC17Q9NVM6 304 aaKnown RBP15.66■□□□□ 0.1
SCUBE2-201ENST00000309263 SAMD15Q9P1V8 674 aa15.66■□□□□ 0.1
SCUBE2-201ENST00000309263 NAGPAQ9UK23 515 aa15.66■□□□□ 0.1
SCUBE2-201ENST00000309263 DUOX1Q9NRD9 1551 aa15.66■□□□□ 0.1
SCUBE2-201ENST00000309263 USP17L15C9J2P7 530 aa15.66■□□□□ 0.1
SCUBE2-201ENST00000309263 USP17L13C9JLJ4 530 aa15.66■□□□□ 0.1
SCUBE2-201ENST00000309263 USP17L11C9JVI0 530 aa15.66■□□□□ 0.1
SCUBE2-201ENST00000309263 USP17L18D6R9N7 530 aa15.66■□□□□ 0.1
SCUBE2-201ENST00000309263 USP17L22D6RA61 530 aa15.66■□□□□ 0.1
SCUBE2-201ENST00000309263 USP17L17D6RBQ6 530 aa15.66■□□□□ 0.1
SCUBE2-201ENST00000309263 USP17L19D6RCP7 530 aa15.66■□□□□ 0.1
SCUBE2-201ENST00000309263 USP17L20D6RJB6 530 aa15.66■□□□□ 0.1
SCUBE2-201ENST00000309263 PLA2G4BP0C869 781 aa15.66■□□□□ 0.1
SCUBE2-201ENST00000309263 TNFRSF8P28908 595 aa15.66■□□□□ 0.1
SCUBE2-201ENST00000309263 USP17L24Q0WX57 530 aa15.66■□□□□ 0.1
SCUBE2-201ENST00000309263 USP17L6PQ6QN14 398 aa15.66■□□□□ 0.1
SCUBE2-201ENST00000309263 RPAINQ86UA6 219 aa15.66■□□□□ 0.1
SCUBE2-201ENST00000309263 GLYCTKQ8IVS8 523 aa15.66■□□□□ 0.1
SCUBE2-201ENST00000309263 CCDC197Q8NCU1 140 aa15.66■□□□□ 0.1
SCUBE2-201ENST00000309263 SRP68Q9UHB9 627 aaKnown RBP15.66■□□□□ 0.1
SCUBE2-201ENST00000309263 DDX60Q8IY21 1712 aaKnown RBP15.66■□□□□ 0.1
SCUBE2-201ENST00000309263 RGS16O15492 202 aaPredicted RBP15.66■□□□□ 0.1
SCUBE2-201ENST00000309263 PEX19P40855 299 aa15.66■□□□□ 0.1
SCUBE2-201ENST00000309263 FAM196AQ6ZSG2 479 aa15.66■□□□□ 0.1
SCUBE2-201ENST00000309263 IKZF4Q9H2S9 585 aa15.66■□□□□ 0.1
SCUBE2-201ENST00000309263 LRRN2O75325 713 aa15.65■□□□□ 0.1
SCUBE2-201ENST00000309263 PAX7P23759 505 aa15.65■□□□□ 0.1
SCUBE2-201ENST00000309263 MAP2K1Q02750 393 aaPredicted RBP15.65■□□□□ 0.1
SCUBE2-201ENST00000309263 ZKSCAN8Q15776 578 aaPredicted RBP15.65■□□□□ 0.1
SCUBE2-201ENST00000309263 AADACL2Q6P093 401 aa15.65■□□□□ 0.1
SCUBE2-201ENST00000309263 KCTD1Q719H9 257 aa15.65■□□□□ 0.1
SCUBE2-201ENST00000309263 FBXO33Q7Z6M2 555 aa15.65■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms