RNA–Protein interactions for RNA: ENST00000309041.11

CEP290-201, Transcript of centrosomal protein 290, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene CEP290, Length 7,616 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEP290-201ENST00000309041 GPSM2P81274 684 aa1.43□□□□□ -2.18
CEP290-201ENST00000309041 ALDH6A1Q02252 535 aaKnown RBP1.43□□□□□ -2.18
CEP290-201ENST00000309041 ZBTB16Q05516 673 aa1.43□□□□□ -2.18
CEP290-201ENST00000309041 HIST3H2AQ7L7L0 130 aa1.43□□□□□ -2.18
CEP290-201ENST00000309041 TPRX1Q8N7U7 411 aa1.43□□□□□ -2.18
CEP290-201ENST00000309041 SPATA5Q8NB90 893 aa1.43□□□□□ -2.18
CEP290-201ENST00000309041 SH3TC2Q8TF17 1288 aa1.43□□□□□ -2.18
CEP290-201ENST00000309041 TEKT4Q8WW24 435 aa1.43□□□□□ -2.18
CEP290-201ENST00000309041 OVCA2Q8WZ82 227 aa1.43□□□□□ -2.18
CEP290-201ENST00000309041 PGAM5Q96HS1 289 aa1.43□□□□□ -2.18
CEP290-201ENST00000309041 SLC30A2Q9BRI3 323 aa1.43□□□□□ -2.18
CEP290-201ENST00000309041 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP1.43□□□□□ -2.18
CEP290-201ENST00000309041 OSBPL5Q9H0X9 879 aaPredicted RBP1.43□□□□□ -2.18
CEP290-201ENST00000309041 SRP68Q9UHB9 627 aaKnown RBP1.43□□□□□ -2.18
CEP290-201ENST00000309041 CTNNA3Q9UI47 895 aa1.43□□□□□ -2.18
CEP290-201ENST00000309041 KCPQ6ZWJ8 1503 aa1.43□□□□□ -2.18
CEP290-201ENST00000309041 NEMP2A6NFY4 417 aa1.43□□□□□ -2.18
CEP290-201ENST00000309041 TRIM38O00635 465 aa1.43□□□□□ -2.18
CEP290-201ENST00000309041 TCERG1O14776 1098 aaKnown RBP1.43□□□□□ -2.18
CEP290-201ENST00000309041 ATE1O95260 518 aa1.43□□□□□ -2.18
CEP290-201ENST00000309041 TSPY4P0CV99 314 aa1.43□□□□□ -2.18
CEP290-201ENST00000309041 TSPY10P0CW01 314 aa1.43□□□□□ -2.18
CEP290-201ENST00000309041 KRT13P13646 458 aa1.43□□□□□ -2.18
CEP290-201ENST00000309041 BRD2P25440 801 aaKnown RBP1.43□□□□□ -2.18
CEP290-201ENST00000309041 SUCLG1P53597 346 aaKnown RBP1.43□□□□□ -2.18
CEP290-201ENST00000309041 POU3F1Q03052 451 aaPredicted RBP1.43□□□□□ -2.18
CEP290-201ENST00000309041 UBAP2LQ14157 1087 aaKnown RBP1.43□□□□□ -2.18
CEP290-201ENST00000309041 DGKKQ5KSL6 1271 aa1.43□□□□□ -2.18
CEP290-201ENST00000309041 NXNQ6DKJ4 435 aa1.43□□□□□ -2.18
CEP290-201ENST00000309041 MFSD6Q6ZSS7 791 aa1.43□□□□□ -2.18
CEP290-201ENST00000309041 ANKRD23Q86SG2 305 aa1.43□□□□□ -2.18
CEP290-201ENST00000309041 REXO1L1PQ8IX06 675 aa1.43□□□□□ -2.18
CEP290-201ENST00000309041 KIAA2013Q8IYS2 634 aa1.43□□□□□ -2.18
CEP290-201ENST00000309041 SYAP1Q96A49 352 aaPredicted RBP1.43□□□□□ -2.18
CEP290-201ENST00000309041 SAAL1Q96ER3 474 aa1.43□□□□□ -2.18
CEP290-201ENST00000309041 GPATCH3Q96I76 525 aa1.43□□□□□ -2.18
CEP290-201ENST00000309041 ITPAQ9BY32 194 aa1.43□□□□□ -2.18
CEP290-201ENST00000309041 POLR1EQ9GZS1 481 aaKnown RBP1.43□□□□□ -2.18
CEP290-201ENST00000309041 ZNF408Q9H9D4 720 aa1.43□□□□□ -2.18
CEP290-201ENST00000309041 BEX1Q9HBH7 125 aa1.43□□□□□ -2.18
CEP290-201ENST00000309041 ABCB8Q9NUT2 735 aa1.43□□□□□ -2.18
CEP290-201ENST00000309041 NAGPAQ9UK23 515 aa1.43□□□□□ -2.18
CEP290-201ENST00000309041 ANGPTL2Q9UKU9 493 aa1.43□□□□□ -2.18
CEP290-201ENST00000309041 SOX13Q9UN79 622 aa1.43□□□□□ -2.18
CEP290-201ENST00000309041 NOC2LQ9Y3T9 749 aaKnown RBP1.43□□□□□ -2.18
CEP290-201ENST00000309041 USP31Q70CQ4 1352 aa1.43□□□□□ -2.18
CEP290-201ENST00000309041 ATP10BO94823 1461 aa1.43□□□□□ -2.18
CEP290-201ENST00000309041 ERCC6L2Q5T890 1561 aa1.43□□□□□ -2.18
CEP290-201ENST00000309041 DNAH3Q8TD57 4116 aa1.43□□□□□ -2.18
CEP290-201ENST00000309041 PTPRKQ15262 1439 aa1.43□□□□□ -2.18
CEP290-201ENST00000309041 TSPAN11A1L157 253 aa1.43□□□□□ -2.18
CEP290-201ENST00000309041 EIF3CLB5ME19 914 aaKnown RBP1.43□□□□□ -2.18
CEP290-201ENST00000309041 CHEK2O96017 543 aa1.43□□□□□ -2.18
CEP290-201ENST00000309041 ATP6V1B1P15313 513 aa1.43□□□□□ -2.18
CEP290-201ENST00000309041 BDNFP23560 247 aa1.43□□□□□ -2.18
CEP290-201ENST00000309041 TYK2P29597 1187 aa1.43□□□□□ -2.18
CEP290-201ENST00000309041 SLC5A2P31639 672 aa1.43□□□□□ -2.18
CEP290-201ENST00000309041 CHRNA3P32297 505 aa1.43□□□□□ -2.18
CEP290-201ENST00000309041 MLLT3P42568 568 aaPredicted RBP1.43□□□□□ -2.18
CEP290-201ENST00000309041 PTPN5P54829 565 aa1.43□□□□□ -2.18
CEP290-201ENST00000309041 CASP7P55210 303 aa1.43□□□□□ -2.18
CEP290-201ENST00000309041 APBA1Q02410 837 aa1.43□□□□□ -2.18
CEP290-201ENST00000309041 ASPHQ12797 758 aa1.43□□□□□ -2.18
CEP290-201ENST00000309041 LAPTM5Q13571 262 aa1.43□□□□□ -2.18
CEP290-201ENST00000309041 SMAD2Q15796 467 aaKnown RBP1.43□□□□□ -2.18
CEP290-201ENST00000309041 AASDHQ4L235 1098 aaPredicted RBP1.43□□□□□ -2.18
CEP290-201ENST00000309041 KIAA0319Q5VV43 1072 aa1.43□□□□□ -2.18
CEP290-201ENST00000309041 ZYG11AQ6WRX3 759 aa1.43□□□□□ -2.18
CEP290-201ENST00000309041 C9orf43Q8TAL5 461 aaPredicted RBP1.43□□□□□ -2.18
CEP290-201ENST00000309041 PPP4R1Q8TF05 950 aa1.43□□□□□ -2.18
CEP290-201ENST00000309041 PPWD1Q96BP3 646 aaKnown RBP1.43□□□□□ -2.18
CEP290-201ENST00000309041 PRR11Q96HE9 360 aaPredicted RBP1.43□□□□□ -2.18
CEP290-201ENST00000309041 GPR101Q96P66 508 aaPredicted RBP1.43□□□□□ -2.18
CEP290-201ENST00000309041 PHF12Q96QT6 1004 aa1.43□□□□□ -2.18
CEP290-201ENST00000309041 SH3GL2Q99962 352 aa1.43□□□□□ -2.18
CEP290-201ENST00000309041 PDCD2LQ9BRP1 358 aa1.43□□□□□ -2.18
CEP290-201ENST00000309041 LRRCC1Q9C099 1032 aa1.43□□□□□ -2.18
CEP290-201ENST00000309041 MAF1Q9H063 256 aa1.43□□□□□ -2.18
CEP290-201ENST00000309041 ILKAPQ9H0C8 392 aaPredicted RBP1.43□□□□□ -2.18
CEP290-201ENST00000309041 ESF1Q9H501 851 aaKnown RBP1.43□□□□□ -2.18
CEP290-201ENST00000309041 PSD3Q9NYI0 1048 aa1.43□□□□□ -2.18
CEP290-201ENST00000309041 FRMPD4Q14CM0 1322 aa1.43□□□□□ -2.18
CEP290-201ENST00000309041 SPATA31A1Q5TZJ5 1347 aa1.43□□□□□ -2.18
CEP290-201ENST00000309041 SYCP2Q9BX26 1530 aa1.43□□□□□ -2.18
CEP290-201ENST00000309041 EFCAB8A8MWE9 144 aa1.43□□□□□ -2.18
CEP290-201ENST00000309041 DNALI1O14645 258 aaPredicted RBP1.43□□□□□ -2.18
CEP290-201ENST00000309041 SCAMP2O15127 329 aaKnown RBP1.43□□□□□ -2.18
CEP290-201ENST00000309041 NOL4O94818 638 aa1.43□□□□□ -2.18
CEP290-201ENST00000309041 ZBTB7AO95365 584 aa1.43□□□□□ -2.18
CEP290-201ENST00000309041 SNRPCP09234 159 aaKnown RBP1.43□□□□□ -2.18
CEP290-201ENST00000309041 SPAM1P38567 509 aa1.43□□□□□ -2.18
CEP290-201ENST00000309041 MAP2K3P46734 347 aa1.43□□□□□ -2.18
CEP290-201ENST00000309041 VEGFBP49765 207 aa1.43□□□□□ -2.18
CEP290-201ENST00000309041 LIMK1P53667 647 aa1.43□□□□□ -2.18
CEP290-201ENST00000309041 NR1D2Q14995 579 aa1.43□□□□□ -2.18
CEP290-201ENST00000309041 ZYXQ15942 572 aaKnown RBP1.43□□□□□ -2.18
CEP290-201ENST00000309041 EFHC2Q5JST6 749 aa1.43□□□□□ -2.18
CEP290-201ENST00000309041 TTC19Q6DKK2 380 aaPredicted RBP1.43□□□□□ -2.18
CEP290-201ENST00000309041 ZSCAN30Q86W11 494 aa1.43□□□□□ -2.18
CEP290-201ENST00000309041 DNAJC10Q8IXB1 793 aa1.43□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms