RNA–Protein interactions for RNA: ENST00000306177.9

USP42-201, Transcript of ubiquitin specific peptidase 42, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP42, Length 5,155 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-201ENST00000306177 LRRIQ1Q96JM4 1722 aa17.21■□□□□ 0.35
USP42-201ENST00000306177 JCADQ9P266 1359 aa17.21■□□□□ 0.35
USP42-201ENST00000306177 USP17L15C9J2P7 530 aa17.21■□□□□ 0.35
USP42-201ENST00000306177 USP17L10C9JJH3 530 aa17.21■□□□□ 0.35
USP42-201ENST00000306177 USP17L13C9JLJ4 530 aa17.21■□□□□ 0.35
USP42-201ENST00000306177 USP17L11C9JVI0 530 aa17.21■□□□□ 0.35
USP42-201ENST00000306177 USP17L18D6R9N7 530 aa17.21■□□□□ 0.35
USP42-201ENST00000306177 USP17L22D6RA61 530 aa17.21■□□□□ 0.35
USP42-201ENST00000306177 USP17L17D6RBQ6 530 aa17.21■□□□□ 0.35
USP42-201ENST00000306177 USP17L19D6RCP7 530 aa17.21■□□□□ 0.35
USP42-201ENST00000306177 USP17L20D6RJB6 530 aa17.21■□□□□ 0.35
USP42-201ENST00000306177 USP17L24Q0WX57 530 aa17.21■□□□□ 0.35
USP42-201ENST00000306177 USP17L6PQ6QN14 398 aa17.21■□□□□ 0.35
USP42-201ENST00000306177 RHOT2Q8IXI1 618 aa17.21■□□□□ 0.35
USP42-201ENST00000306177 C7orf31Q8N865 590 aa17.21■□□□□ 0.35
USP42-201ENST00000306177 EFCC1Q9HA90 598 aa17.21■□□□□ 0.35
USP42-201ENST00000306177 GSTA1P08263 222 aa17.21■□□□□ 0.35
USP42-201ENST00000306177 GSTA2P09210 222 aa17.21■□□□□ 0.35
USP42-201ENST00000306177 SRGAP2CP0DJJ0 459 aa17.21■□□□□ 0.35
USP42-201ENST00000306177 MUM1L1Q5H9M0 696 aa17.21■□□□□ 0.35
USP42-201ENST00000306177 TCP11Q8WWU5 503 aa17.21■□□□□ 0.35
USP42-201ENST00000306177 PNMA3Q9UL41 463 aa17.21■□□□□ 0.35
USP42-201ENST00000306177 GOLGA8CPA6NN73 597 aa17.2■□□□□ 0.34
USP42-201ENST00000306177 ORC4O43929 436 aa17.2■□□□□ 0.34
USP42-201ENST00000306177 RMDN3Q96TC7 470 aa17.2■□□□□ 0.34
USP42-201ENST00000306177 TBC1D22BQ9NU19 505 aa17.2■□□□□ 0.34
USP42-201ENST00000306177 DIP2AQ14689 1571 aa17.2■□□□□ 0.34
USP42-201ENST00000306177 ARHGEF37A1IGU5 675 aa17.2■□□□□ 0.34
USP42-201ENST00000306177 TXNDC9O14530 226 aa17.2■□□□□ 0.34
USP42-201ENST00000306177 ECE1P42892 770 aa17.2■□□□□ 0.34
USP42-201ENST00000306177 DHX9Q08211 1270 aaKnown RBP17.2■□□□□ 0.34
USP42-201ENST00000306177 PLCB4Q15147 1175 aa17.2■□□□□ 0.34
USP42-201ENST00000306177 OR6B2Q6IFH4 312 aa17.2■□□□□ 0.34
USP42-201ENST00000306177 MCPH1Q8NEM0 835 aa17.2■□□□□ 0.34
USP42-201ENST00000306177 CEP72Q9P209 647 aa17.2■□□□□ 0.34
USP42-201ENST00000306177 FBXO40Q9UH90 709 aa17.2■□□□□ 0.34
USP42-201ENST00000306177 IRX4P78413 519 aa17.2■□□□□ 0.34
USP42-201ENST00000306177 SLMAPQ14BN4 828 aa17.2■□□□□ 0.34
USP42-201ENST00000306177 SFR1Q86XK3 245 aa17.2■□□□□ 0.34
USP42-201ENST00000306177 SP8Q8IXZ3 490 aa17.2■□□□□ 0.34
USP42-201ENST00000306177 ZNF34Q8IZ26 560 aa17.2■□□□□ 0.34
USP42-201ENST00000306177 KCTD6Q8NC69 237 aa17.2■□□□□ 0.34
USP42-201ENST00000306177 PARD6BQ9BYG5 372 aa17.2■□□□□ 0.34
USP42-201ENST00000306177 SUN1O94901 812 aa17.2■□□□□ 0.34
USP42-201ENST00000306177 STOX1Q6ZVD7 989 aa17.2■□□□□ 0.34
USP42-201ENST00000306177 LRRC4Q9HBW1 653 aa17.2■□□□□ 0.34
USP42-201ENST00000306177 ACTN1P12814 892 aa17.19■□□□□ 0.34
USP42-201ENST00000306177 PHLDB3Q6NSJ2 640 aa17.19■□□□□ 0.34
USP42-201ENST00000306177 CCNYQ8ND76 341 aa17.19■□□□□ 0.34
USP42-201ENST00000306177 CALN1Q9BXU9 219 aa17.19■□□□□ 0.34
USP42-201ENST00000306177 ATP6V0A4Q9HBG4 840 aa17.19■□□□□ 0.34
USP42-201ENST00000306177 HOXC10Q9NYD6 342 aa17.19■□□□□ 0.34
USP42-201ENST00000306177 ABCB11O95342 1321 aa17.19■□□□□ 0.34
USP42-201ENST00000306177 WDR64B1ANS9 1081 aa17.19■□□□□ 0.34
USP42-201ENST00000306177 CPP00450 1065 aa17.19■□□□□ 0.34
USP42-201ENST00000306177 DYNLT1P63172 113 aa17.19■□□□□ 0.34
USP42-201ENST00000306177 SMIM5Q71RC9 77 aa17.19■□□□□ 0.34
USP42-201ENST00000306177 PXDNLA1KZ92 1463 aa17.19■□□□□ 0.34
USP42-201ENST00000306177 LRRD1A4D1F6 860 aa17.19■□□□□ 0.34
USP42-201ENST00000306177 TRIM49BA6NDI0 452 aa17.19■□□□□ 0.34
USP42-201ENST00000306177 PRPSAP2O60256 369 aa17.19■□□□□ 0.34
USP42-201ENST00000306177 NLRP4Q96MN2 994 aa17.19■□□□□ 0.34
USP42-201ENST00000306177 SCINQ9Y6U3 715 aa17.19■□□□□ 0.34
USP42-201ENST00000306177 STXBP2Q15833 593 aa17.19■□□□□ 0.34
USP42-201ENST00000306177 CYP4F22Q6NT55 531 aa17.19■□□□□ 0.34
USP42-201ENST00000306177 WHAMMQ8TF30 809 aa17.19■□□□□ 0.34
USP42-201ENST00000306177 FAM167AQ96KS9 214 aa17.19■□□□□ 0.34
USP42-201ENST00000306177 E9PMD0 336 aa17.18■□□□□ 0.34
USP42-201ENST00000306177 ZBTB24O43167 697 aaPredicted RBP17.18■□□□□ 0.34
USP42-201ENST00000306177 NR3C1P04150 777 aa17.18■□□□□ 0.34
USP42-201ENST00000306177 CASP1P29466 404 aa17.18■□□□□ 0.34
USP42-201ENST00000306177 IFNAR2P48551 515 aa17.18■□□□□ 0.34
USP42-201ENST00000306177 BIRC2Q13490 618 aa17.18■□□□□ 0.34
USP42-201ENST00000306177 TTC19Q6DKK2 380 aaPredicted RBP17.18■□□□□ 0.34
USP42-201ENST00000306177 DARS2Q6PI48 645 aaKnown RBP17.18■□□□□ 0.34
USP42-201ENST00000306177 GIMAP8Q8ND71 665 aaPredicted RBP17.18■□□□□ 0.34
USP42-201ENST00000306177 NEK9Q8TD19 979 aa17.18■□□□□ 0.34
USP42-201ENST00000306177 SLC10A4Q96EP9 437 aa17.18■□□□□ 0.34
USP42-201ENST00000306177 CAMTA2O94983 1202 aa17.18■□□□□ 0.34
USP42-201ENST00000306177 MARK3P27448 753 aa17.18■□□□□ 0.34
USP42-201ENST00000306177 PRCPP42785 496 aa17.18■□□□□ 0.34
USP42-201ENST00000306177 PADI6Q6TGC4 694 aa17.18■□□□□ 0.34
USP42-201ENST00000306177 HEXIM2Q96MH2 286 aaKnown RBP17.18■□□□□ 0.34
USP42-201ENST00000306177 ABHD10Q9NUJ1 306 aa17.18■□□□□ 0.34
USP42-201ENST00000306177 DNAJC12Q9UKB3 198 aa17.18■□□□□ 0.34
USP42-201ENST00000306177 HIP1RO75146 1068 aa17.18■□□□□ 0.34
USP42-201ENST00000306177 MSH2P43246 934 aa17.18■□□□□ 0.34
USP42-201ENST00000306177 KRT76Q01546 638 aa17.18■□□□□ 0.34
USP42-201ENST00000306177 DR1Q01658 176 aa17.18■□□□□ 0.34
USP42-201ENST00000306177 VPS72Q15906 364 aa17.18■□□□□ 0.34
USP42-201ENST00000306177 NSUN4Q96CB9 384 aaKnown RBP17.18■□□□□ 0.34
USP42-201ENST00000306177 TYW5A2RUC4 315 aaKnown RBP17.18■□□□□ 0.34
USP42-201ENST00000306177 RWDD2BP57060 319 aa17.18■□□□□ 0.34
USP42-201ENST00000306177 BASP1P80723 227 aaKnown RBP17.18■□□□□ 0.34
USP42-201ENST00000306177 COASYQ13057 564 aa17.18■□□□□ 0.34
USP42-201ENST00000306177 SF3B3Q15393 1217 aaKnown RBP17.18■□□□□ 0.34
USP42-201ENST00000306177 SCARA5Q6ZMJ2 495 aa17.18■□□□□ 0.34
USP42-201ENST00000306177 ARHGEF18Q6ZSZ5 1173 aa17.18■□□□□ 0.34
USP42-201ENST00000306177 SIX6OS1Q8N1H7 587 aa17.18■□□□□ 0.34
USP42-201ENST00000306177 KIAA1586Q9HCI6 787 aa17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms