RNA–Protein interactions for RNA: ENST00000304636.7

COL3A1-201, Transcript of collagen type III alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL3A1, Length 5,543 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL3A1-201ENST00000304636 ANKFY1Q9P2R3 1169 aa13.83□□□□□ -0.2
COL3A1-201ENST00000304636 FBXO2Q9UK22 296 aaPredicted RBP13.83□□□□□ -0.2
COL3A1-201ENST00000304636 USP17L8P0C7I0 530 aa13.82□□□□□ -0.2
COL3A1-201ENST00000304636 GABPAQ06546 454 aa13.82□□□□□ -0.2
COL3A1-201ENST00000304636 MYO1EQ12965 1108 aa13.82□□□□□ -0.2
COL3A1-201ENST00000304636 CCNI2Q6ZMN8 369 aaPredicted RBP13.82□□□□□ -0.2
COL3A1-201ENST00000304636 NME8Q8N427 588 aa13.82□□□□□ -0.2
COL3A1-201ENST00000304636 DDX47Q9H0S4 455 aaKnown RBP13.82□□□□□ -0.2
COL3A1-201ENST00000304636 KMT5AQ9NQR1 393 aa13.82□□□□□ -0.2
COL3A1-201ENST00000304636 ZNF277Q9NRM2 450 aaPredicted RBP13.82□□□□□ -0.2
COL3A1-201ENST00000304636 ZFP69BQ9UJL9 534 aa13.82□□□□□ -0.2
COL3A1-201ENST00000304636 INTUQ9ULD6 942 aa13.82□□□□□ -0.2
COL3A1-201ENST00000304636 HPCAL4Q9UM19 191 aa13.82□□□□□ -0.2
COL3A1-201ENST00000304636 TOM1L1O75674 476 aa13.82□□□□□ -0.2
COL3A1-201ENST00000304636 ACTN1P12814 892 aa13.82□□□□□ -0.2
COL3A1-201ENST00000304636 KCNB1Q14721 858 aa13.82□□□□□ -0.2
COL3A1-201ENST00000304636 DDX17Q92841 729 aaKnown RBP13.82□□□□□ -0.2
COL3A1-201ENST00000304636 PPWD1Q96BP3 646 aaKnown RBP13.82□□□□□ -0.2
COL3A1-201ENST00000304636 YIPF3Q9GZM5 350 aa13.82□□□□□ -0.2
COL3A1-201ENST00000304636 BRDTQ58F21 947 aaPredicted RBP13.82□□□□□ -0.2
COL3A1-201ENST00000304636 TTC25Q96NG3 672 aa13.82□□□□□ -0.2
COL3A1-201ENST00000304636 LRRC37BQ96QE4 947 aa13.82□□□□□ -0.2
COL3A1-201ENST00000304636 NCAPGQ9BPX3 1015 aa13.82□□□□□ -0.2
COL3A1-201ENST00000304636 DNAJC17Q9NVM6 304 aaKnown RBP13.82□□□□□ -0.2
COL3A1-201ENST00000304636 MGEA5O60502 916 aa13.82□□□□□ -0.2
COL3A1-201ENST00000304636 DNAJC8O75937 253 aaPredicted RBP13.82□□□□□ -0.2
COL3A1-201ENST00000304636 SAT1P21673 171 aa13.82□□□□□ -0.2
COL3A1-201ENST00000304636 GPC5P78333 572 aa13.82□□□□□ -0.2
COL3A1-201ENST00000304636 SATB1Q01826 763 aa13.82□□□□□ -0.2
COL3A1-201ENST00000304636 DEUP1Q05D60 604 aa13.82□□□□□ -0.2
COL3A1-201ENST00000304636 KCNH2Q12809 1159 aa13.82□□□□□ -0.2
COL3A1-201ENST00000304636 DARS2Q6PI48 645 aaKnown RBP13.82□□□□□ -0.2
COL3A1-201ENST00000304636 TC2NQ8N9U0 490 aa13.82□□□□□ -0.2
COL3A1-201ENST00000304636 ZNF473Q8WTR7 871 aaKnown RBP13.82□□□□□ -0.2
COL3A1-201ENST00000304636 ATP6V0A1Q93050 837 aa13.82□□□□□ -0.2
COL3A1-201ENST00000304636 SLC24A3Q9HC58 644 aa13.82□□□□□ -0.2
COL3A1-201ENST00000304636 FBXL5Q9UKA1 691 aa13.82□□□□□ -0.2
COL3A1-201ENST00000304636 A0A0G2JND7 137 aa13.81□□□□□ -0.2
COL3A1-201ENST00000304636 H0Y3Z8 333 aa13.81□□□□□ -0.2
COL3A1-201ENST00000304636 CHGBP05060 677 aa13.81□□□□□ -0.2
COL3A1-201ENST00000304636 STX1BP61266 288 aa13.81□□□□□ -0.2
COL3A1-201ENST00000304636 ATP2C1P98194 919 aaPredicted RBP13.81□□□□□ -0.2
COL3A1-201ENST00000304636 BBS9Q3SYG4 887 aa13.81□□□□□ -0.2
COL3A1-201ENST00000304636 LRIG3Q6UXM1 1119 aa13.81□□□□□ -0.2
COL3A1-201ENST00000304636 FAM47EQ6ZV65 393 aa13.81□□□□□ -0.2
COL3A1-201ENST00000304636 GRAMD1AQ96CP6 724 aa13.81□□□□□ -0.2
COL3A1-201ENST00000304636 SAYSD1Q9NPB0 183 aa13.81□□□□□ -0.2
COL3A1-201ENST00000304636 ASAP1Q9ULH1 1129 aa13.81□□□□□ -0.2
COL3A1-201ENST00000304636 ZBTB1Q9Y2K1 713 aa13.81□□□□□ -0.2
COL3A1-201ENST00000304636 SCINQ9Y6U3 715 aa13.81□□□□□ -0.2
COL3A1-201ENST00000304636 CAPN9O14815 690 aa13.81□□□□□ -0.2
COL3A1-201ENST00000304636 SLC16A2P36021 539 aa13.81□□□□□ -0.2
COL3A1-201ENST00000304636 MKRN3Q13064 507 aaKnown RBP13.81□□□□□ -0.2
COL3A1-201ENST00000304636 DYNC1I2Q13409 638 aaKnown RBP13.81□□□□□ -0.2
COL3A1-201ENST00000304636 UBE2SQ16763 222 aa13.81□□□□□ -0.2
COL3A1-201ENST00000304636 STOX1Q6ZVD7 989 aa13.81□□□□□ -0.2
COL3A1-201ENST00000304636 GUF1Q8N442 669 aaKnown RBP13.81□□□□□ -0.2
COL3A1-201ENST00000304636 DYNLL2Q96FJ2 89 aa13.81□□□□□ -0.2
COL3A1-201ENST00000304636 TRAIPQ9BWF2 469 aa13.81□□□□□ -0.2
COL3A1-201ENST00000304636 L2HGDHQ9H9P8 463 aa13.81□□□□□ -0.2
COL3A1-201ENST00000304636 NOC2LQ9Y3T9 749 aaKnown RBP13.81□□□□□ -0.2
COL3A1-201ENST00000304636 PALLDQ8WX93 1383 aa13.81□□□□□ -0.2
COL3A1-201ENST00000304636 USP17L3A6NCW0 530 aa13.81□□□□□ -0.2
COL3A1-201ENST00000304636 USP17L4A6NCW7 530 aa13.81□□□□□ -0.2
COL3A1-201ENST00000304636 TRPA1O75762 1119 aa13.81□□□□□ -0.2
COL3A1-201ENST00000304636 DYNLT1P63172 113 aa13.81□□□□□ -0.2
COL3A1-201ENST00000304636 USPL1Q5W0Q7 1092 aa13.81□□□□□ -0.2
COL3A1-201ENST00000304636 RAPH1Q70E73 1250 aa13.81□□□□□ -0.2
COL3A1-201ENST00000304636 USP17L1Q7RTZ2 530 aa13.81□□□□□ -0.2
COL3A1-201ENST00000304636 ABTB1Q969K4 478 aaPredicted RBP13.81□□□□□ -0.2
COL3A1-201ENST00000304636 CCPG1Q9ULG6 757 aa13.81□□□□□ -0.2
COL3A1-201ENST00000304636 TOM1O60784 492 aa13.81□□□□□ -0.2
COL3A1-201ENST00000304636 MX2P20592 715 aa13.81□□□□□ -0.2
COL3A1-201ENST00000304636 SCNN1DP51172 638 aa13.81□□□□□ -0.2
COL3A1-201ENST00000304636 MECOMQ03112 1051 aa13.81□□□□□ -0.2
COL3A1-201ENST00000304636 KRT80Q6KB66 452 aa13.81□□□□□ -0.2
COL3A1-201ENST00000304636 PDXDC1Q6P996 788 aa13.81□□□□□ -0.2
COL3A1-201ENST00000304636 CRLF3Q8IUI8 442 aa13.81□□□□□ -0.2
COL3A1-201ENST00000304636 KANSL2Q9H9L4 492 aa13.81□□□□□ -0.2
COL3A1-201ENST00000304636 NRBP2Q9NSY0 501 aa13.81□□□□□ -0.2
COL3A1-201ENST00000304636 ZBTB22O15209 634 aa13.8□□□□□ -0.2
COL3A1-201ENST00000304636 TJP3O95049 919 aa13.8□□□□□ -0.2
COL3A1-201ENST00000304636 FMR1Q06787 632 aaKnown RBP eCLIP13.8□□□□□ -0.2
COL3A1-201ENST00000304636 CAPRIN2Q6IMN6 1127 aaKnown RBP13.8□□□□□ -0.2
COL3A1-201ENST00000304636 SRRM1Q8IYB3 904 aaKnown RBP13.8□□□□□ -0.2
COL3A1-201ENST00000304636 TGS1Q96RS0 853 aaKnown RBP13.8□□□□□ -0.2
COL3A1-201ENST00000304636 CLTCL1P53675 1640 aa13.8□□□□□ -0.2
COL3A1-201ENST00000304636 H0YIN7 160 aa13.8□□□□□ -0.2
COL3A1-201ENST00000304636 TTI1O43156 1089 aa13.8□□□□□ -0.2
COL3A1-201ENST00000304636 CRKLP46109 303 aaKnown RBP13.8□□□□□ -0.2
COL3A1-201ENST00000304636 PRPSAP1Q14558 356 aa13.8□□□□□ -0.2
COL3A1-201ENST00000304636 TMED8Q6PL24 325 aaPredicted RBP13.8□□□□□ -0.2
COL3A1-201ENST00000304636 ENAHQ8N8S7 591 aaPredicted RBP13.8□□□□□ -0.2
COL3A1-201ENST00000304636 KCTD6Q8NC69 237 aa13.8□□□□□ -0.2
COL3A1-201ENST00000304636 ARMC2Q8NEN0 867 aa13.8□□□□□ -0.2
COL3A1-201ENST00000304636 ETNK1Q9HBU6 452 aa13.8□□□□□ -0.2
COL3A1-201ENST00000304636 ADD3Q9UEY8 706 aaKnown RBP13.8□□□□□ -0.2
COL3A1-201ENST00000304636 COASYQ13057 564 aa13.8□□□□□ -0.2
COL3A1-201ENST00000304636 DHX34Q14147 1143 aaKnown RBP13.8□□□□□ -0.2
COL3A1-201ENST00000304636 CCT8L2Q96SF2 557 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms