RNA–Protein interactions for RNA: ENST00000303383.7

SHCBP1-201, Transcript of SHC binding and spindle associated 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHCBP1, Length 3,461 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-201ENST00000303383 GNA14O95837 355 aa16.02■□□□□ 0.16
SHCBP1-201ENST00000303383 PSMC5P62195 406 aa16.02■□□□□ 0.16
SHCBP1-201ENST00000303383 ADAM9Q13443 819 aa16.02■□□□□ 0.16
SHCBP1-201ENST00000303383 SNAPC2Q13487 334 aa16.02■□□□□ 0.16
SHCBP1-201ENST00000303383 MAN2A1Q16706 1144 aa16.02■□□□□ 0.16
SHCBP1-201ENST00000303383 ODR4Q5SWX8 454 aa16.02■□□□□ 0.16
SHCBP1-201ENST00000303383 B3GNT9Q6UX72 402 aa16.02■□□□□ 0.16
SHCBP1-201ENST00000303383 C1orf186Q6ZWK4 172 aa16.02■□□□□ 0.16
SHCBP1-201ENST00000303383 CCDC51Q96ER9 411 aa16.02■□□□□ 0.16
SHCBP1-201ENST00000303383 WRAP73Q9P2S5 460 aaPredicted RBP16.02■□□□□ 0.16
SHCBP1-201ENST00000303383 A0A1W2PQC6 194 aa16.02■□□□□ 0.15
SHCBP1-201ENST00000303383 KNOP1Q1ED39 458 aaKnown RBP16.02■□□□□ 0.15
SHCBP1-201ENST00000303383 ILDR2Q71H61 639 aa16.02■□□□□ 0.15
SHCBP1-201ENST00000303383 DNERQ8NFT8 737 aa16.02■□□□□ 0.15
SHCBP1-201ENST00000303383 INPP4AQ96PE3 977 aaPredicted RBP16.02■□□□□ 0.15
SHCBP1-201ENST00000303383 IWS1Q96ST2 819 aa16.02■□□□□ 0.15
SHCBP1-201ENST00000303383 ODF2LQ9ULJ1 636 aa16.02■□□□□ 0.15
SHCBP1-201ENST00000303383 LUC7L2Q9Y383 392 aaKnown RBP16.02■□□□□ 0.15
SHCBP1-201ENST00000303383 PCDHA2Q9Y5H9 948 aa16.02■□□□□ 0.15
SHCBP1-201ENST00000303383 SORBS3O60504 671 aa16.02■□□□□ 0.15
SHCBP1-201ENST00000303383 DKC1O60832 514 aaKnown RBP eCLIP16.02■□□□□ 0.15
SHCBP1-201ENST00000303383 MYBP10242 640 aa16.02■□□□□ 0.15
SHCBP1-201ENST00000303383 KRT9P35527 623 aa16.02■□□□□ 0.15
SHCBP1-201ENST00000303383 SYCP1Q15431 976 aa16.02■□□□□ 0.15
SHCBP1-201ENST00000303383 CEP135Q66GS9 1140 aa16.02■□□□□ 0.15
SHCBP1-201ENST00000303383 CEP63Q96MT8 703 aa16.02■□□□□ 0.15
SHCBP1-201ENST00000303383 NAA15Q9BXJ9 866 aaKnown RBP16.02■□□□□ 0.15
SHCBP1-201ENST00000303383 SEL1LQ9UBV2 794 aa16.02■□□□□ 0.15
SHCBP1-201ENST00000303383 KCNH4Q9UQ05 1017 aa16.02■□□□□ 0.15
SHCBP1-201ENST00000303383 PCDHA10Q9Y5I2 948 aa16.02■□□□□ 0.15
SHCBP1-201ENST00000303383 USO1O60763 962 aaKnown RBP16.01■□□□□ 0.15
SHCBP1-201ENST00000303383 GYPCP04921 128 aa16.01■□□□□ 0.15
SHCBP1-201ENST00000303383 NR2F2P24468 414 aa16.01■□□□□ 0.15
SHCBP1-201ENST00000303383 RPL13P26373 211 aaKnown RBP16.01■□□□□ 0.15
SHCBP1-201ENST00000303383 YWHABP31946 246 aaKnown RBP16.01■□□□□ 0.15
SHCBP1-201ENST00000303383 CNTN2Q02246 1040 aa16.01■□□□□ 0.15
SHCBP1-201ENST00000303383 VWA3BQ502W6 1294 aa16.01■□□□□ 0.15
SHCBP1-201ENST00000303383 XKR9Q5GH70 373 aa16.01■□□□□ 0.15
SHCBP1-201ENST00000303383 ZNF746Q6NUN9 644 aaPredicted RBP16.01■□□□□ 0.15
SHCBP1-201ENST00000303383 SEPT14Q6ZU15 432 aa16.01■□□□□ 0.15
SHCBP1-201ENST00000303383 NDST4Q9H3R1 872 aa16.01■□□□□ 0.15
SHCBP1-201ENST00000303383 RLFQ13129 1914 aa16.01■□□□□ 0.15
SHCBP1-201ENST00000303383 USP27XA6NNY8 438 aa16.01■□□□□ 0.15
SHCBP1-201ENST00000303383 BACH1O14867 736 aa16.01■□□□□ 0.15
SHCBP1-201ENST00000303383 KCNJ6P48051 423 aa16.01■□□□□ 0.15
SHCBP1-201ENST00000303383 NUP58Q9BVL2 599 aa16.01■□□□□ 0.15
SHCBP1-201ENST00000303383 SLC25A27O95847 323 aa16■□□□□ 0.15
SHCBP1-201ENST00000303383 CASP5P51878 434 aa16■□□□□ 0.15
SHCBP1-201ENST00000303383 FOXR2Q6PJQ5 311 aa16■□□□□ 0.15
SHCBP1-201ENST00000303383 ZNF397Q8NF99 534 aaPredicted RBP16■□□□□ 0.15
SHCBP1-201ENST00000303383 RDM1Q8NG50 284 aa16■□□□□ 0.15
SHCBP1-201ENST00000303383 SMCR8Q8TEV9 937 aaPredicted RBP16■□□□□ 0.15
SHCBP1-201ENST00000303383 ATP6V0A1Q93050 837 aa16■□□□□ 0.15
SHCBP1-201ENST00000303383 MOV10L1Q9BXT6 1211 aaKnown RBP16■□□□□ 0.15
SHCBP1-201ENST00000303383 JPH1Q9HDC5 661 aaPredicted RBP16■□□□□ 0.15
SHCBP1-201ENST00000303383 OLFML3Q9NRN5 406 aa16■□□□□ 0.15
SHCBP1-201ENST00000303383 LARSQ9P2J5 1176 aaKnown RBP16■□□□□ 0.15
SHCBP1-201ENST00000303383 PSAPP07602 524 aa16■□□□□ 0.15
SHCBP1-201ENST00000303383 FXR1P51114 621 aaKnown RBP eCLIP16■□□□□ 0.15
SHCBP1-201ENST00000303383 UTP14CQ5TAP6 766 aaKnown RBP16■□□□□ 0.15
SHCBP1-201ENST00000303383 SYCP3Q8IZU3 236 aa16■□□□□ 0.15
SHCBP1-201ENST00000303383 TMX1Q9H3N1 280 aa16■□□□□ 0.15
SHCBP1-201ENST00000303383 ZNHIT6Q9NWK9 470 aaKnown RBP16■□□□□ 0.15
SHCBP1-201ENST00000303383 SLC9A2Q9UBY0 812 aa16■□□□□ 0.15
SHCBP1-201ENST00000303383 PNMA3Q9UL41 463 aa16■□□□□ 0.15
SHCBP1-201ENST00000303383 OTOFQ9HC10 1997 aa16■□□□□ 0.15
SHCBP1-201ENST00000303383 HIP1RO75146 1068 aa16■□□□□ 0.15
SHCBP1-201ENST00000303383 EIF3JO75822 258 aaKnown RBP16■□□□□ 0.15
SHCBP1-201ENST00000303383 NMT1P30419 496 aaKnown RBP16■□□□□ 0.15
SHCBP1-201ENST00000303383 KCTD2Q14681 263 aa16■□□□□ 0.15
SHCBP1-201ENST00000303383 EDRF1Q3B7T1 1238 aa16■□□□□ 0.15
SHCBP1-201ENST00000303383 E4F1Q66K89 784 aaPredicted RBP16■□□□□ 0.15
SHCBP1-201ENST00000303383 LRRC55Q6ZSA7 311 aa16■□□□□ 0.15
SHCBP1-201ENST00000303383 OTUD6AQ7L8S5 288 aa16■□□□□ 0.15
SHCBP1-201ENST00000303383 HS2ST1Q7LGA3 356 aa16■□□□□ 0.15
SHCBP1-201ENST00000303383 MMRN2Q9H8L6 949 aa16■□□□□ 0.15
SHCBP1-201ENST00000303383 PCDHB13Q9Y5F0 798 aa16■□□□□ 0.15
SHCBP1-201ENST00000303383 UTP18Q9Y5J1 556 aaKnown RBP eCLIP16■□□□□ 0.15
SHCBP1-201ENST00000303383 COPB2P35606 906 aa15.99■□□□□ 0.15
SHCBP1-201ENST00000303383 MKRN3Q13064 507 aaKnown RBP15.99■□□□□ 0.15
SHCBP1-201ENST00000303383 SMAP1Q8IYB5 467 aaPredicted RBP15.99■□□□□ 0.15
SHCBP1-201ENST00000303383 SH2D3AQ9BRG2 576 aa15.99■□□□□ 0.15
SHCBP1-201ENST00000303383 GABBR1Q9UBS5 961 aa15.99■□□□□ 0.15
SHCBP1-201ENST00000303383 DBR1Q9UK59 544 aaKnown RBP15.99■□□□□ 0.15
SHCBP1-201ENST00000303383 KIF2AO00139 706 aaPredicted RBP15.99■□□□□ 0.15
SHCBP1-201ENST00000303383 POTEJP0CG39 1038 aa15.99■□□□□ 0.15
SHCBP1-201ENST00000303383 GUCY2CP25092 1073 aa15.99■□□□□ 0.15
SHCBP1-201ENST00000303383 ALDH5A1P51649 535 aaPredicted RBP15.99■□□□□ 0.15
SHCBP1-201ENST00000303383 C4orf19Q8IY42 314 aa15.99■□□□□ 0.15
SHCBP1-201ENST00000303383 ZNF507Q8TCN5 953 aa15.99■□□□□ 0.15
SHCBP1-201ENST00000303383 KCTD10Q9H3F6 313 aa15.99■□□□□ 0.15
SHCBP1-201ENST00000303383 TYW1Q9NV66 732 aaKnown RBP15.99■□□□□ 0.15
SHCBP1-201ENST00000303383 WDR90Q96KV7 1748 aa15.99■□□□□ 0.15
SHCBP1-201ENST00000303383 PDXKO00764 312 aa15.99■□□□□ 0.15
SHCBP1-201ENST00000303383 CCNE2O96020 404 aa15.99■□□□□ 0.15
SHCBP1-201ENST00000303383 RARRES1P49788 294 aa15.99■□□□□ 0.15
SHCBP1-201ENST00000303383 ZCWPW2Q504Y3 356 aa15.99■□□□□ 0.15
SHCBP1-201ENST00000303383 PPP1R13BQ96KQ4 1090 aa15.99■□□□□ 0.15
SHCBP1-201ENST00000303383 SCN4AP35499 1836 aa15.98■□□□□ 0.15
SHCBP1-201ENST00000303383 PTPRFP10586 1907 aa15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms