RNA–Protein interactions for RNA: ENST00000302251.9

PDGFD-201, Transcript of platelet derived growth factor D, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PDGFD, Length 4,052 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFD-201ENST00000302251 CHN1P15882 459 aa13.16□□□□□ -0.3
PDGFD-201ENST00000302251 TMED2Q15363 201 aa13.16□□□□□ -0.3
PDGFD-201ENST00000302251 VCXQ9H320 206 aa13.16□□□□□ -0.3
PDGFD-201ENST00000302251 ETNK1Q9HBU6 452 aa13.16□□□□□ -0.3
PDGFD-201ENST00000302251 STK17AQ9UEE5 414 aa13.16□□□□□ -0.3
PDGFD-201ENST00000302251 WDR17Q8IZU2 1322 aa13.15□□□□□ -0.3
PDGFD-201ENST00000302251 MYMKA6NI61 221 aa13.15□□□□□ -0.3
PDGFD-201ENST00000302251 EVI5O60447 810 aa13.15□□□□□ -0.3
PDGFD-201ENST00000302251 PLCG2P16885 1265 aa13.15□□□□□ -0.3
PDGFD-201ENST00000302251 SNAP25P60880 206 aa13.15□□□□□ -0.3
PDGFD-201ENST00000302251 KCNB1Q14721 858 aa13.15□□□□□ -0.3
PDGFD-201ENST00000302251 MFSD14BQ5SR56 506 aa13.15□□□□□ -0.3
PDGFD-201ENST00000302251 FAM186BQ8IYM0 893 aa13.15□□□□□ -0.3
PDGFD-201ENST00000302251 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.15□□□□□ -0.3
PDGFD-201ENST00000302251 PCDHA6Q9UN73 950 aa13.15□□□□□ -0.3
PDGFD-201ENST00000302251 THRAP3Q9Y2W1 955 aaKnown RBP13.15□□□□□ -0.3
PDGFD-201ENST00000302251 PCDHA8Q9Y5H6 950 aa13.15□□□□□ -0.3
PDGFD-201ENST00000302251 CCDC188H7C350 402 aa13.15□□□□□ -0.3
PDGFD-201ENST00000302251 WNT7AO00755 349 aa13.15□□□□□ -0.3
PDGFD-201ENST00000302251 GNPATO15228 680 aa13.15□□□□□ -0.3
PDGFD-201ENST00000302251 ATF7P17544 494 aaPredicted RBP13.15□□□□□ -0.3
PDGFD-201ENST00000302251 BTDP43251 543 aa13.15□□□□□ -0.3
PDGFD-201ENST00000302251 PMS2P54278 862 aa13.15□□□□□ -0.3
PDGFD-201ENST00000302251 TROAPQ12815 778 aa13.15□□□□□ -0.3
PDGFD-201ENST00000302251 GLG1Q92896 1179 aa13.15□□□□□ -0.3
PDGFD-201ENST00000302251 ZC3H12CQ9C0D7 883 aaKnown RBP13.15□□□□□ -0.3
PDGFD-201ENST00000302251 TMEM94Q12767 1356 aa13.15□□□□□ -0.3
PDGFD-201ENST00000302251 PASKQ96RG2 1323 aa13.15□□□□□ -0.3
PDGFD-201ENST00000302251 POTEB3A0JP26 581 aa13.15□□□□□ -0.3
PDGFD-201ENST00000302251 POTECB2RU33 542 aa13.15□□□□□ -0.3
PDGFD-201ENST00000302251 SLC9A1P19634 815 aa13.15□□□□□ -0.3
PDGFD-201ENST00000302251 COASYQ13057 564 aa13.15□□□□□ -0.3
PDGFD-201ENST00000302251 CDC37Q16543 378 aaPredicted RBP13.15□□□□□ -0.3
PDGFD-201ENST00000302251 ERFEQ4G0M1 354 aa13.15□□□□□ -0.3
PDGFD-201ENST00000302251 POTEBQ6S5H4 581 aa13.15□□□□□ -0.3
PDGFD-201ENST00000302251 SGSM3Q96HU1 749 aa13.15□□□□□ -0.3
PDGFD-201ENST00000302251 BHMT2Q9H2M3 363 aa13.15□□□□□ -0.3
PDGFD-201ENST00000302251 PARP4Q9UKK3 1724 aaKnown RBP13.15□□□□□ -0.3
PDGFD-201ENST00000302251 JCADQ9P266 1359 aa13.15□□□□□ -0.31
PDGFD-201ENST00000302251 CRKLP46109 303 aaKnown RBP13.14□□□□□ -0.31
PDGFD-201ENST00000302251 PDE6CP51160 858 aa13.14□□□□□ -0.31
PDGFD-201ENST00000302251 RBBP5Q15291 538 aaKnown RBP13.14□□□□□ -0.31
PDGFD-201ENST00000302251 AEBP2Q6ZN18 517 aaPredicted RBP13.14□□□□□ -0.31
PDGFD-201ENST00000302251 CREG2Q8IUH2 290 aa13.14□□□□□ -0.31
PDGFD-201ENST00000302251 NKX2-3Q8TAU0 364 aa13.14□□□□□ -0.31
PDGFD-201ENST00000302251 GBP5Q96PP8 586 aa13.14□□□□□ -0.31
PDGFD-201ENST00000302251 USH1CQ9Y6N9 552 aa13.14□□□□□ -0.31
PDGFD-201ENST00000302251 LAMB4A4D0S4 1761 aa13.14□□□□□ -0.31
PDGFD-201ENST00000302251 USP17L15C9J2P7 530 aa13.14□□□□□ -0.31
PDGFD-201ENST00000302251 USP17L13C9JLJ4 530 aa13.14□□□□□ -0.31
PDGFD-201ENST00000302251 USP17L11C9JVI0 530 aa13.14□□□□□ -0.31
PDGFD-201ENST00000302251 USP17L18D6R9N7 530 aa13.14□□□□□ -0.31
PDGFD-201ENST00000302251 USP17L22D6RA61 530 aa13.14□□□□□ -0.31
PDGFD-201ENST00000302251 USP17L17D6RBQ6 530 aa13.14□□□□□ -0.31
PDGFD-201ENST00000302251 USP17L19D6RCP7 530 aa13.14□□□□□ -0.31
PDGFD-201ENST00000302251 USP17L20D6RJB6 530 aa13.14□□□□□ -0.31
PDGFD-201ENST00000302251 FERP16591 822 aa13.14□□□□□ -0.31
PDGFD-201ENST00000302251 USP17L24Q0WX57 530 aa13.14□□□□□ -0.31
PDGFD-201ENST00000302251 TRADDQ15628 312 aa13.14□□□□□ -0.31
PDGFD-201ENST00000302251 TTMPQ5BVD1 217 aa13.14□□□□□ -0.31
PDGFD-201ENST00000302251 ODR4Q5SWX8 454 aa13.14□□□□□ -0.31
PDGFD-201ENST00000302251 NT5DC1Q5TFE4 455 aa13.14□□□□□ -0.31
PDGFD-201ENST00000302251 CAPRIN2Q6IMN6 1127 aaKnown RBP13.14□□□□□ -0.31
PDGFD-201ENST00000302251 TTI2Q6NXR4 508 aa13.14□□□□□ -0.31
PDGFD-201ENST00000302251 USP17L6PQ6QN14 398 aa13.14□□□□□ -0.31
PDGFD-201ENST00000302251 PIGOQ8TEQ8 1089 aa13.14□□□□□ -0.31
PDGFD-201ENST00000302251 NSMCE1Q8WV22 266 aa13.14□□□□□ -0.31
PDGFD-201ENST00000302251 RAB3IPQ96QF0 476 aaPredicted RBP13.14□□□□□ -0.31
PDGFD-201ENST00000302251 PITPNM3Q9BZ71 974 aa13.14□□□□□ -0.31
PDGFD-201ENST00000302251 AFDNP55196 1824 aaKnown RBP13.14□□□□□ -0.31
PDGFD-201ENST00000302251 TCP11X1B4DZS4 312 aa13.14□□□□□ -0.31
PDGFD-201ENST00000302251 EIF3BP55884 814 aaKnown RBP13.14□□□□□ -0.31
PDGFD-201ENST00000302251 SLC18A3Q16572 532 aa13.14□□□□□ -0.31
PDGFD-201ENST00000302251 NBPF9Q3BBW0 867 aa13.14□□□□□ -0.31
PDGFD-201ENST00000302251 SGO2Q562F6 1265 aa13.14□□□□□ -0.31
PDGFD-201ENST00000302251 C6orf118Q5T5N4 469 aa13.14□□□□□ -0.31
PDGFD-201ENST00000302251 CCDC62Q6P9F0 684 aa13.14□□□□□ -0.31
PDGFD-201ENST00000302251 RFX8Q6ZV50 586 aa13.14□□□□□ -0.31
PDGFD-201ENST00000302251 GUF1Q8N442 669 aaKnown RBP13.14□□□□□ -0.31
PDGFD-201ENST00000302251 LRRC8CQ8TDW0 803 aa13.14□□□□□ -0.31
PDGFD-201ENST00000302251 ECT2Q9H8V3 914 aa13.14□□□□□ -0.31
PDGFD-201ENST00000302251 METTL14Q9HCE5 456 aaKnown RBP13.14□□□□□ -0.31
PDGFD-201ENST00000302251 UBE2TQ9NPD8 197 aaPredicted RBP13.14□□□□□ -0.31
PDGFD-201ENST00000302251 REXO2Q9Y3B8 237 aaKnown RBP13.14□□□□□ -0.31
PDGFD-201ENST00000302251 USP17L5A8MUK1 530 aa13.13□□□□□ -0.31
PDGFD-201ENST00000302251 SCNN1DP51172 638 aa13.13□□□□□ -0.31
PDGFD-201ENST00000302251 GTF2IP78347 998 aa13.13□□□□□ -0.31
PDGFD-201ENST00000302251 PPP2R5EQ16537 467 aa13.13□□□□□ -0.31
PDGFD-201ENST00000302251 PDXDC2PQ6P474 469 aa13.13□□□□□ -0.31
PDGFD-201ENST00000302251 RAPGEF5Q92565 580 aa13.13□□□□□ -0.31
PDGFD-201ENST00000302251 ZNF148Q9UQR1 794 aa13.13□□□□□ -0.31
PDGFD-201ENST00000302251 L3MBTL1Q9Y468 752 aa13.13□□□□□ -0.31
PDGFD-201ENST00000302251 PCP11498 1178 aaKnown RBP13.13□□□□□ -0.31
PDGFD-201ENST00000302251 ATF2P15336 505 aa13.13□□□□□ -0.31
PDGFD-201ENST00000302251 STAT3P40763 770 aa13.13□□□□□ -0.31
PDGFD-201ENST00000302251 MSH2P43246 934 aa13.13□□□□□ -0.31
PDGFD-201ENST00000302251 RASSF2P50749 326 aa13.13□□□□□ -0.31
PDGFD-201ENST00000302251 PKN1Q16512 942 aa13.13□□□□□ -0.31
PDGFD-201ENST00000302251 DGKHQ86XP1 1220 aa13.13□□□□□ -0.31
PDGFD-201ENST00000302251 CTAGE3PQ8IX95 158 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms