RNA–Protein interactions for RNA: ENST00000301280.9

CHAF1A-201, Transcript of chromatin assembly factor 1 subunit A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHAF1A, Length 3,339 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHAF1A-201ENST00000301280 PSME4Q14997 1843 aa17.11■□□□□ 0.33
CHAF1A-201ENST00000301280 PEX10O60683 326 aa17.11■□□□□ 0.33
CHAF1A-201ENST00000301280 SNHG28P0DPA3 235 aa17.11■□□□□ 0.33
CHAF1A-201ENST00000301280 HOXA10P31260 410 aaPredicted RBP17.11■□□□□ 0.33
CHAF1A-201ENST00000301280 HOXA7P31268 230 aaPredicted RBP17.11■□□□□ 0.33
CHAF1A-201ENST00000301280 SOX10P56693 466 aa17.11■□□□□ 0.33
CHAF1A-201ENST00000301280 TAF4BQ92750 862 aa17.11■□□□□ 0.33
CHAF1A-201ENST00000301280 DNAJC19Q96DA6 116 aa17.11■□□□□ 0.33
CHAF1A-201ENST00000301280 EIF2AK1Q9BQI3 630 aaKnown RBP17.11■□□□□ 0.33
CHAF1A-201ENST00000301280 FAM204AQ9H8W3 233 aa17.11■□□□□ 0.33
CHAF1A-201ENST00000301280 HARSP12081 509 aaKnown RBP17.11■□□□□ 0.33
CHAF1A-201ENST00000301280 KCNMA1Q12791 1236 aa17.11■□□□□ 0.33
CHAF1A-201ENST00000301280 HOOK2Q96ED9 719 aa17.11■□□□□ 0.33
CHAF1A-201ENST00000301280 ZNF341Q9BYN7 854 aa17.11■□□□□ 0.33
CHAF1A-201ENST00000301280 RAVER2Q9HCJ3 691 aaKnown RBP17.11■□□□□ 0.33
CHAF1A-201ENST00000301280 ACP6Q9NPH0 428 aa17.11■□□□□ 0.33
CHAF1A-201ENST00000301280 PSMD14O00487 310 aa17.1■□□□□ 0.33
CHAF1A-201ENST00000301280 EXOC3O60645 756 aa17.1■□□□□ 0.33
CHAF1A-201ENST00000301280 ARP10275 920 aa17.1■□□□□ 0.33
CHAF1A-201ENST00000301280 MEA1Q16626 185 aa17.1■□□□□ 0.33
CHAF1A-201ENST00000301280 HAUS3Q68CZ6 603 aa17.1■□□□□ 0.33
CHAF1A-201ENST00000301280 CC2D2BQ6DHV5 1058 aa17.1■□□□□ 0.33
CHAF1A-201ENST00000301280 SIAH1Q8IUQ4 282 aa17.1■□□□□ 0.33
CHAF1A-201ENST00000301280 NT5C3AQ9H0P0 336 aa17.1■□□□□ 0.33
CHAF1A-201ENST00000301280 MYO3BQ8WXR4 1341 aa17.1■□□□□ 0.33
CHAF1A-201ENST00000301280 CCDC169A6NNP5 214 aa17.1■□□□□ 0.33
CHAF1A-201ENST00000301280 CALCAP01258 141 aa17.1■□□□□ 0.33
CHAF1A-201ENST00000301280 EXOC3L4Q17RC7 722 aa17.1■□□□□ 0.33
CHAF1A-201ENST00000301280 ARSHQ5FYA8 562 aa17.1■□□□□ 0.33
CHAF1A-201ENST00000301280 MUM1L1Q5H9M0 696 aa17.1■□□□□ 0.33
CHAF1A-201ENST00000301280 C8orf74Q6P047 294 aa17.1■□□□□ 0.33
CHAF1A-201ENST00000301280 C10orf67Q8IYJ2 551 aa17.1■□□□□ 0.33
CHAF1A-201ENST00000301280 ZNF668Q96K58 619 aaPredicted RBP17.1■□□□□ 0.33
CHAF1A-201ENST00000301280 CCDC17Q96LX7 622 aa17.1■□□□□ 0.33
CHAF1A-201ENST00000301280 ZNF577Q9BSK1 485 aa17.1■□□□□ 0.33
CHAF1A-201ENST00000301280 KIFC3Q9BVG8 833 aa17.1■□□□□ 0.33
CHAF1A-201ENST00000301280 FXR2P51116 673 aaKnown RBP eCLIP17.09■□□□□ 0.331e-6■■■■□ 26.4
CHAF1A-201ENST00000301280 TUBB4BP68371 445 aa17.09■□□□□ 0.33
CHAF1A-201ENST00000301280 DACT2Q5SW24 774 aa17.09■□□□□ 0.33
CHAF1A-201ENST00000301280 DDX42Q86XP3 938 aaKnown RBP eCLIP17.09■□□□□ 0.33
CHAF1A-201ENST00000301280 NOX5Q96PH1 765 aa17.09■□□□□ 0.33
CHAF1A-201ENST00000301280 GCNT4Q9P109 453 aa17.09■□□□□ 0.33
CHAF1A-201ENST00000301280 RBBP6Q7Z6E9 1792 aaKnown RBP17.09■□□□□ 0.33
CHAF1A-201ENST00000301280 AKAP3O75969 853 aa17.09■□□□□ 0.33
CHAF1A-201ENST00000301280 LEKR1Q6ZMV7 388 aa17.09■□□□□ 0.33
CHAF1A-201ENST00000301280 TMEM179Q6ZVK1 233 aa17.09■□□□□ 0.33
CHAF1A-201ENST00000301280 FAM178BQ8IXR5 827 aa17.09■□□□□ 0.33
CHAF1A-201ENST00000301280 TXLNBQ8N3L3 684 aa17.09■□□□□ 0.33
CHAF1A-201ENST00000301280 AKT1S1Q96B36 256 aa17.09■□□□□ 0.33
CHAF1A-201ENST00000301280 EHD4Q9H223 541 aa17.09■□□□□ 0.33
CHAF1A-201ENST00000301280 RBM12Q9NTZ6 932 aaKnown RBP17.09■□□□□ 0.33
CHAF1A-201ENST00000301280 RAB21Q9UL25 225 aa17.09■□□□□ 0.33
CHAF1A-201ENST00000301280 CCPG1Q9ULG6 757 aa17.09■□□□□ 0.33
CHAF1A-201ENST00000301280 AMPD2Q01433 879 aa17.09■□□□□ 0.33
CHAF1A-201ENST00000301280 ZFYVE27Q5T4F4 411 aa17.09■□□□□ 0.33
CHAF1A-201ENST00000301280 MAATS1Q7Z4T9 603 aa17.09■□□□□ 0.33
CHAF1A-201ENST00000301280 MSANTD4Q8NCY6 345 aa17.09■□□□□ 0.33
CHAF1A-201ENST00000301280 HNRNPLLQ8WVV9 542 aaKnown RBP17.09■□□□□ 0.33
CHAF1A-201ENST00000301280 EPB41L5Q9HCM4 733 aa17.09■□□□□ 0.33
CHAF1A-201ENST00000301280 GPRC5CQ9NQ84 441 aa17.09■□□□□ 0.33
CHAF1A-201ENST00000301280 NFU1Q9UMS0 254 aa17.09■□□□□ 0.33
CHAF1A-201ENST00000301280 IBSPP21815 317 aaPredicted RBP17.08■□□□□ 0.33
CHAF1A-201ENST00000301280 HPDP32754 393 aaPredicted RBP17.08■□□□□ 0.33
CHAF1A-201ENST00000301280 GGCXP38435 758 aa17.08■□□□□ 0.33
CHAF1A-201ENST00000301280 DLK2Q6UY11 383 aa17.08■□□□□ 0.33
CHAF1A-201ENST00000301280 LRRC55Q6ZSA7 311 aa17.08■□□□□ 0.33
CHAF1A-201ENST00000301280 OSBPL9Q96SU4 736 aa17.08■□□□□ 0.33
CHAF1A-201ENST00000301280 GOPCQ9HD26 462 aa17.08■□□□□ 0.33
CHAF1A-201ENST00000301280 YDJCA8MPS7 323 aa17.08■□□□□ 0.32
CHAF1A-201ENST00000301280 GJC1P36383 396 aa17.08■□□□□ 0.32
CHAF1A-201ENST00000301280 BRD3Q15059 726 aa17.08■□□□□ 0.32
CHAF1A-201ENST00000301280 SLC27A3Q5K4L6 730 aa17.08■□□□□ 0.32
CHAF1A-201ENST00000301280 SH2D3CQ8N5H7 860 aa17.08■□□□□ 0.32
CHAF1A-201ENST00000301280 DPH5Q9H2P9 285 aa17.08■□□□□ 0.32
CHAF1A-201ENST00000301280 ARHGEF10LQ9HCE6 1279 aa17.08■□□□□ 0.32
CHAF1A-201ENST00000301280 PVALEFA0A1B0GWK0 134 aa17.08■□□□□ 0.32
CHAF1A-201ENST00000301280 ARHGEF35A5YM69 484 aa17.08■□□□□ 0.32
CHAF1A-201ENST00000301280 RNF40O75150 1001 aa17.08■□□□□ 0.32
CHAF1A-201ENST00000301280 PTK2Q05397 1052 aa17.08■□□□□ 0.32
CHAF1A-201ENST00000301280 ZNF211Q13398 564 aaPredicted RBP17.08■□□□□ 0.32
CHAF1A-201ENST00000301280 FIGNQ5HY92 759 aa17.08■□□□□ 0.32
CHAF1A-201ENST00000301280 L1RE1Q9UN81 338 aa17.08■□□□□ 0.32
CHAF1A-201ENST00000301280 PLAGL2Q9UPG8 496 aa17.08■□□□□ 0.32
CHAF1A-201ENST00000301280 EIF3CLB5ME19 914 aaKnown RBP17.07■□□□□ 0.32
CHAF1A-201ENST00000301280 GCOM1H8Y6P7 765 aaPredicted RBP17.07■□□□□ 0.32
CHAF1A-201ENST00000301280 FLOT1O75955 427 aa17.07■□□□□ 0.32
CHAF1A-201ENST00000301280 POLR2MP0CAP2 368 aa17.07■□□□□ 0.32
CHAF1A-201ENST00000301280 PPP1R2P41236 205 aa17.07■□□□□ 0.32
CHAF1A-201ENST00000301280 CDK17Q00537 523 aa17.07■□□□□ 0.32
CHAF1A-201ENST00000301280 SLC20A2Q08357 652 aa17.07■□□□□ 0.32
CHAF1A-201ENST00000301280 GLYCTKQ8IVS8 523 aa17.07■□□□□ 0.32
CHAF1A-201ENST00000301280 EHBP1Q8NDI1 1231 aa17.07■□□□□ 0.32
CHAF1A-201ENST00000301280 TRIM58Q8NG06 486 aa17.07■□□□□ 0.32
CHAF1A-201ENST00000301280 EIF3CQ99613 913 aaKnown RBP17.07■□□□□ 0.32
CHAF1A-201ENST00000301280 SIK3Q9Y2K2 1263 aa17.07■□□□□ 0.32
CHAF1A-201ENST00000301280 CDR1P51861 262 aa17.07■□□□□ 0.32
CHAF1A-201ENST00000301280 PDIA5Q14554 519 aa17.07■□□□□ 0.32
CHAF1A-201ENST00000301280 C2CD6Q53TS8 623 aa17.07■□□□□ 0.32
CHAF1A-201ENST00000301280 PDXDC1Q6P996 788 aa17.07■□□□□ 0.32
CHAF1A-201ENST00000301280 HHIPL2Q6UWX4 724 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms