RNA–Protein interactions for RNA: ENST00000300933.8

TPM4-201, Transcript of tropomyosin 4, humanhuman

TSL 1 (best) BASIC

Gene TPM4, Length 2,666 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-201ENST00000300933 JAKMIP2Q96AA8 810 aa24.14■■□□□ 1.45
TPM4-201ENST00000300933 NAPGQ99747 312 aaPredicted RBP24.14■■□□□ 1.45
TPM4-201ENST00000300933 UTP18Q9Y5J1 556 aaKnown RBP eCLIP24.14■■□□□ 1.45
TPM4-201ENST00000300933 FRMD3A2A2Y4 597 aa24.13■■□□□ 1.45
TPM4-201ENST00000300933 NMT1P30419 496 aaKnown RBP24.13■■□□□ 1.45
TPM4-201ENST00000300933 EIF4A3P38919 411 aaKnown RBP24.13■■□□□ 1.45
TPM4-201ENST00000300933 ANKRD13CQ8N6S4 541 aa24.13■■□□□ 1.45
TPM4-201ENST00000300933 WDR11Q9BZH6 1224 aa24.13■■□□□ 1.45
TPM4-201ENST00000300933 UNC45AQ9H3U1 944 aa24.13■■□□□ 1.45
TPM4-201ENST00000300933 IVLP07476 585 aa24.13■■□□□ 1.45
TPM4-201ENST00000300933 ITGB5P18084 799 aa24.13■■□□□ 1.45
TPM4-201ENST00000300933 PTGER2P43116 358 aa24.13■■□□□ 1.45
TPM4-201ENST00000300933 PRELPP51888 382 aa24.13■■□□□ 1.45
TPM4-201ENST00000300933 SLC16A10Q8TF71 515 aa24.13■■□□□ 1.45
TPM4-201ENST00000300933 EFCC1Q9HA90 598 aa24.13■■□□□ 1.45
TPM4-201ENST00000300933 CYLC1P35663 651 aaPredicted RBP24.12■■□□□ 1.45
TPM4-201ENST00000300933 MTMR2Q13614 643 aa24.12■■□□□ 1.45
TPM4-201ENST00000300933 CASP8Q14790 479 aa24.12■■□□□ 1.45
TPM4-201ENST00000300933 WNK4Q96J92 1243 aa24.12■■□□□ 1.45
TPM4-201ENST00000300933 LSM14BQ9BX40 385 aaKnown RBP24.12■■□□□ 1.45
TPM4-201ENST00000300933 RAB21Q9UL25 225 aa24.12■■□□□ 1.45
TPM4-201ENST00000300933 SYNPO2Q9UMS6 1093 aa24.12■■□□□ 1.45
TPM4-201ENST00000300933 PLAGL2Q9UPG8 496 aa24.12■■□□□ 1.45
TPM4-201ENST00000300933 FLOT1O75955 427 aa24.12■■□□□ 1.45
TPM4-201ENST00000300933 CASP4P49662 377 aa24.12■■□□□ 1.45
TPM4-201ENST00000300933 HSP90B2PQ58FF3 399 aa24.12■■□□□ 1.45
TPM4-201ENST00000300933 FAM160B2Q86V87 743 aa24.12■■□□□ 1.45
TPM4-201ENST00000300933 BAP1Q92560 729 aa24.12■■□□□ 1.45
TPM4-201ENST00000300933 ZKSCAN4Q969J2 545 aaPredicted RBP24.12■■□□□ 1.45
TPM4-201ENST00000300933 SH2D4AQ9H788 454 aa24.12■■□□□ 1.45
TPM4-201ENST00000300933 RNF216Q9NWF9 866 aaPredicted RBP24.12■■□□□ 1.45
TPM4-201ENST00000300933 HACL1Q9UJ83 578 aa24.12■■□□□ 1.45
TPM4-201ENST00000300933 PCNTO95613 3336 aa24.12■■□□□ 1.45
TPM4-201ENST00000300933 PITPNM2Q9BZ72 1349 aa24.12■■□□□ 1.45
TPM4-201ENST00000300933 TBCAO75347 108 aaKnown RBP24.11■■□□□ 1.45
TPM4-201ENST00000300933 ACTN1P12814 892 aa24.11■■□□□ 1.45
TPM4-201ENST00000300933 POLR2FP61218 127 aaKnown RBP24.11■■□□□ 1.45
TPM4-201ENST00000300933 PLS1Q14651 629 aa24.11■■□□□ 1.45
TPM4-201ENST00000300933 MYCT1Q8N699 235 aa24.11■■□□□ 1.45
TPM4-201ENST00000300933 MSANTD4Q8NCY6 345 aa24.11■■□□□ 1.45
TPM4-201ENST00000300933 DEF6Q9H4E7 631 aa24.11■■□□□ 1.45
TPM4-201ENST00000300933 IPO5O00410 1097 aaKnown RBP24.11■■□□□ 1.45
TPM4-201ENST00000300933 NOL4O94818 638 aa24.11■■□□□ 1.45
TPM4-201ENST00000300933 EYA4O95677 639 aa24.11■■□□□ 1.45
TPM4-201ENST00000300933 ATP1A1P05023 1023 aaKnown RBP24.11■■□□□ 1.45
TPM4-201ENST00000300933 DRC1Q96MC2 740 aa24.11■■□□□ 1.45
TPM4-201ENST00000300933 POLR3CQ9BUI4 534 aaPredicted RBP24.11■■□□□ 1.45
TPM4-201ENST00000300933 DEFB129Q9H1M3 183 aa24.11■■□□□ 1.45
TPM4-201ENST00000300933 CNOT7Q9UIV1 285 aaKnown RBP24.11■■□□□ 1.45
TPM4-201ENST00000300933 A0A1W2PQJ5 194 aa24.1■■□□□ 1.45
TPM4-201ENST00000300933 IPO7O95373 1038 aaKnown RBP24.1■■□□□ 1.45
TPM4-201ENST00000300933 KNOP1Q1ED39 458 aaKnown RBP24.1■■□□□ 1.45
TPM4-201ENST00000300933 TRIM59Q8IWR1 403 aa24.1■■□□□ 1.45
TPM4-201ENST00000300933 SLC5A5Q92911 643 aa24.1■■□□□ 1.45
TPM4-201ENST00000300933 TGFB2P61812 414 aa24.1■■□□□ 1.45
TPM4-201ENST00000300933 KRT83P78385 493 aa24.1■■□□□ 1.45
TPM4-201ENST00000300933 SPP2Q13103 211 aa24.1■■□□□ 1.45
TPM4-201ENST00000300933 FIGNQ5HY92 759 aa24.1■■□□□ 1.45
TPM4-201ENST00000300933 HAUS4Q9H6D7 363 aa24.1■■□□□ 1.45
TPM4-201ENST00000300933 CETN3O15182 167 aa24.09■■□□□ 1.45
TPM4-201ENST00000300933 EIF2AK2P19525 551 aaKnown RBP24.09■■□□□ 1.45
TPM4-201ENST00000300933 GFPT1Q06210 699 aaPredicted RBP24.09■■□□□ 1.45
TPM4-201ENST00000300933 KCNH2Q12809 1159 aa24.09■■□□□ 1.45
TPM4-201ENST00000300933 DCAF17Q5H9S7 520 aaPredicted RBP24.09■■□□□ 1.45
TPM4-201ENST00000300933 PRPF38AQ8NAV1 312 aaKnown RBP24.09■■□□□ 1.45
TPM4-201ENST00000300933 CAPZA3Q96KX2 299 aa24.09■■□□□ 1.45
TPM4-201ENST00000300933 POTEB2H3BUK9 544 aa24.09■■□□□ 1.45
TPM4-201ENST00000300933 TULP1O00294 542 aaPredicted RBP24.09■■□□□ 1.45
TPM4-201ENST00000300933 AKR1B10O60218 316 aa24.09■■□□□ 1.45
TPM4-201ENST00000300933 ICAM1P05362 532 aa24.09■■□□□ 1.45
TPM4-201ENST00000300933 KIF11P52732 1056 aa24.09■■□□□ 1.45
TPM4-201ENST00000300933 COG2Q14746 738 aa24.09■■□□□ 1.45
TPM4-201ENST00000300933 TNIP1Q15025 636 aa24.09■■□□□ 1.45
TPM4-201ENST00000300933 TCERG1LQ5VWI1 586 aa24.09■■□□□ 1.45
TPM4-201ENST00000300933 GOLGA6L1Q8N7Z2 621 aa24.09■■□□□ 1.45
TPM4-201ENST00000300933 NOA1Q8NC60 698 aaKnown RBP24.09■■□□□ 1.45
TPM4-201ENST00000300933 CLEC4DQ8WXI8 215 aa24.09■■□□□ 1.45
TPM4-201ENST00000300933 MLXIPQ9HAP2 919 aa24.09■■□□□ 1.45
TPM4-201ENST00000300933 PCDHB13Q9Y5F0 798 aa24.09■■□□□ 1.45
TPM4-201ENST00000300933 FAM170AA1A519 330 aa24.08■■□□□ 1.45
TPM4-201ENST00000300933 LRRIQ3A6PVS8 624 aaPredicted RBP24.08■■□□□ 1.45
TPM4-201ENST00000300933 EIF3CLB5ME19 914 aaKnown RBP24.08■■□□□ 1.45
TPM4-201ENST00000300933 AKAP3O75969 853 aa24.08■■□□□ 1.45
TPM4-201ENST00000300933 EPS15P42566 896 aa24.08■■□□□ 1.45
TPM4-201ENST00000300933 TDRD12Q587J7 1177 aaKnown RBP24.08■■□□□ 1.45
TPM4-201ENST00000300933 EIF3CQ99613 913 aaKnown RBP24.08■■□□□ 1.45
TPM4-201ENST00000300933 CTAGE15A4D2H0 777 aa24.08■■□□□ 1.45
TPM4-201ENST00000300933 TMEM150BA6NC51 233 aa24.08■■□□□ 1.45
TPM4-201ENST00000300933 CTAGE8P0CG41 777 aa24.08■■□□□ 1.45
TPM4-201ENST00000300933 MAP3K10Q02779 954 aa24.08■■□□□ 1.45
TPM4-201ENST00000300933 PRKG1Q13976 671 aa24.08■■□□□ 1.45
TPM4-201ENST00000300933 R3HDM1Q15032 1099 aaKnown RBP24.08■■□□□ 1.45
TPM4-201ENST00000300933 CTAGE6Q86UF2 777 aa24.08■■□□□ 1.45
TPM4-201ENST00000300933 CTAGE4Q8IX94 777 aa24.08■■□□□ 1.45
TPM4-201ENST00000300933 CEP63Q96MT8 703 aa24.08■■□□□ 1.45
TPM4-201ENST00000300933 FAM204AQ9H8W3 233 aa24.08■■□□□ 1.45
TPM4-201ENST00000300933 KCNH7Q9NS40 1196 aa24.08■■□□□ 1.45
TPM4-201ENST00000300933 FAM13AO94988 1023 aa24.07■■□□□ 1.44
TPM4-201ENST00000300933 SLC9A1P19634 815 aa24.07■■□□□ 1.44
TPM4-201ENST00000300933 SPA17Q15506 151 aa24.07■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms