RNA–Protein interactions for RNA: ENST00000300862.7

HIF3A-204, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene HIF3A, Length 2,551 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-204ENST00000300862 MAGEA9P43362 315 aa14.16□□□□□ -0.14
HIF3A-204ENST00000300862 MARSP56192 900 aaKnown RBP14.16□□□□□ -0.14
HIF3A-204ENST00000300862 PTK2Q05397 1052 aa14.16□□□□□ -0.14
HIF3A-204ENST00000300862 CTTNQ14247 550 aaKnown RBP14.16□□□□□ -0.14
HIF3A-204ENST00000300862 KNOP1Q1ED39 458 aaKnown RBP14.16□□□□□ -0.14
HIF3A-204ENST00000300862 TATDN1Q6P1N9 297 aa14.16□□□□□ -0.14
HIF3A-204ENST00000300862 TMEM179Q6ZVK1 233 aa14.16□□□□□ -0.14
HIF3A-204ENST00000300862 SYT2Q8N9I0 419 aaPredicted RBP14.16□□□□□ -0.14
HIF3A-204ENST00000300862 ARMCX3Q9UH62 379 aaPredicted RBP14.16□□□□□ -0.14
HIF3A-204ENST00000300862 FAM184BQ9ULE4 1060 aa14.16□□□□□ -0.14
HIF3A-204ENST00000300862 GREB1LQ9C091 1923 aaPredicted RBP14.16□□□□□ -0.14
HIF3A-204ENST00000300862 PDE6BP35913 854 aa14.16□□□□□ -0.14
HIF3A-204ENST00000300862 ECE1P42892 770 aa14.16□□□□□ -0.14
HIF3A-204ENST00000300862 NAB2Q15742 525 aa14.16□□□□□ -0.14
HIF3A-204ENST00000300862 GJB7Q6PEY0 223 aa14.16□□□□□ -0.14
HIF3A-204ENST00000300862 KSR1Q8IVT5 923 aa14.16□□□□□ -0.14
HIF3A-204ENST00000300862 ERMNQ8TAM6 284 aa14.16□□□□□ -0.14
HIF3A-204ENST00000300862 SYN2Q92777 582 aaPredicted RBP14.16□□□□□ -0.14
HIF3A-204ENST00000300862 GOLGA6BA6NDN3 693 aa14.15□□□□□ -0.14
HIF3A-204ENST00000300862 GCNT3O95395 438 aa14.15□□□□□ -0.14
HIF3A-204ENST00000300862 BMP3P12645 472 aa14.15□□□□□ -0.14
HIF3A-204ENST00000300862 SREBF1P36956 1147 aa14.15□□□□□ -0.14
HIF3A-204ENST00000300862 AOC3Q16853 763 aa14.15□□□□□ -0.14
HIF3A-204ENST00000300862 EDRF1Q3B7T1 1238 aa14.15□□□□□ -0.14
HIF3A-204ENST00000300862 C8orf74Q6P047 294 aa14.15□□□□□ -0.14
HIF3A-204ENST00000300862 ZNF572Q7Z3I7 529 aaPredicted RBP14.15□□□□□ -0.14
HIF3A-204ENST00000300862 ZNF571Q7Z3V5 609 aaPredicted RBP14.15□□□□□ -0.14
HIF3A-204ENST00000300862 RNF10Q8N5U6 811 aaKnown RBP14.15□□□□□ -0.14
HIF3A-204ENST00000300862 AFAP1L1Q8TED9 768 aa14.15□□□□□ -0.14
HIF3A-204ENST00000300862 SPAG5Q96R06 1193 aa14.15□□□□□ -0.14
HIF3A-204ENST00000300862 IDI2Q9BXS1 227 aa14.15□□□□□ -0.14
HIF3A-204ENST00000300862 NUCKS1Q9H1E3 243 aaKnown RBP14.15□□□□□ -0.14
HIF3A-204ENST00000300862 AJAP1Q9UKB5 411 aaPredicted RBP14.15□□□□□ -0.14
HIF3A-204ENST00000300862 PCDHB13Q9Y5F0 798 aa14.15□□□□□ -0.14
HIF3A-204ENST00000300862 SRCAPQ6ZRS2 3230 aa14.15□□□□□ -0.14
HIF3A-204ENST00000300862 PITPNM2Q9BZ72 1349 aa14.15□□□□□ -0.14
HIF3A-204ENST00000300862 SIPA1L1O43166 1804 aa14.15□□□□□ -0.14
HIF3A-204ENST00000300862 UCHL3P15374 230 aa14.15□□□□□ -0.14
HIF3A-204ENST00000300862 HSPA1LP34931 641 aa14.15□□□□□ -0.14
HIF3A-204ENST00000300862 Q4G0T1 1027 aa14.15□□□□□ -0.14
HIF3A-204ENST00000300862 KIAA1755Q5JYT7 1200 aa14.15□□□□□ -0.14
HIF3A-204ENST00000300862 STRIP1Q5VSL9 837 aa14.15□□□□□ -0.14
HIF3A-204ENST00000300862 TSEN2Q8NCE0 465 aaKnown RBP14.15□□□□□ -0.14
HIF3A-204ENST00000300862 EIF2AK1Q9BQI3 630 aaKnown RBP14.15□□□□□ -0.14
HIF3A-204ENST00000300862 AIPL1Q9NZN9 384 aa14.15□□□□□ -0.14
HIF3A-204ENST00000300862 STIM2Q9P246 746 aa14.15□□□□□ -0.14
HIF3A-204ENST00000300862 FRMD4AQ9P2Q2 1039 aaPredicted RBP14.15□□□□□ -0.14
HIF3A-204ENST00000300862 VAV3Q9UKW4 847 aa14.15□□□□□ -0.14
HIF3A-204ENST00000300862 QSER1Q2KHR3 1735 aa14.15□□□□□ -0.15
HIF3A-204ENST00000300862 SCN9AQ15858 1988 aa14.14□□□□□ -0.15
HIF3A-204ENST00000300862 CFBP00751 764 aa14.14□□□□□ -0.15
HIF3A-204ENST00000300862 GLI1P08151 1106 aa14.14□□□□□ -0.15
HIF3A-204ENST00000300862 PON1P27169 355 aa14.14□□□□□ -0.15
HIF3A-204ENST00000300862 CHRNA5P30532 468 aa14.14□□□□□ -0.15
HIF3A-204ENST00000300862 CORO7P57737 925 aa14.14□□□□□ -0.15
HIF3A-204ENST00000300862 DPY19L2P1Q6NXN4 242 aa14.14□□□□□ -0.15
HIF3A-204ENST00000300862 C10orf71Q711Q0 1435 aa14.14□□□□□ -0.15
HIF3A-204ENST00000300862 IRF2BP2Q7Z5L9 587 aa14.14□□□□□ -0.15
HIF3A-204ENST00000300862 ZC3H3Q8IXZ2 948 aaKnown RBP14.14□□□□□ -0.15
HIF3A-204ENST00000300862 GOLGA6L1Q8N7Z2 621 aa14.14□□□□□ -0.15
HIF3A-204ENST00000300862 RBM46Q8TBY0 533 aaKnown RBP14.14□□□□□ -0.15
HIF3A-204ENST00000300862 PRMT6Q96LA8 375 aaPredicted RBP14.14□□□□□ -0.15
HIF3A-204ENST00000300862 PRR12Q9ULL5 1215 aa14.14□□□□□ -0.15
HIF3A-204ENST00000300862 GRID2IPA4D2P6 1211 aa14.14□□□□□ -0.15
HIF3A-204ENST00000300862 AFPP02771 609 aaKnown RBP14.14□□□□□ -0.15
HIF3A-204ENST00000300862 NR3C1P04150 777 aa14.14□□□□□ -0.15
HIF3A-204ENST00000300862 XRCC5P13010 732 aaKnown RBP14.14□□□□□ -0.15
HIF3A-204ENST00000300862 HOXA7P31268 230 aaPredicted RBP14.14□□□□□ -0.15
HIF3A-204ENST00000300862 TRADDQ15628 312 aa14.14□□□□□ -0.15
HIF3A-204ENST00000300862 EXOC3L4Q17RC7 722 aa14.14□□□□□ -0.15
HIF3A-204ENST00000300862 TTC31Q49AM3 519 aaPredicted RBP14.14□□□□□ -0.15
HIF3A-204ENST00000300862 CFAP221Q4G0U5 840 aa14.14□□□□□ -0.15
HIF3A-204ENST00000300862 ZC2HC1CQ53FD0 456 aaPredicted RBP14.14□□□□□ -0.15
HIF3A-204ENST00000300862 MOXD1Q6UVY6 613 aa14.14□□□□□ -0.15
HIF3A-204ENST00000300862 EPM2AIP1Q7L775 607 aaPredicted RBP14.14□□□□□ -0.15
HIF3A-204ENST00000300862 TPH2Q8IWU9 490 aa14.14□□□□□ -0.15
HIF3A-204ENST00000300862 IFT81Q8WYA0 676 aa14.14□□□□□ -0.15
HIF3A-204ENST00000300862 CSRNP1Q96S65 589 aa14.14□□□□□ -0.15
HIF3A-204ENST00000300862 TRAF3IP3Q9Y228 551 aa14.14□□□□□ -0.15
HIF3A-204ENST00000300862 ASTN1O14525 1302 aa14.13□□□□□ -0.15
HIF3A-204ENST00000300862 TBCAO75347 108 aaKnown RBP14.13□□□□□ -0.15
HIF3A-204ENST00000300862 NMT1P30419 496 aaKnown RBP14.13□□□□□ -0.15
HIF3A-204ENST00000300862 CARSP49589 748 aaKnown RBP14.13□□□□□ -0.15
HIF3A-204ENST00000300862 ITIH3Q06033 890 aa14.13□□□□□ -0.15
HIF3A-204ENST00000300862 RBM26Q5T8P6 1007 aaKnown RBP14.13□□□□□ -0.15
HIF3A-204ENST00000300862 CCDC174Q6PII3 467 aa14.13□□□□□ -0.15
HIF3A-204ENST00000300862 PPP4R3CPQ6ZMV5 832 aa14.13□□□□□ -0.15
HIF3A-204ENST00000300862 GMCL1P1Q8NEA9 526 aa14.13□□□□□ -0.15
HIF3A-204ENST00000300862 ACER1Q8TDN7 264 aa14.13□□□□□ -0.15
HIF3A-204ENST00000300862 GMCL1Q96IK5 515 aa14.13□□□□□ -0.15
HIF3A-204ENST00000300862 RABGAP1Q9Y3P9 1069 aa14.13□□□□□ -0.15
HIF3A-204ENST00000300862 NRXN2Q9P2S2 1712 aa14.13□□□□□ -0.15
HIF3A-204ENST00000300862 ZYXQ15942 572 aaKnown RBP14.13□□□□□ -0.15
HIF3A-204ENST00000300862 ICE2Q659A1 982 aa14.13□□□□□ -0.15
HIF3A-204ENST00000300862 PROCA1Q8NCQ7 364 aaPredicted RBP14.13□□□□□ -0.15
HIF3A-204ENST00000300862 FAM20AQ96MK3 541 aa14.13□□□□□ -0.15
HIF3A-204ENST00000300862 KRT12Q99456 494 aa14.13□□□□□ -0.15
HIF3A-204ENST00000300862 WDR18Q9BV38 432 aa14.13□□□□□ -0.15
HIF3A-204ENST00000300862 LUC7LQ9NQ29 371 aaKnown RBP14.13□□□□□ -0.15
HIF3A-204ENST00000300862 TCP10L2B9ZVM9 353 aa14.12□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms