RNA–Protein interactions for RNA: ENST00000298130.4

SPTSSA-201, Transcript of serine palmitoyltransferase small subunit A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTSSA, Length 2,777 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTSSA-201ENST00000298130 KNOP1Q1ED39 458 aaKnown RBP26.71■■□□□ 1.87
SPTSSA-201ENST00000298130 DPY19L2P1Q6NXN4 242 aa26.71■■□□□ 1.87
SPTSSA-201ENST00000298130 ALKBH5Q6P6C2 394 aaKnown RBP26.71■■□□□ 1.87
SPTSSA-201ENST00000298130 MAATS1Q7Z4T9 603 aa26.71■■□□□ 1.87
SPTSSA-201ENST00000298130 ZNF219Q9P2Y4 722 aaPredicted RBP26.71■■□□□ 1.87
SPTSSA-201ENST00000298130 TSKSQ9UJT2 592 aa26.71■■□□□ 1.87
SPTSSA-201ENST00000298130 DNM3Q9UQ16 869 aa26.71■■□□□ 1.87
SPTSSA-201ENST00000298130 PAK2Q13177 524 aa26.71■■□□□ 1.87
SPTSSA-201ENST00000298130 ALS2CLQ60I27 953 aa26.71■■□□□ 1.87
SPTSSA-201ENST00000298130 SWAP70Q9UH65 585 aa26.71■■□□□ 1.87
SPTSSA-201ENST00000298130 AFPP02771 609 aaKnown RBP26.7■■□□□ 1.87
SPTSSA-201ENST00000298130 XRCC5P13010 732 aaKnown RBP26.7■■□□□ 1.87
SPTSSA-201ENST00000298130 ERVK-9P63128 1117 aa26.7■■□□□ 1.87
SPTSSA-201ENST00000298130 UBXN2AP68543 259 aa26.7■■□□□ 1.87
SPTSSA-201ENST00000298130 IQCKQ8N0W5 287 aa26.7■■□□□ 1.87
SPTSSA-201ENST00000298130 MICALL1Q8N3F8 863 aa26.7■■□□□ 1.87
SPTSSA-201ENST00000298130 ETNPPLQ8TBG4 499 aa26.7■■□□□ 1.87
SPTSSA-201ENST00000298130 NAGPAQ9UK23 515 aa26.7■■□□□ 1.87
SPTSSA-201ENST00000298130 ITGA4P13612 1032 aa26.7■■□□□ 1.86
SPTSSA-201ENST00000298130 NHSQ6T4R5 1651 aa26.7■■□□□ 1.86
SPTSSA-201ENST00000298130 EML1O00423 815 aa26.69■■□□□ 1.86
SPTSSA-201ENST00000298130 HPDP32754 393 aaPredicted RBP26.69■■□□□ 1.86
SPTSSA-201ENST00000298130 MARSP56192 900 aaKnown RBP26.69■■□□□ 1.86
SPTSSA-201ENST00000298130 SLC20A2Q08357 652 aa26.69■■□□□ 1.86
SPTSSA-201ENST00000298130 CTTNQ14247 550 aaKnown RBP26.69■■□□□ 1.86
SPTSSA-201ENST00000298130 ZC2HC1CQ53FD0 456 aaPredicted RBP26.69■■□□□ 1.86
SPTSSA-201ENST00000298130 FAM107BQ9H098 131 aa26.69■■□□□ 1.86
SPTSSA-201ENST00000298130 ADAMTSL1Q8N6G6 1762 aa26.69■■□□□ 1.86
SPTSSA-201ENST00000298130 GFPT2O94808 682 aa26.69■■□□□ 1.86
SPTSSA-201ENST00000298130 CERKLQ49MI3 558 aaPredicted RBP26.69■■□□□ 1.86
SPTSSA-201ENST00000298130 NAA35Q5VZE5 725 aa26.69■■□□□ 1.86
SPTSSA-201ENST00000298130 SIAH1Q8IUQ4 282 aa26.69■■□□□ 1.86
SPTSSA-201ENST00000298130 FAM169AQ9Y6X4 670 aa26.69■■□□□ 1.86
SPTSSA-201ENST00000298130 EBAG9O00559 213 aa26.69■■□□□ 1.86
SPTSSA-201ENST00000298130 KIF4AO95239 1232 aa26.69■■□□□ 1.86
SPTSSA-201ENST00000298130 GLE1Q53GS7 698 aaKnown RBP26.69■■□□□ 1.86
SPTSSA-201ENST00000298130 ADAT2Q7Z6V5 191 aaKnown RBP26.69■■□□□ 1.86
SPTSSA-201ENST00000298130 LENG9Q96B70 501 aa26.69■■□□□ 1.86
SPTSSA-201ENST00000298130 COA1Q9GZY4 146 aa26.69■■□□□ 1.86
SPTSSA-201ENST00000298130 NEUROG2Q9H2A3 272 aa26.69■■□□□ 1.86
SPTSSA-201ENST00000298130 ZNF831Q5JPB2 1677 aa26.69■■□□□ 1.86
SPTSSA-201ENST00000298130 NR3C1P04150 777 aa26.68■■□□□ 1.86
SPTSSA-201ENST00000298130 NMT1P30419 496 aaKnown RBP26.68■■□□□ 1.86
SPTSSA-201ENST00000298130 COG2Q14746 738 aa26.68■■□□□ 1.86
SPTSSA-201ENST00000298130 CEP85LQ5SZL2 805 aa26.68■■□□□ 1.86
SPTSSA-201ENST00000298130 U2AF1L4Q8WU68 220 aaKnown RBP26.68■■□□□ 1.86
SPTSSA-201ENST00000298130 TEKT1Q969V4 418 aa26.68■■□□□ 1.86
SPTSSA-201ENST00000298130 GCNT4Q9P109 453 aa26.68■■□□□ 1.86
SPTSSA-201ENST00000298130 FRMD3A2A2Y4 597 aa26.68■■□□□ 1.86
SPTSSA-201ENST00000298130 USP11P51784 963 aa26.68■■□□□ 1.86
SPTSSA-201ENST00000298130 SEC24CP53992 1094 aa26.68■■□□□ 1.86
SPTSSA-201ENST00000298130 PLAAQ9Y263 795 aa26.68■■□□□ 1.86
SPTSSA-201ENST00000298130 FLT3P36888 993 aa26.67■■□□□ 1.86
SPTSSA-201ENST00000298130 EDRF1Q3B7T1 1238 aa26.67■■□□□ 1.86
SPTSSA-201ENST00000298130 METTL13Q8N6R0 699 aa26.67■■□□□ 1.86
SPTSSA-201ENST00000298130 ASTN1O14525 1302 aa26.67■■□□□ 1.86
SPTSSA-201ENST00000298130 ARFGEF1Q9Y6D6 1849 aa26.67■■□□□ 1.86
SPTSSA-201ENST00000298130 NDUFAB1O14561 156 aa26.67■■□□□ 1.86
SPTSSA-201ENST00000298130 MSH4O15457 936 aa26.67■■□□□ 1.86
SPTSSA-201ENST00000298130 CRKP46108 304 aa26.67■■□□□ 1.86
SPTSSA-201ENST00000298130 JAG1P78504 1218 aa26.67■■□□□ 1.86
SPTSSA-201ENST00000298130 SPDYE3A6NKU9 549 aa26.66■■□□□ 1.86
SPTSSA-201ENST00000298130 F5H6K3 240 aa26.66■■□□□ 1.86
SPTSSA-201ENST00000298130 POLRMTO00411 1230 aaKnown RBP26.66■■□□□ 1.86
SPTSSA-201ENST00000298130 TNFRSF8P28908 595 aa26.66■■□□□ 1.86
SPTSSA-201ENST00000298130 KLRC3Q07444 240 aa26.66■■□□□ 1.86
SPTSSA-201ENST00000298130 TTC31Q49AM3 519 aaPredicted RBP26.66■■□□□ 1.86
SPTSSA-201ENST00000298130 SYT2Q8N9I0 419 aaPredicted RBP26.66■■□□□ 1.86
SPTSSA-201ENST00000298130 CELF4Q9BZC1 486 aaKnown RBP26.66■■□□□ 1.86
SPTSSA-201ENST00000298130 OSGEPQ9NPF4 335 aa26.66■■□□□ 1.86
SPTSSA-201ENST00000298130 AMACRQ9UHK6 382 aa26.66■■□□□ 1.86
SPTSSA-201ENST00000298130 SHTN1A0MZ66 631 aa26.66■■□□□ 1.86
SPTSSA-201ENST00000298130 ABCB4P21439 1286 aa26.66■■□□□ 1.86
SPTSSA-201ENST00000298130 COPB2P35606 906 aa26.66■■□□□ 1.86
SPTSSA-201ENST00000298130 ZNF76P36508 570 aa26.66■■□□□ 1.86
SPTSSA-201ENST00000298130 SH3BP5LQ7L8J4 393 aa26.66■■□□□ 1.86
SPTSSA-201ENST00000298130 SLFN12Q8IYM2 578 aa26.66■■□□□ 1.86
SPTSSA-201ENST00000298130 TRIM31Q9BZY9 425 aa26.66■■□□□ 1.86
SPTSSA-201ENST00000298130 RNF14Q9UBS8 474 aa26.66■■□□□ 1.86
SPTSSA-201ENST00000298130 HOXA10P31260 410 aaPredicted RBP26.65■■□□□ 1.86
SPTSSA-201ENST00000298130 ICA1Q05084 483 aa26.65■■□□□ 1.86
SPTSSA-201ENST00000298130 EPHA7Q15375 998 aa26.65■■□□□ 1.86
SPTSSA-201ENST00000298130 SLC35C1Q96A29 364 aa26.65■■□□□ 1.86
SPTSSA-201ENST00000298130 SIX2Q9NPC8 291 aa26.65■■□□□ 1.86
SPTSSA-201ENST00000298130 EPB41P11171 864 aaKnown RBP26.65■■□□□ 1.86
SPTSSA-201ENST00000298130 PLS1Q14651 629 aa26.65■■□□□ 1.86
SPTSSA-201ENST00000298130 SP8Q8IXZ3 490 aa26.65■■□□□ 1.86
SPTSSA-201ENST00000298130 TRAF3IP3Q9Y228 551 aa26.65■■□□□ 1.86
SPTSSA-201ENST00000298130 NOC2LQ9Y3T9 749 aaKnown RBP26.65■■□□□ 1.86
SPTSSA-201ENST00000298130 DDX3XO00571 662 aaKnown RBP eCLIP26.64■■□□□ 1.862e-29■□□□□ 10.1
SPTSSA-201ENST00000298130 RPA1P27694 616 aa26.64■■□□□ 1.86
SPTSSA-201ENST00000298130 TNNC1P63316 161 aa26.64■■□□□ 1.86
SPTSSA-201ENST00000298130 FOXR2Q6PJQ5 311 aa26.64■■□□□ 1.86
SPTSSA-201ENST00000298130 TPH2Q8IWU9 490 aa26.64■■□□□ 1.86
SPTSSA-201ENST00000298130 RDH13Q8NBN7 331 aa26.64■■□□□ 1.86
SPTSSA-201ENST00000298130 RUBCNQ92622 972 aa26.64■■□□□ 1.86
SPTSSA-201ENST00000298130 BCCIPQ9P287 314 aaKnown RBP eCLIP26.64■■□□□ 1.865e-9■□□□□ 9.5
SPTSSA-201ENST00000298130 SART1O43290 800 aaKnown RBP26.64■■□□□ 1.86
SPTSSA-201ENST00000298130 PEX26Q7Z412 305 aa26.64■■□□□ 1.86
SPTSSA-201ENST00000298130 FRMD5Q7Z6J6 570 aa26.64■■□□□ 1.86
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms