RNA–Protein interactions for RNA: ENST00000297265.4

CHMP4C-201, Transcript of charged multivesicular body protein 4C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP4C, Length 1,866 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4C-201ENST00000297265 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.02■□□□□ -0
CHMP4C-201ENST00000297265 LUC7L2Q9Y383 392 aaKnown RBP15.02■□□□□ -0
CHMP4C-201ENST00000297265 A0A0G2JLL6 359 aaPredicted RBP15.01□□□□□ -0.01
CHMP4C-201ENST00000297265 TESPA1A2RU30 521 aaPredicted RBP15.01□□□□□ -0.01
CHMP4C-201ENST00000297265 PDXKO00764 312 aa15.01□□□□□ -0.01
CHMP4C-201ENST00000297265 TGFB1I1O43294 461 aa15.01□□□□□ -0.01
CHMP4C-201ENST00000297265 CCP110O43303 1012 aa15.01□□□□□ -0.01
CHMP4C-201ENST00000297265 ZSCAN12O43309 604 aa15.01□□□□□ -0.01
CHMP4C-201ENST00000297265 KIF20AO95235 890 aa15.01□□□□□ -0.01
CHMP4C-201ENST00000297265 GUCY2CP25092 1073 aa15.01□□□□□ -0.01
CHMP4C-201ENST00000297265 NMT1P30419 496 aaKnown RBP15.01□□□□□ -0.01
CHMP4C-201ENST00000297265 EPHX2P34913 555 aa15.01□□□□□ -0.01
CHMP4C-201ENST00000297265 PPATQ06203 517 aa15.01□□□□□ -0.01
CHMP4C-201ENST00000297265 ADAM9Q13443 819 aa15.01□□□□□ -0.01
CHMP4C-201ENST00000297265 MEA1Q16626 185 aa15.01□□□□□ -0.01
CHMP4C-201ENST00000297265 SYT10Q6XYQ8 523 aa15.01□□□□□ -0.01
CHMP4C-201ENST00000297265 PPP4R3CPQ6ZMV5 832 aa15.01□□□□□ -0.01
CHMP4C-201ENST00000297265 ZNF720Q7Z2F6 126 aa15.01□□□□□ -0.01
CHMP4C-201ENST00000297265 PRRT2Q7Z6L0 340 aaPredicted RBP15.01□□□□□ -0.01
CHMP4C-201ENST00000297265 TMTC1Q8IUR5 882 aa15.01□□□□□ -0.01
CHMP4C-201ENST00000297265 NSUN6Q8TEA1 469 aaKnown RBP15.01□□□□□ -0.01
CHMP4C-201ENST00000297265 ZC3H15Q8WU90 426 aaKnown RBP15.01□□□□□ -0.01
CHMP4C-201ENST00000297265 ZNF592Q92610 1267 aa15.01□□□□□ -0.01
CHMP4C-201ENST00000297265 STRA6Q9BX79 667 aa15.01□□□□□ -0.01
CHMP4C-201ENST00000297265 MAF1Q9H063 256 aa15.01□□□□□ -0.01
CHMP4C-201ENST00000297265 ZSWIM4Q9H7M6 989 aa15.01□□□□□ -0.01
CHMP4C-201ENST00000297265 ELP3Q9H9T3 547 aa15.01□□□□□ -0.01
CHMP4C-201ENST00000297265 TELO2Q9Y4R8 837 aa15.01□□□□□ -0.01
CHMP4C-201ENST00000297265 CSADQ9Y600 493 aa15.01□□□□□ -0.01
CHMP4C-201ENST00000297265 MYH11P35749 1972 aa15.01□□□□□ -0.01
CHMP4C-201ENST00000297265 ZMYM2Q9UBW7 1377 aa15.01□□□□□ -0.01
CHMP4C-201ENST00000297265 KIF2AO00139 706 aaPredicted RBP15.01□□□□□ -0.01
CHMP4C-201ENST00000297265 TPM1P09493 284 aa15.01□□□□□ -0.01
CHMP4C-201ENST00000297265 KCNA2P16389 499 aa15.01□□□□□ -0.01
CHMP4C-201ENST00000297265 GAP43P17677 238 aa15.01□□□□□ -0.01
CHMP4C-201ENST00000297265 CCND2P30279 289 aa15.01□□□□□ -0.01
CHMP4C-201ENST00000297265 QARSP47897 775 aaKnown RBP15.01□□□□□ -0.01
CHMP4C-201ENST00000297265 RARRES1P49788 294 aa15.01□□□□□ -0.01
CHMP4C-201ENST00000297265 FSTL1Q12841 308 aa15.01□□□□□ -0.01
CHMP4C-201ENST00000297265 MOGSQ13724 837 aa15.01□□□□□ -0.01
CHMP4C-201ENST00000297265 PLS1Q14651 629 aa15.01□□□□□ -0.01
CHMP4C-201ENST00000297265 ZC2HC1CQ53FD0 456 aaPredicted RBP15.01□□□□□ -0.01
CHMP4C-201ENST00000297265 DPY19L2Q6NUT2 758 aa15.01□□□□□ -0.01
CHMP4C-201ENST00000297265 GPRASP2Q96D09 838 aa15.01□□□□□ -0.01
CHMP4C-201ENST00000297265 NUP58Q9BVL2 599 aa15.01□□□□□ -0.01
CHMP4C-201ENST00000297265 R3HDMLQ9H3Y0 253 aa15.01□□□□□ -0.01
CHMP4C-201ENST00000297265 PARVGQ9HBI0 331 aa15.01□□□□□ -0.01
CHMP4C-201ENST00000297265 DBR1Q9UK59 544 aaKnown RBP15.01□□□□□ -0.01
CHMP4C-201ENST00000297265 ODF2LQ9ULJ1 636 aa15.01□□□□□ -0.01
CHMP4C-201ENST00000297265 DOCK5Q9H7D0 1870 aa15□□□□□ -0.01
CHMP4C-201ENST00000297265 A0A1W2PQJ5 194 aa15□□□□□ -0.01
CHMP4C-201ENST00000297265 MAFGO15525 162 aa15□□□□□ -0.01
CHMP4C-201ENST00000297265 TBCAO75347 108 aaKnown RBP15□□□□□ -0.01
CHMP4C-201ENST00000297265 GCNT3O95395 438 aa15□□□□□ -0.01
CHMP4C-201ENST00000297265 ABL1P00519 1130 aa15□□□□□ -0.01
CHMP4C-201ENST00000297265 TRIM21P19474 475 aaKnown RBP15□□□□□ -0.01
CHMP4C-201ENST00000297265 NR2F2P24468 414 aa15□□□□□ -0.01
CHMP4C-201ENST00000297265 IREB2P48200 963 aaKnown RBP15□□□□□ -0.01
CHMP4C-201ENST00000297265 CYP26C1Q6V0L0 522 aa15□□□□□ -0.01
CHMP4C-201ENST00000297265 MYCT1Q8N699 235 aa15□□□□□ -0.01
CHMP4C-201ENST00000297265 TSC1Q92574 1164 aa15□□□□□ -0.01
CHMP4C-201ENST00000297265 SENP7Q9BQF6 1050 aa15□□□□□ -0.01
CHMP4C-201ENST00000297265 TMEM150BA6NC51 233 aa14.99□□□□□ -0.01
CHMP4C-201ENST00000297265 GLTPD2A6NH11 291 aa14.99□□□□□ -0.01
CHMP4C-201ENST00000297265 SPDYE5A6NIY4 337 aa14.99□□□□□ -0.01
CHMP4C-201ENST00000297265 EIF3DO15371 548 aaKnown RBP eCLIP14.99□□□□□ -0.01
CHMP4C-201ENST00000297265 CTIFO43310 598 aaKnown RBP14.99□□□□□ -0.01
CHMP4C-201ENST00000297265 PPP1R37O75864 691 aa14.99□□□□□ -0.01
CHMP4C-201ENST00000297265 FAM13AO94988 1023 aa14.99□□□□□ -0.01
CHMP4C-201ENST00000297265 GNA14O95837 355 aa14.99□□□□□ -0.01
CHMP4C-201ENST00000297265 TUBB4AP04350 444 aa14.99□□□□□ -0.01
CHMP4C-201ENST00000297265 FKBP15Q5T1M5 1219 aa14.99□□□□□ -0.01
CHMP4C-201ENST00000297265 PADI6Q6TGC4 694 aa14.99□□□□□ -0.01
CHMP4C-201ENST00000297265 ERO1BQ86YB8 467 aa14.99□□□□□ -0.01
CHMP4C-201ENST00000297265 KSR1Q8IVT5 923 aa14.99□□□□□ -0.01
CHMP4C-201ENST00000297265 C4orf19Q8IY42 314 aa14.99□□□□□ -0.01
CHMP4C-201ENST00000297265 ANKRD13AQ8IZ07 590 aa14.99□□□□□ -0.01
CHMP4C-201ENST00000297265 PROCA1Q8NCQ7 364 aaPredicted RBP14.99□□□□□ -0.01
CHMP4C-201ENST00000297265 KIF18AQ8NI77 898 aa14.99□□□□□ -0.01
CHMP4C-201ENST00000297265 OTUD5Q96G74 571 aa14.99□□□□□ -0.01
CHMP4C-201ENST00000297265 SH2D3AQ9BRG2 576 aa14.99□□□□□ -0.01
CHMP4C-201ENST00000297265 TYW1Q9NV66 732 aaKnown RBP14.99□□□□□ -0.01
CHMP4C-201ENST00000297265 KCNH4Q9UQ05 1017 aa14.99□□□□□ -0.01
CHMP4C-201ENST00000297265 REXO2Q9Y3B8 237 aaKnown RBP14.99□□□□□ -0.01
CHMP4C-201ENST00000297265 SAMM50Q9Y512 469 aa14.99□□□□□ -0.01
CHMP4C-201ENST00000297265 HIP1RO75146 1068 aa14.99□□□□□ -0.01
CHMP4C-201ENST00000297265 CNMDO75829 334 aa14.99□□□□□ -0.01
CHMP4C-201ENST00000297265 AKAP3O75969 853 aa14.99□□□□□ -0.01
CHMP4C-201ENST00000297265 STBD1O95210 358 aa14.99□□□□□ -0.01
CHMP4C-201ENST00000297265 CCDC175P0C221 793 aa14.99□□□□□ -0.01
CHMP4C-201ENST00000297265 ZBED6P86452 979 aa14.99□□□□□ -0.01
CHMP4C-201ENST00000297265 CNTN2Q02246 1040 aa14.99□□□□□ -0.01
CHMP4C-201ENST00000297265 ACRBPQ8NEB7 543 aa14.99□□□□□ -0.01
CHMP4C-201ENST00000297265 CHST13Q8NET6 341 aa14.99□□□□□ -0.01
CHMP4C-201ENST00000297265 IRX2Q9BZI1 471 aaPredicted RBP14.99□□□□□ -0.01
CHMP4C-201ENST00000297265 SEL1LQ9UBV2 794 aa14.99□□□□□ -0.01
CHMP4C-201ENST00000297265 ARHGEF35A5YM69 484 aa14.98□□□□□ -0.01
CHMP4C-201ENST00000297265 SPATA31C2B4DYI2 1134 aa14.98□□□□□ -0.01
CHMP4C-201ENST00000297265 CXCL11O14625 94 aa14.98□□□□□ -0.01
CHMP4C-201ENST00000297265 CETN3O15182 167 aa14.98□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms