RNA–Protein interactions for RNA: ENST00000295522.3

CLDN1-201, Transcript of claudin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLDN1, Length 3,481 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN1-201ENST00000295522 EIF3BP55884 814 aaKnown RBP11.05□□□□□ -0.64
CLDN1-201ENST00000295522 FITM2Q8N6M3 262 aa11.05□□□□□ -0.64
CLDN1-201ENST00000295522 DRAXINQ8NBI3 349 aaPredicted RBP11.05□□□□□ -0.64
CLDN1-201ENST00000295522 FBXO25Q8TCJ0 367 aa11.05□□□□□ -0.64
CLDN1-201ENST00000295522 CNKSR1Q969H4 720 aa11.05□□□□□ -0.64
CLDN1-201ENST00000295522 DDX50Q9BQ39 737 aaKnown RBP11.05□□□□□ -0.64
CLDN1-201ENST00000295522 SEMA4AQ9H3S1 761 aa11.05□□□□□ -0.64
CLDN1-201ENST00000295522 SEMA6BQ9H3T3 888 aa11.05□□□□□ -0.64
CLDN1-201ENST00000295522 LMCD1Q9NZU5 365 aa11.05□□□□□ -0.64
CLDN1-201ENST00000295522 TECPR2O15040 1411 aa11.05□□□□□ -0.64
CLDN1-201ENST00000295522 CREB3O43889 395 aa11.04□□□□□ -0.64
CLDN1-201ENST00000295522 CCNT1O60563 726 aaKnown RBP11.04□□□□□ -0.64
CLDN1-201ENST00000295522 PFDN1O60925 122 aa11.04□□□□□ -0.64
CLDN1-201ENST00000295522 ENTPD5O75356 428 aa11.04□□□□□ -0.64
CLDN1-201ENST00000295522 ZCCHC18P0CG32 403 aa11.04□□□□□ -0.64
CLDN1-201ENST00000295522 CDK17Q00537 523 aa11.04□□□□□ -0.64
CLDN1-201ENST00000295522 AMPD3Q01432 767 aa11.04□□□□□ -0.64
CLDN1-201ENST00000295522 ADAM9Q13443 819 aa11.04□□□□□ -0.64
CLDN1-201ENST00000295522 TXNRD1Q16881 649 aa11.04□□□□□ -0.64
CLDN1-201ENST00000295522 APBB1IPQ7Z5R6 666 aaPredicted RBP11.04□□□□□ -0.64
CLDN1-201ENST00000295522 KIAA0825Q8IV33 1275 aa11.04□□□□□ -0.64
CLDN1-201ENST00000295522 KLHL23Q8NBE8 558 aa11.04□□□□□ -0.64
CLDN1-201ENST00000295522 ERP27Q96DN0 273 aa11.04□□□□□ -0.64
CLDN1-201ENST00000295522 CALML4Q96GE6 196 aa11.04□□□□□ -0.64
CLDN1-201ENST00000295522 ZSCAN10Q96SZ4 725 aaPredicted RBP11.04□□□□□ -0.64
CLDN1-201ENST00000295522 TRIM9Q9C026 710 aa11.04□□□□□ -0.64
CLDN1-201ENST00000295522 KLRC4O43908 158 aa11.04□□□□□ -0.64
CLDN1-201ENST00000295522 FLOT1O75955 427 aa11.04□□□□□ -0.64
CLDN1-201ENST00000295522 RGPD1P0DJD0 1748 aa11.04□□□□□ -0.64
CLDN1-201ENST00000295522 KCNA3P22001 575 aa11.04□□□□□ -0.64
CLDN1-201ENST00000295522 CACNB1Q02641 598 aaPredicted RBP11.04□□□□□ -0.64
CLDN1-201ENST00000295522 BLIDQ8IZY5 108 aa11.04□□□□□ -0.64
CLDN1-201ENST00000295522 FAM81AQ8TBF8 368 aa11.04□□□□□ -0.64
CLDN1-201ENST00000295522 U2AF1L4Q8WU68 220 aaKnown RBP11.04□□□□□ -0.64
CLDN1-201ENST00000295522 FAM210AQ96ND0 272 aa11.04□□□□□ -0.64
CLDN1-201ENST00000295522 TGS1Q96RS0 853 aaKnown RBP11.04□□□□□ -0.64
CLDN1-201ENST00000295522 SIPA1L2Q9P2F8 1722 aaPredicted RBP11.04□□□□□ -0.64
CLDN1-201ENST00000295522 SIK3Q9Y2K2 1263 aa11.04□□□□□ -0.64
CLDN1-201ENST00000295522 ATP6V0A2Q9Y487 856 aa11.04□□□□□ -0.64
CLDN1-201ENST00000295522 UTP18Q9Y5J1 556 aaKnown RBP eCLIP11.04□□□□□ -0.64
CLDN1-201ENST00000295522 ABCC12Q96J65 1359 aa11.04□□□□□ -0.64
CLDN1-201ENST00000295522 TMEM120BA0PK00 339 aa11.04□□□□□ -0.64
CLDN1-201ENST00000295522 PRPF3O43395 683 aaKnown RBP11.04□□□□□ -0.64
CLDN1-201ENST00000295522 PAEPP09466 180 aa11.04□□□□□ -0.64
CLDN1-201ENST00000295522 ACTN1P12814 892 aa11.04□□□□□ -0.64
CLDN1-201ENST00000295522 CREB1P16220 341 aa11.04□□□□□ -0.64
CLDN1-201ENST00000295522 SLC18A3Q16572 532 aa11.04□□□□□ -0.64
CLDN1-201ENST00000295522 DCAF17Q5H9S7 520 aaPredicted RBP11.04□□□□□ -0.64
CLDN1-201ENST00000295522 UBAP2Q5T6F2 1119 aaKnown RBP11.04□□□□□ -0.64
CLDN1-201ENST00000295522 TEX9Q8N6V9 391 aa11.04□□□□□ -0.64
CLDN1-201ENST00000295522 TTC8Q8TAM2 541 aa11.04□□□□□ -0.64
CLDN1-201ENST00000295522 DYDC2Q96IM9 177 aa11.04□□□□□ -0.64
CLDN1-201ENST00000295522 RMDN2Q96LZ7 410 aa11.04□□□□□ -0.64
CLDN1-201ENST00000295522 VAT1LQ9HCJ6 419 aa11.04□□□□□ -0.64
CLDN1-201ENST00000295522 A0A1W2PRG0 241 aa11.03□□□□□ -0.64
CLDN1-201ENST00000295522 CIAO1O76071 339 aa11.03□□□□□ -0.64
CLDN1-201ENST00000295522 ETS2P15036 469 aa11.03□□□□□ -0.64
CLDN1-201ENST00000295522 KCNMA1Q12791 1236 aa11.03□□□□□ -0.64
CLDN1-201ENST00000295522 GALNT15Q8N3T1 639 aa11.03□□□□□ -0.64
CLDN1-201ENST00000295522 GBP7Q8N8V2 638 aaPredicted RBP11.03□□□□□ -0.64
CLDN1-201ENST00000295522 SPATA5Q8NB90 893 aa11.03□□□□□ -0.64
CLDN1-201ENST00000295522 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.03□□□□□ -0.64
CLDN1-201ENST00000295522 MAIP1Q8WWC4 291 aa11.03□□□□□ -0.64
CLDN1-201ENST00000295522 SPIRE2Q8WWL2 714 aa11.03□□□□□ -0.64
CLDN1-201ENST00000295522 PBKQ96KB5 322 aa11.03□□□□□ -0.64
CLDN1-201ENST00000295522 ADAM33Q9BZ11 813 aa11.03□□□□□ -0.64
CLDN1-201ENST00000295522 UBA5Q9GZZ9 404 aa11.03□□□□□ -0.64
CLDN1-201ENST00000295522 GREM2Q9H772 168 aa11.03□□□□□ -0.64
CLDN1-201ENST00000295522 MTRF1LQ9UGC7 380 aaKnown RBP11.03□□□□□ -0.64
CLDN1-201ENST00000295522 ARL2BPQ9Y2Y0 163 aa11.03□□□□□ -0.64
CLDN1-201ENST00000295522 NR2E1Q9Y466 385 aa11.03□□□□□ -0.64
CLDN1-201ENST00000295522 UBR1Q8IWV7 1749 aa11.03□□□□□ -0.64
CLDN1-201ENST00000295522 A6NHS1 94 aa11.03□□□□□ -0.64
CLDN1-201ENST00000295522 PLCG2P16885 1265 aa11.03□□□□□ -0.64
CLDN1-201ENST00000295522 VPS41P49754 854 aa11.03□□□□□ -0.64
CLDN1-201ENST00000295522 ALKBH5Q6P6C2 394 aaKnown RBP11.03□□□□□ -0.64
CLDN1-201ENST00000295522 MIGA2Q7L4E1 593 aa11.03□□□□□ -0.64
CLDN1-201ENST00000295522 PIGWQ7Z7B1 504 aa11.03□□□□□ -0.64
CLDN1-201ENST00000295522 SRBD1Q8N5C6 995 aaKnown RBP11.03□□□□□ -0.64
CLDN1-201ENST00000295522 GLIS3Q8NEA6 775 aa11.03□□□□□ -0.64
CLDN1-201ENST00000295522 PIGOQ8TEQ8 1089 aa11.03□□□□□ -0.64
CLDN1-201ENST00000295522 ATXN2LQ8WWM7 1075 aaKnown RBP11.03□□□□□ -0.64
CLDN1-201ENST00000295522 BAP1Q92560 729 aa11.03□□□□□ -0.64
CLDN1-201ENST00000295522 BORCS6Q96GS4 357 aa11.03□□□□□ -0.64
CLDN1-201ENST00000295522 BSDC1Q9NW68 430 aaPredicted RBP11.03□□□□□ -0.64
CLDN1-201ENST00000295522 PJA2O43164 708 aa11.03□□□□□ -0.64
CLDN1-201ENST00000295522 KRT18P05783 430 aaKnown RBP11.03□□□□□ -0.64
CLDN1-201ENST00000295522 PHKG2P15735 406 aa11.03□□□□□ -0.64
CLDN1-201ENST00000295522 PTDSS1P48651 473 aaKnown RBP11.03□□□□□ -0.64
CLDN1-201ENST00000295522 DEUP1Q05D60 604 aa11.03□□□□□ -0.64
CLDN1-201ENST00000295522 DBN1Q16643 649 aa11.03□□□□□ -0.64
CLDN1-201ENST00000295522 SV2BQ7L1I2 683 aa11.03□□□□□ -0.64
CLDN1-201ENST00000295522 CCNJLQ8IV13 435 aa11.03□□□□□ -0.64
CLDN1-201ENST00000295522 C1orf131Q8NDD1 294 aaKnown RBP11.03□□□□□ -0.64
CLDN1-201ENST00000295522 ABTB1Q969K4 478 aaPredicted RBP11.03□□□□□ -0.64
CLDN1-201ENST00000295522 STMN4Q9H169 189 aaPredicted RBP11.03□□□□□ -0.64
CLDN1-201ENST00000295522 GSTTP1A0A1W2PQM5 241 aa11.02□□□□□ -0.65
CLDN1-201ENST00000295522 NBPF26B4DH59 902 aa11.02□□□□□ -0.65
CLDN1-201ENST00000295522 ECEL1O95672 775 aa11.02□□□□□ -0.65
CLDN1-201ENST00000295522 GH1P01241 217 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms