RNA–Protein interactions for RNA: ENST00000294008.3

SLX4-201, Transcript of SLX4 structure-specific endonuclease subunit, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SLX4, Length 7,307 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLX4-201ENST00000294008 WDR47O94967 919 aa13.33□□□□□ -0.28
SLX4-201ENST00000294008 HMBSP08397 361 aa13.33□□□□□ -0.28
SLX4-201ENST00000294008 TNNI3KQ59H18 835 aa13.33□□□□□ -0.28
SLX4-201ENST00000294008 PDXDC2PQ6P474 469 aa13.33□□□□□ -0.28
SLX4-201ENST00000294008 VPS39Q96JC1 886 aa13.33□□□□□ -0.28
SLX4-201ENST00000294008 JPH2Q9BR39 696 aaPredicted RBP13.33□□□□□ -0.28
SLX4-201ENST00000294008 INTS9Q9NV88 658 aaKnown RBP13.33□□□□□ -0.28
SLX4-201ENST00000294008 AKT1P31749 480 aa13.33□□□□□ -0.28
SLX4-201ENST00000294008 GPR1P46091 355 aa13.33□□□□□ -0.28
SLX4-201ENST00000294008 CEP78Q5JTW2 689 aa13.33□□□□□ -0.28
SLX4-201ENST00000294008 FAM182BQ5T319 152 aa13.33□□□□□ -0.28
SLX4-201ENST00000294008 SIK2Q9H0K1 926 aa13.33□□□□□ -0.28
SLX4-201ENST00000294008 UBE2TQ9NPD8 197 aaPredicted RBP13.33□□□□□ -0.28
SLX4-201ENST00000294008 DTNAQ9Y4J8 743 aa13.33□□□□□ -0.28
SLX4-201ENST00000294008 GOLGA8MH3BSY2 632 aa13.32□□□□□ -0.28
SLX4-201ENST00000294008 HOXD10P28358 340 aa13.32□□□□□ -0.28
SLX4-201ENST00000294008 COBLL1Q53SF7 1204 aa13.32□□□□□ -0.28
SLX4-201ENST00000294008 SH3BP5LQ7L8J4 393 aa13.32□□□□□ -0.28
SLX4-201ENST00000294008 CCNYL1Q8N7R7 359 aa13.32□□□□□ -0.28
SLX4-201ENST00000294008 EIF4E1BA6NMX2 242 aaKnown RBP13.32□□□□□ -0.28
SLX4-201ENST00000294008 TOMM20Q15388 145 aa13.32□□□□□ -0.28
SLX4-201ENST00000294008 FRMD6Q96NE9 622 aa13.32□□□□□ -0.28
SLX4-201ENST00000294008 HEY1Q9Y5J3 304 aa13.32□□□□□ -0.28
SLX4-201ENST00000294008 SEC24DO94855 1032 aaPredicted RBP13.32□□□□□ -0.28
SLX4-201ENST00000294008 NEK2P51955 445 aa13.32□□□□□ -0.28
SLX4-201ENST00000294008 LEMD2Q8NC56 503 aa13.32□□□□□ -0.28
SLX4-201ENST00000294008 LINS1Q8NG48 757 aa13.32□□□□□ -0.28
SLX4-201ENST00000294008 SERPINI1Q99574 410 aa13.32□□□□□ -0.28
SLX4-201ENST00000294008 PARVBQ9HBI1 364 aa13.32□□□□□ -0.28
SLX4-201ENST00000294008 KIAA1468Q9P260 1216 aa13.32□□□□□ -0.28
SLX4-201ENST00000294008 DBNLQ9UJU6 430 aaKnown RBP13.32□□□□□ -0.28
SLX4-201ENST00000294008 SLFN14P0C7P3 912 aa13.32□□□□□ -0.28
SLX4-201ENST00000294008 ERFEQ4G0M1 354 aa13.32□□□□□ -0.28
SLX4-201ENST00000294008 SRRM1Q8IYB3 904 aaKnown RBP13.32□□□□□ -0.28
SLX4-201ENST00000294008 LPIN2Q92539 896 aa13.32□□□□□ -0.28
SLX4-201ENST00000294008 KDM4CQ9H3R0 1056 aa13.32□□□□□ -0.28
SLX4-201ENST00000294008 H2AFY2Q9P0M6 372 aaPredicted RBP13.32□□□□□ -0.28
SLX4-201ENST00000294008 SOAT1P35610 550 aa13.32□□□□□ -0.28
SLX4-201ENST00000294008 GUCA1AP43080 201 aaPredicted RBP13.32□□□□□ -0.28
SLX4-201ENST00000294008 THNSL1Q8IYQ7 743 aa13.32□□□□□ -0.28
SLX4-201ENST00000294008 MTBPQ96DY7 904 aa13.32□□□□□ -0.28
SLX4-201ENST00000294008 ATXN7L3BQ96GX2 97 aa13.32□□□□□ -0.28
SLX4-201ENST00000294008 ARHGEF3Q9NR81 526 aa13.32□□□□□ -0.28
SLX4-201ENST00000294008 SRGAP2O75044 1071 aa13.32□□□□□ -0.28
SLX4-201ENST00000294008 KRT4P19013 534 aa13.32□□□□□ -0.28
SLX4-201ENST00000294008 SLC27A3Q5K4L6 730 aa13.32□□□□□ -0.28
SLX4-201ENST00000294008 CERS3Q8IU89 383 aa13.32□□□□□ -0.28
SLX4-201ENST00000294008 EXD1Q8NHP7 514 aa13.32□□□□□ -0.28
SLX4-201ENST00000294008 TCP11Q8WWU5 503 aa13.32□□□□□ -0.28
SLX4-201ENST00000294008 KLRF2D3W0D1 207 aa13.31□□□□□ -0.28
SLX4-201ENST00000294008 SUN1O94901 812 aa13.31□□□□□ -0.28
SLX4-201ENST00000294008 SLC8A1P32418 973 aa13.31□□□□□ -0.28
SLX4-201ENST00000294008 PRR23CQ6ZRP0 262 aa13.31□□□□□ -0.28
SLX4-201ENST00000294008 HDDC2Q7Z4H3 204 aa13.31□□□□□ -0.28
SLX4-201ENST00000294008 MLKLQ8NB16 471 aa13.31□□□□□ -0.28
SLX4-201ENST00000294008 ERO1AQ96HE7 468 aa13.31□□□□□ -0.28
SLX4-201ENST00000294008 HES6Q96HZ4 224 aa13.31□□□□□ -0.28
SLX4-201ENST00000294008 EIF3CQ99613 913 aaKnown RBP13.31□□□□□ -0.28
SLX4-201ENST00000294008 SPZ1Q9BXG8 430 aa13.31□□□□□ -0.28
SLX4-201ENST00000294008 EYA2O00167 538 aa13.31□□□□□ -0.28
SLX4-201ENST00000294008 LRRC41Q15345 812 aa13.31□□□□□ -0.28
SLX4-201ENST00000294008 SNCBQ16143 134 aa13.31□□□□□ -0.28
SLX4-201ENST00000294008 BLIDQ8IZY5 108 aa13.31□□□□□ -0.28
SLX4-201ENST00000294008 APPBP2Q92624 585 aa13.31□□□□□ -0.28
SLX4-201ENST00000294008 DYDC2Q96IM9 177 aa13.31□□□□□ -0.28
SLX4-201ENST00000294008 FAM227BQ96M60 508 aa13.31□□□□□ -0.28
SLX4-201ENST00000294008 UTP6Q9NYH9 597 aaKnown RBP13.31□□□□□ -0.28
SLX4-201ENST00000294008 ATP8A1Q9Y2Q0 1164 aa13.31□□□□□ -0.28
SLX4-201ENST00000294008 N6AMT1Q9Y5N5 214 aa13.31□□□□□ -0.28
SLX4-201ENST00000294008 TEX28O15482 410 aa13.31□□□□□ -0.28
SLX4-201ENST00000294008 ALDH1A1P00352 501 aa13.31□□□□□ -0.28
SLX4-201ENST00000294008 PSMA2P25787 234 aa13.31□□□□□ -0.28
SLX4-201ENST00000294008 NR5A1Q13285 461 aa13.31□□□□□ -0.28
SLX4-201ENST00000294008 KRT40Q6A162 431 aa13.31□□□□□ -0.28
SLX4-201ENST00000294008 SPATS2Q86XZ4 545 aaKnown RBP13.31□□□□□ -0.28
SLX4-201ENST00000294008 VPS11Q9H270 941 aa13.31□□□□□ -0.28
SLX4-201ENST00000294008 QTRT2Q9H974 415 aaKnown RBP13.31□□□□□ -0.28
SLX4-201ENST00000294008 ADA2Q9NZK5 511 aa13.31□□□□□ -0.28
SLX4-201ENST00000294008 LZTS1Q9Y250 596 aa13.31□□□□□ -0.28
SLX4-201ENST00000294008 TTC41PQ6P2S7 1318 aa13.31□□□□□ -0.28
SLX4-201ENST00000294008 PLTPP55058 493 aa13.31□□□□□ -0.28
SLX4-201ENST00000294008 AP1B1Q10567 949 aa13.31□□□□□ -0.28
SLX4-201ENST00000294008 VEPH1Q14D04 833 aa13.31□□□□□ -0.28
SLX4-201ENST00000294008 IRAK1BP1Q5VVH5 260 aa13.31□□□□□ -0.28
SLX4-201ENST00000294008 ZNF304Q9HCX3 659 aa13.31□□□□□ -0.28
SLX4-201ENST00000294008 ARPP21Q9UBL0 812 aaPredicted RBP13.31□□□□□ -0.28
SLX4-201ENST00000294008 PRG3Q9Y2Y8 225 aaPredicted RBP13.31□□□□□ -0.28
SLX4-201ENST00000294008 KIF28PB7ZC32 967 aa13.31□□□□□ -0.28
SLX4-201ENST00000294008 RNMTO43148 476 aaKnown RBP13.31□□□□□ -0.28
SLX4-201ENST00000294008 ALDH1A2O94788 518 aa13.31□□□□□ -0.28
SLX4-201ENST00000294008 FYNP06241 537 aa13.31□□□□□ -0.28
SLX4-201ENST00000294008 RASSF3Q86WH2 238 aa13.31□□□□□ -0.28
SLX4-201ENST00000294008 ZNF614Q8N883 585 aa13.31□□□□□ -0.28
SLX4-201ENST00000294008 MEFVO15553 781 aaPredicted RBP13.31□□□□□ -0.28
SLX4-201ENST00000294008 SSTR3P32745 418 aaPredicted RBP13.31□□□□□ -0.28
SLX4-201ENST00000294008 USP14P54578 494 aa13.31□□□□□ -0.28
SLX4-201ENST00000294008 PASD1Q8IV76 773 aa13.31□□□□□ -0.28
SLX4-201ENST00000294008 SREK1IP1Q8N9Q2 155 aaPredicted RBP13.31□□□□□ -0.28
SLX4-201ENST00000294008 EXOC4Q96A65 974 aa13.31□□□□□ -0.28
SLX4-201ENST00000294008 TTC17Q96AE7 1141 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms