RNA–Protein interactions for RNA: ENST00000284771.6

PDLIM3-203, Transcript of PDZ and LIM domain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM3, Length 1,672 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-203ENST00000284771 PAK6Q9NQU5 681 aaPredicted RBP24.39■■□□□ 1.49
PDLIM3-203ENST00000284771 PTMSP20962 102 aa24.38■■□□□ 1.49
PDLIM3-203ENST00000284771 CPT1AP50416 773 aa24.38■■□□□ 1.49
PDLIM3-203ENST00000284771 ANO5Q75V66 913 aa24.38■■□□□ 1.49
PDLIM3-203ENST00000284771 PLPPR4Q7Z2D5 763 aa24.38■■□□□ 1.49
PDLIM3-203ENST00000284771 KLHDC9Q8NEP7 349 aa24.38■■□□□ 1.49
PDLIM3-203ENST00000284771 GLG1Q92896 1179 aa24.38■■□□□ 1.49
PDLIM3-203ENST00000284771 ATP6V0A1Q93050 837 aa24.38■■□□□ 1.49
PDLIM3-203ENST00000284771 ZNF333Q96JL9 665 aa24.38■■□□□ 1.49
PDLIM3-203ENST00000284771 SH2D3AQ9BRG2 576 aa24.38■■□□□ 1.49
PDLIM3-203ENST00000284771 TRAK2O60296 914 aa24.37■■□□□ 1.49
PDLIM3-203ENST00000284771 SLFN14P0C7P3 912 aa24.37■■□□□ 1.49
PDLIM3-203ENST00000284771 CCL5P13501 91 aa24.37■■□□□ 1.49
PDLIM3-203ENST00000284771 YWHABP31946 246 aaKnown RBP24.37■■□□□ 1.49
PDLIM3-203ENST00000284771 PRKCEQ02156 737 aa24.37■■□□□ 1.49
PDLIM3-203ENST00000284771 KLHL40Q2TBA0 621 aa24.37■■□□□ 1.49
PDLIM3-203ENST00000284771 GNASQ5JWF2 1037 aa24.37■■□□□ 1.49
PDLIM3-203ENST00000284771 CCSAPQ6IQ19 270 aaPredicted RBP24.37■■□□□ 1.49
PDLIM3-203ENST00000284771 RAD54LQ92698 747 aa24.37■■□□□ 1.49
PDLIM3-203ENST00000284771 STAMQ92783 540 aa24.37■■□□□ 1.49
PDLIM3-203ENST00000284771 KAT2BQ92831 832 aa24.37■■□□□ 1.49
PDLIM3-203ENST00000284771 NACC1Q96RE7 527 aa24.37■■□□□ 1.49
PDLIM3-203ENST00000284771 RNPEPQ9H4A4 650 aa24.37■■□□□ 1.49
PDLIM3-203ENST00000284771 AZI2Q9H6S1 392 aa24.37■■□□□ 1.49
PDLIM3-203ENST00000284771 MSCO60682 206 aa24.37■■□□□ 1.49
PDLIM3-203ENST00000284771 MARK3P27448 753 aa24.37■■□□□ 1.49
PDLIM3-203ENST00000284771 MCM6Q14566 821 aa24.37■■□□□ 1.49
PDLIM3-203ENST00000284771 FAM160B1Q5W0V3 765 aa24.37■■□□□ 1.49
PDLIM3-203ENST00000284771 GRAMD1CQ8IYS0 662 aa24.37■■□□□ 1.49
PDLIM3-203ENST00000284771 SMARCAD1Q9H4L7 1026 aa24.37■■□□□ 1.49
PDLIM3-203ENST00000284771 DNM3Q9UQ16 869 aa24.37■■□□□ 1.49
PDLIM3-203ENST00000284771 FRMPD3Q5JV73 1810 aa24.36■■□□□ 1.49
PDLIM3-203ENST00000284771 KCTD17Q8N5Z5 321 aa24.36■■□□□ 1.49
PDLIM3-203ENST00000284771 LARP4BQ92615 738 aaKnown RBP24.36■■□□□ 1.49
PDLIM3-203ENST00000284771 ARMC5Q96C12 935 aa24.36■■□□□ 1.49
PDLIM3-203ENST00000284771 TIGD1Q96MW7 591 aa24.36■■□□□ 1.49
PDLIM3-203ENST00000284771 RNF208Q9H0X6 261 aa24.36■■□□□ 1.49
PDLIM3-203ENST00000284771 BHMT2Q9H2M3 363 aa24.36■■□□□ 1.49
PDLIM3-203ENST00000284771 KBTBD4Q9NVX7 518 aa24.36■■□□□ 1.49
PDLIM3-203ENST00000284771 STK17AQ9UEE5 414 aa24.36■■□□□ 1.49
PDLIM3-203ENST00000284771 H3BRB1 525 aa24.35■■□□□ 1.49
PDLIM3-203ENST00000284771 PURAQ00577 322 aaKnown RBP24.35■■□□□ 1.49
PDLIM3-203ENST00000284771 MDM2Q00987 491 aaPredicted RBP24.35■■□□□ 1.49
PDLIM3-203ENST00000284771 DHX8Q14562 1220 aaKnown RBP24.35■■□□□ 1.49
PDLIM3-203ENST00000284771 PLCB4Q15147 1175 aa24.35■■□□□ 1.49
PDLIM3-203ENST00000284771 SH3RF1Q7Z6J0 888 aa24.35■■□□□ 1.49
PDLIM3-203ENST00000284771 CNNM3Q8NE01 707 aa24.35■■□□□ 1.49
PDLIM3-203ENST00000284771 PAGE5Q96GU1 130 aa24.35■■□□□ 1.49
PDLIM3-203ENST00000284771 PYM1Q9BRP8 204 aaKnown RBP24.35■■□□□ 1.49
PDLIM3-203ENST00000284771 TUT1Q9H6E5 874 aaKnown RBP24.35■■□□□ 1.49
PDLIM3-203ENST00000284771 TMEM63CQ9P1W3 806 aa24.35■■□□□ 1.49
PDLIM3-203ENST00000284771 DNAH12Q6ZR08 3092 aa24.35■■□□□ 1.49
PDLIM3-203ENST00000284771 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP24.34■■□□□ 1.49
PDLIM3-203ENST00000284771 KINO60870 393 aaKnown RBP24.34■■□□□ 1.49
PDLIM3-203ENST00000284771 EYA4O95677 639 aa24.34■■□□□ 1.49
PDLIM3-203ENST00000284771 OATP04181 439 aa24.34■■□□□ 1.49
PDLIM3-203ENST00000284771 PLA2G4BP0C869 781 aa24.34■■□□□ 1.49
PDLIM3-203ENST00000284771 XRCC6P12956 609 aaKnown RBP eCLIP24.34■■□□□ 1.49
PDLIM3-203ENST00000284771 CST5P28325 142 aaPredicted RBP24.34■■□□□ 1.49
PDLIM3-203ENST00000284771 RARRES1P49788 294 aa24.34■■□□□ 1.49
PDLIM3-203ENST00000284771 SLC12A3P55017 1021 aa24.34■■□□□ 1.49
PDLIM3-203ENST00000284771 NPEPPSP55786 919 aa24.34■■□□□ 1.49
PDLIM3-203ENST00000284771 CAMK4Q16566 473 aa24.34■■□□□ 1.49
PDLIM3-203ENST00000284771 PLA2G4FQ68DD2 849 aa24.34■■□□□ 1.49
PDLIM3-203ENST00000284771 DEFB118Q96PH6 123 aa24.34■■□□□ 1.49
PDLIM3-203ENST00000284771 SPC25Q9HBM1 224 aa24.34■■□□□ 1.49
PDLIM3-203ENST00000284771 ERAP1Q9NZ08 941 aa24.34■■□□□ 1.49
PDLIM3-203ENST00000284771 F2P00734 622 aa24.34■■□□□ 1.49
PDLIM3-203ENST00000284771 MYL3P08590 195 aa24.34■■□□□ 1.49
PDLIM3-203ENST00000284771 CASP1P29466 404 aa24.34■■□□□ 1.49
PDLIM3-203ENST00000284771 AFMP43652 599 aa24.34■■□□□ 1.49
PDLIM3-203ENST00000284771 LRRC41Q15345 812 aa24.34■■□□□ 1.49
PDLIM3-203ENST00000284771 KCNA10Q16322 511 aa24.34■■□□□ 1.49
PDLIM3-203ENST00000284771 XKR3Q5GH77 459 aa24.34■■□□□ 1.49
PDLIM3-203ENST00000284771 CKAP2LQ8IYA6 745 aa24.34■■□□□ 1.49
PDLIM3-203ENST00000284771 SYT2Q8N9I0 419 aaPredicted RBP24.34■■□□□ 1.49
PDLIM3-203ENST00000284771 CUEDC2Q9H467 287 aa24.34■■□□□ 1.49
PDLIM3-203ENST00000284771 USP25Q9UHP3 1055 aa24.34■■□□□ 1.49
PDLIM3-203ENST00000284771 DKC1O60832 514 aaKnown RBP eCLIP24.33■■□□□ 1.49
PDLIM3-203ENST00000284771 MYCNP04198 464 aaPredicted RBP24.33■■□□□ 1.49
PDLIM3-203ENST00000284771 SLC26A2P50443 739 aa24.33■■□□□ 1.49
PDLIM3-203ENST00000284771 BRDTQ58F21 947 aaPredicted RBP24.33■■□□□ 1.49
PDLIM3-203ENST00000284771 CXCL17Q6UXB2 119 aa24.33■■□□□ 1.49
PDLIM3-203ENST00000284771 CEP57L1Q8IYX8 460 aa24.33■■□□□ 1.49
PDLIM3-203ENST00000284771 ERCC4Q92889 916 aaPredicted RBP24.33■■□□□ 1.49
PDLIM3-203ENST00000284771 CEP89Q96ST8 783 aa24.33■■□□□ 1.49
PDLIM3-203ENST00000284771 DBR1Q9UK59 544 aaKnown RBP24.33■■□□□ 1.49
PDLIM3-203ENST00000284771 ASGR1P07306 291 aa24.32■■□□□ 1.48
PDLIM3-203ENST00000284771 SKOR2Q2VWA4 1001 aaPredicted RBP24.32■■□□□ 1.48
PDLIM3-203ENST00000284771 ARSHQ5FYA8 562 aa24.32■■□□□ 1.48
PDLIM3-203ENST00000284771 ATP8B4Q8TF62 1192 aa24.32■■□□□ 1.48
PDLIM3-203ENST00000284771 PPP1R13LQ8WUF5 828 aa24.32■■□□□ 1.48
PDLIM3-203ENST00000284771 NIFKQ9BYG3 293 aaKnown RBP24.32■■□□□ 1.48
PDLIM3-203ENST00000284771 MCOLN1Q9GZU1 580 aa24.32■■□□□ 1.48
PDLIM3-203ENST00000284771 ANKEF1Q9NU02 776 aa24.32■■□□□ 1.48
PDLIM3-203ENST00000284771 ZBTB42B2RXF5 422 aa24.31■■□□□ 1.48
PDLIM3-203ENST00000284771 HAS3O00219 553 aa24.31■■□□□ 1.48
PDLIM3-203ENST00000284771 PRR29P0C7W0 189 aa24.31■■□□□ 1.48
PDLIM3-203ENST00000284771 CAVIN1Q6NZI2 390 aaKnown RBP24.31■■□□□ 1.48
PDLIM3-203ENST00000284771 SV2BQ7L1I2 683 aa24.31■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms