RNA–Protein interactions for RNA: ENST00000275233.11

SHPRH-201, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SHPRH, Length 6,649 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-201ENST00000275233 MRFAP1L1Q96HT8 127 aa12.8□□□□□ -0.36
SHPRH-201ENST00000275233 TTC1Q99614 292 aa12.8□□□□□ -0.36
SHPRH-201ENST00000275233 EIF3CLB5ME19 914 aaKnown RBP12.8□□□□□ -0.36
SHPRH-201ENST00000275233 USP17L15C9J2P7 530 aa12.8□□□□□ -0.36
SHPRH-201ENST00000275233 USP17L13C9JLJ4 530 aa12.8□□□□□ -0.36
SHPRH-201ENST00000275233 USP17L11C9JVI0 530 aa12.8□□□□□ -0.36
SHPRH-201ENST00000275233 USP17L18D6R9N7 530 aa12.8□□□□□ -0.36
SHPRH-201ENST00000275233 USP17L22D6RA61 530 aa12.8□□□□□ -0.36
SHPRH-201ENST00000275233 USP17L17D6RBQ6 530 aa12.8□□□□□ -0.36
SHPRH-201ENST00000275233 USP17L19D6RCP7 530 aa12.8□□□□□ -0.36
SHPRH-201ENST00000275233 USP17L20D6RJB6 530 aa12.8□□□□□ -0.36
SHPRH-201ENST00000275233 USP17L24Q0WX57 530 aa12.8□□□□□ -0.36
SHPRH-201ENST00000275233 PHLDB3Q6NSJ2 640 aa12.8□□□□□ -0.36
SHPRH-201ENST00000275233 C1orf228Q6PIY5 440 aa12.8□□□□□ -0.36
SHPRH-201ENST00000275233 USP17L6PQ6QN14 398 aa12.8□□□□□ -0.36
SHPRH-201ENST00000275233 ARMCX2Q7L311 632 aa12.8□□□□□ -0.36
SHPRH-201ENST00000275233 RUNDC3BQ96NL0 473 aa12.8□□□□□ -0.36
SHPRH-201ENST00000275233 EIF3CQ99613 913 aaKnown RBP12.8□□□□□ -0.36
SHPRH-201ENST00000275233 GINM1Q9NU53 330 aa12.8□□□□□ -0.36
SHPRH-201ENST00000275233 PLEKHG1Q9ULL1 1385 aa12.8□□□□□ -0.36
SHPRH-201ENST00000275233 ZBBXA8MT70 800 aa12.79□□□□□ -0.36
SHPRH-201ENST00000275233 HIP1RO75146 1068 aa12.79□□□□□ -0.36
SHPRH-201ENST00000275233 SMAP1Q8IYB5 467 aaPredicted RBP12.79□□□□□ -0.36
SHPRH-201ENST00000275233 SCYL3Q8IZE3 742 aa12.79□□□□□ -0.36
SHPRH-201ENST00000275233 SLC8A2Q9UPR5 921 aa12.79□□□□□ -0.36
SHPRH-201ENST00000275233 KDM5DQ9BY66 1539 aa12.79□□□□□ -0.36
SHPRH-201ENST00000275233 USP6P35125 1406 aa12.79□□□□□ -0.36
SHPRH-201ENST00000275233 YWHAHQ04917 246 aaPredicted RBP12.79□□□□□ -0.36
SHPRH-201ENST00000275233 SLMAPQ14BN4 828 aa12.79□□□□□ -0.36
SHPRH-201ENST00000275233 RHPN2Q8IUC4 686 aa12.79□□□□□ -0.36
SHPRH-201ENST00000275233 TBRG4Q969Z0 631 aaKnown RBP eCLIP12.79□□□□□ -0.36
SHPRH-201ENST00000275233 THOC1Q96FV9 657 aaKnown RBP12.79□□□□□ -0.36
SHPRH-201ENST00000275233 CFAP74Q9C0B2 1584 aa12.79□□□□□ -0.36
SHPRH-201ENST00000275233 ERBB3P21860 1342 aa12.79□□□□□ -0.36
SHPRH-201ENST00000275233 SERPING1P05155 500 aa12.79□□□□□ -0.36
SHPRH-201ENST00000275233 SLFN14P0C7P3 912 aa12.79□□□□□ -0.36
SHPRH-201ENST00000275233 INPP1P49441 399 aa12.79□□□□□ -0.36
SHPRH-201ENST00000275233 SEPT2Q15019 361 aa12.79□□□□□ -0.36
SHPRH-201ENST00000275233 TMEM179Q6ZVK1 233 aa12.79□□□□□ -0.36
SHPRH-201ENST00000275233 TMTC3Q6ZXV5 915 aa12.79□□□□□ -0.36
SHPRH-201ENST00000275233 NUDCD1Q96RS6 583 aa12.79□□□□□ -0.36
SHPRH-201ENST00000275233 RNF181Q9P0P0 153 aa12.79□□□□□ -0.36
SHPRH-201ENST00000275233 INTUQ9ULD6 942 aa12.79□□□□□ -0.36
SHPRH-201ENST00000275233 KIF1BO60333 1816 aa12.79□□□□□ -0.36
SHPRH-201ENST00000275233 ZBED1O96006 694 aa12.79□□□□□ -0.36
SHPRH-201ENST00000275233 CDR2Q01850 454 aa12.79□□□□□ -0.36
SHPRH-201ENST00000275233 ANO4Q32M45 955 aa12.79□□□□□ -0.36
SHPRH-201ENST00000275233 FAM133BQ5BKY9 247 aaKnown RBP12.79□□□□□ -0.36
SHPRH-201ENST00000275233 OTUD5Q96G74 571 aa12.79□□□□□ -0.36
SHPRH-201ENST00000275233 HAUS8Q9BT25 410 aa12.79□□□□□ -0.36
SHPRH-201ENST00000275233 SRPRBQ9Y5M8 271 aaKnown RBP12.79□□□□□ -0.36
SHPRH-201ENST00000275233 USP17L10C9JJH3 530 aa12.79□□□□□ -0.36
SHPRH-201ENST00000275233 PGRMC1O00264 195 aaKnown RBP12.79□□□□□ -0.36
SHPRH-201ENST00000275233 MT-ND3P03897 115 aa12.79□□□□□ -0.36
SHPRH-201ENST00000275233 RC3H1Q5TC82 1133 aaKnown RBP12.79□□□□□ -0.36
SHPRH-201ENST00000275233 CXorf38Q8TB03 319 aa12.79□□□□□ -0.36
SHPRH-201ENST00000275233 IFT88Q13099 833 aa12.78□□□□□ -0.36
SHPRH-201ENST00000275233 AFG1LQ8WV93 481 aa12.78□□□□□ -0.36
SHPRH-201ENST00000275233 CFLARO15519 480 aa12.78□□□□□ -0.36
SHPRH-201ENST00000275233 MGEA5O60502 916 aa12.78□□□□□ -0.36
SHPRH-201ENST00000275233 TRIM67Q6ZTA4 783 aa12.78□□□□□ -0.36
SHPRH-201ENST00000275233 STAG1Q8WVM7 1258 aa12.78□□□□□ -0.36
SHPRH-201ENST00000275233 FAF2Q96CS3 445 aa12.78□□□□□ -0.36
SHPRH-201ENST00000275233 CDC23Q9UJX2 597 aa12.78□□□□□ -0.36
SHPRH-201ENST00000275233 GOLGA8MH3BSY2 632 aa12.78□□□□□ -0.36
SHPRH-201ENST00000275233 SLC16A4O15374 487 aa12.78□□□□□ -0.36
SHPRH-201ENST00000275233 ARL13BQ3SXY8 428 aa12.78□□□□□ -0.36
SHPRH-201ENST00000275233 THEM5Q8N1Q8 247 aa12.78□□□□□ -0.36
SHPRH-201ENST00000275233 FAM213AQ9BRX8 229 aa12.78□□□□□ -0.36
SHPRH-201ENST00000275233 DHX9Q08211 1270 aaKnown RBP12.78□□□□□ -0.36
SHPRH-201ENST00000275233 STXBP2Q15833 593 aa12.78□□□□□ -0.36
SHPRH-201ENST00000275233 CYB5R4Q7L1T6 521 aa12.78□□□□□ -0.36
SHPRH-201ENST00000275233 SYNDIG1LA6NDD5 238 aa12.78□□□□□ -0.36
SHPRH-201ENST00000275233 PI4K2BG5E9Z4 385 aa12.78□□□□□ -0.36
SHPRH-201ENST00000275233 CREB3O43889 395 aa12.78□□□□□ -0.36
SHPRH-201ENST00000275233 RNF219Q5W0B1 726 aaPredicted RBP12.78□□□□□ -0.36
SHPRH-201ENST00000275233 DYDC2Q96IM9 177 aa12.78□□□□□ -0.36
SHPRH-201ENST00000275233 HEMGNQ9BXL5 484 aa12.78□□□□□ -0.36
SHPRH-201ENST00000275233 ASNSP08243 561 aa12.78□□□□□ -0.36
SHPRH-201ENST00000275233 STAT3P40763 770 aa12.78□□□□□ -0.36
SHPRH-201ENST00000275233 PHEXP78562 749 aa12.78□□□□□ -0.36
SHPRH-201ENST00000275233 ZNF568Q3ZCX4 644 aa12.78□□□□□ -0.36
SHPRH-201ENST00000275233 GAS2L3Q86XJ1 694 aa12.78□□□□□ -0.36
SHPRH-201ENST00000275233 FOXP4Q8IVH2 680 aaPredicted RBP12.78□□□□□ -0.36
SHPRH-201ENST00000275233 TRIM49BA6NDI0 452 aa12.77□□□□□ -0.36
SHPRH-201ENST00000275233 MARCH10Q8NA82 808 aaPredicted RBP12.77□□□□□ -0.36
SHPRH-201ENST00000275233 TPX2Q9ULW0 747 aaKnown RBP12.77□□□□□ -0.36
SHPRH-201ENST00000275233 MINPP1Q9UNW1 487 aa12.77□□□□□ -0.36
SHPRH-201ENST00000275233 RNF123Q5XPI4 1314 aa12.77□□□□□ -0.36
SHPRH-201ENST00000275233 CLDN3O15551 220 aa12.77□□□□□ -0.36
SHPRH-201ENST00000275233 SUN1O94901 812 aa12.77□□□□□ -0.36
SHPRH-201ENST00000275233 TBC1D10CQ8IV04 446 aa12.77□□□□□ -0.36
SHPRH-201ENST00000275233 WHAMMQ8TF30 809 aa12.77□□□□□ -0.36
SHPRH-201ENST00000275233 PSPC1Q8WXF1 523 aaKnown RBP12.77□□□□□ -0.36
SHPRH-201ENST00000275233 TTC25Q96NG3 672 aa12.77□□□□□ -0.36
SHPRH-201ENST00000275233 MMTAG2Q9BU76 263 aaKnown RBP12.77□□□□□ -0.36
SHPRH-201ENST00000275233 THAP9Q9H5L6 903 aa12.77□□□□□ -0.36
SHPRH-201ENST00000275233 HEY1Q9Y5J3 304 aa12.77□□□□□ -0.36
SHPRH-201ENST00000275233 AFF2P51816 1311 aa12.77□□□□□ -0.37
SHPRH-201ENST00000275233 EVI5O60447 810 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms