RNA–Protein interactions for RNA: ENST00000272395.2

TRIM43-201, Transcript of tripartite motif containing 43, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM43, Length 1,682 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM43-201ENST00000272395 RIOX2Q8IUF8 465 aa9.67□□□□□ -0.86
TRIM43-201ENST00000272395 REXO1Q8N1G1 1221 aaKnown RBP9.67□□□□□ -0.86
TRIM43-201ENST00000272395 ERGIC2Q96RQ1 377 aa9.67□□□□□ -0.86
TRIM43-201ENST00000272395 DUSP9Q99956 384 aaKnown RBP9.67□□□□□ -0.86
TRIM43-201ENST00000272395 TUBGCP2Q9BSJ2 902 aa9.67□□□□□ -0.86
TRIM43-201ENST00000272395 RAB34Q9BZG1 259 aa9.67□□□□□ -0.86
TRIM43-201ENST00000272395 RIOX1Q9H6W3 641 aa9.67□□□□□ -0.86
TRIM43-201ENST00000272395 ANKZF1Q9H8Y5 726 aa9.67□□□□□ -0.86
TRIM43-201ENST00000272395 MAPK8IP1Q9UQF2 711 aa9.67□□□□□ -0.86
TRIM43-201ENST00000272395 A0A0G2JMZ2 1700 aa9.67□□□□□ -0.86
TRIM43-201ENST00000272395 ZSWIM8A7E2V4 1837 aa9.66□□□□□ -0.86
TRIM43-201ENST00000272395 TRIM49BA6NDI0 452 aa9.66□□□□□ -0.86
TRIM43-201ENST00000272395 PP2D1A8MPX8 630 aa9.66□□□□□ -0.86
TRIM43-201ENST00000272395 TNPO2O14787 897 aaKnown RBP9.66□□□□□ -0.86
TRIM43-201ENST00000272395 ATP2A1O14983 1001 aa9.66□□□□□ -0.86
TRIM43-201ENST00000272395 KRT86O43790 486 aa9.66□□□□□ -0.86
TRIM43-201ENST00000272395 CCNT1O60563 726 aaKnown RBP9.66□□□□□ -0.86
TRIM43-201ENST00000272395 EIF3JO75822 258 aaKnown RBP9.66□□□□□ -0.86
TRIM43-201ENST00000272395 ICAM1P05362 532 aa9.66□□□□□ -0.86
TRIM43-201ENST00000272395 FXR2P51116 673 aaKnown RBP eCLIP9.66□□□□□ -0.86
TRIM43-201ENST00000272395 ASIC1P78348 528 aa9.66□□□□□ -0.86
TRIM43-201ENST00000272395 CCNA1P78396 465 aa9.66□□□□□ -0.86
TRIM43-201ENST00000272395 PDE4DQ08499 809 aa9.66□□□□□ -0.86
TRIM43-201ENST00000272395 PDIA5Q14554 519 aa9.66□□□□□ -0.86
TRIM43-201ENST00000272395 PPP1R18Q6NYC8 613 aa9.66□□□□□ -0.86
TRIM43-201ENST00000272395 GPR142Q7Z601 462 aa9.66□□□□□ -0.86
TRIM43-201ENST00000272395 MTMR8Q96EF0 704 aa9.66□□□□□ -0.86
TRIM43-201ENST00000272395 TTYH3Q9C0H2 523 aa9.66□□□□□ -0.86
TRIM43-201ENST00000272395 GABRQQ9UN88 632 aa9.66□□□□□ -0.86
TRIM43-201ENST00000272395 REXO2Q9Y3B8 237 aaKnown RBP9.66□□□□□ -0.86
TRIM43-201ENST00000272395 TRIM17Q9Y577 477 aa9.66□□□□□ -0.86
TRIM43-201ENST00000272395 PARP14Q460N5 1801 aa9.65□□□□□ -0.86
TRIM43-201ENST00000272395 ANO9A1A5B4 782 aa9.65□□□□□ -0.86
TRIM43-201ENST00000272395 EIF3CLB5ME19 914 aaKnown RBP9.65□□□□□ -0.86
TRIM43-201ENST00000272395 ZBTB5O15062 677 aa9.65□□□□□ -0.86
TRIM43-201ENST00000272395 SLC26A4O43511 780 aa9.65□□□□□ -0.86
TRIM43-201ENST00000272395 SASH3O75995 380 aa9.65□□□□□ -0.86
TRIM43-201ENST00000272395 FDX1P10109 184 aa9.65□□□□□ -0.86
TRIM43-201ENST00000272395 MAPK4P31152 587 aa9.65□□□□□ -0.86
TRIM43-201ENST00000272395 HNRNPH3P31942 346 aaKnown RBP9.65□□□□□ -0.86
TRIM43-201ENST00000272395 PMS1P54277 932 aaKnown RBP9.65□□□□□ -0.86
TRIM43-201ENST00000272395 OAZ1P54368 228 aa9.65□□□□□ -0.86
TRIM43-201ENST00000272395 PRKCZQ05513 592 aa9.65□□□□□ -0.86
TRIM43-201ENST00000272395 CKAP4Q07065 602 aaKnown RBP9.65□□□□□ -0.86
TRIM43-201ENST00000272395 TBC1D8BQ0IIM8 1120 aa9.65□□□□□ -0.86
TRIM43-201ENST00000272395 TMEM266Q2M3C6 531 aa9.65□□□□□ -0.86
TRIM43-201ENST00000272395 LETM2Q2VYF4 491 aa9.65□□□□□ -0.86
TRIM43-201ENST00000272395 BEND6Q5SZJ8 279 aaPredicted RBP9.65□□□□□ -0.86
TRIM43-201ENST00000272395 FKBP15Q5T1M5 1219 aa9.65□□□□□ -0.86
TRIM43-201ENST00000272395 PAPD7Q5XG87 772 aaKnown RBP9.65□□□□□ -0.86
TRIM43-201ENST00000272395 WDR93Q6P2C0 686 aa9.65□□□□□ -0.86
TRIM43-201ENST00000272395 WDR59Q6PJI9 974 aa9.65□□□□□ -0.86
TRIM43-201ENST00000272395 SV2BQ7L1I2 683 aa9.65□□□□□ -0.86
TRIM43-201ENST00000272395 OTOP1Q7RTM1 612 aa9.65□□□□□ -0.86
TRIM43-201ENST00000272395 TRAPPC11Q7Z392 1133 aa9.65□□□□□ -0.86
TRIM43-201ENST00000272395 PLEKHH3Q7Z736 793 aa9.65□□□□□ -0.86
TRIM43-201ENST00000272395 FBXO11Q86XK2 927 aa9.65□□□□□ -0.86
TRIM43-201ENST00000272395 TRERF1Q96PN7 1200 aa9.65□□□□□ -0.86
TRIM43-201ENST00000272395 EIF3CQ99613 913 aaKnown RBP9.65□□□□□ -0.86
TRIM43-201ENST00000272395 CHP1Q99653 195 aa9.65□□□□□ -0.86
TRIM43-201ENST00000272395 TSGA10Q9BZW7 698 aa9.65□□□□□ -0.86
TRIM43-201ENST00000272395 ACBD3Q9H3P7 528 aa9.65□□□□□ -0.86
TRIM43-201ENST00000272395 ST7Q9NRC1 585 aa9.65□□□□□ -0.86
TRIM43-201ENST00000272395 RNF146Q9NTX7 359 aa9.65□□□□□ -0.86
TRIM43-201ENST00000272395 PSD3Q9NYI0 1048 aa9.65□□□□□ -0.86
TRIM43-201ENST00000272395 PUF60Q9UHX1 559 aaKnown RBP9.65□□□□□ -0.86
TRIM43-201ENST00000272395 HTTP42858 3142 aa9.65□□□□□ -0.86
TRIM43-201ENST00000272395 PNMA6FA0A0J9YX94 578 aa9.64□□□□□ -0.87
TRIM43-201ENST00000272395 A0A0U1RQJ8 604 aa9.64□□□□□ -0.87
TRIM43-201ENST00000272395 PES1O00541 588 aaKnown RBP9.64□□□□□ -0.87
TRIM43-201ENST00000272395 NFIBO00712 420 aa9.64□□□□□ -0.87
TRIM43-201ENST00000272395 COBLO75128 1261 aa9.64□□□□□ -0.87
TRIM43-201ENST00000272395 SLC25A27O95847 323 aa9.64□□□□□ -0.87
TRIM43-201ENST00000272395 TRIM21P19474 475 aaKnown RBP9.64□□□□□ -0.87
TRIM43-201ENST00000272395 OAS2P29728 719 aaKnown RBP9.64□□□□□ -0.87
TRIM43-201ENST00000272395 MTIF2P46199 727 aaKnown RBP9.64□□□□□ -0.87
TRIM43-201ENST00000272395 PSMD2Q13200 908 aa9.64□□□□□ -0.87
TRIM43-201ENST00000272395 CCDC122Q5T0U0 273 aa9.64□□□□□ -0.87
TRIM43-201ENST00000272395 ANKRD40Q6AI12 368 aa9.64□□□□□ -0.87
TRIM43-201ENST00000272395 CENPPQ6IPU0 288 aa9.64□□□□□ -0.87
TRIM43-201ENST00000272395 KIAA1328Q86T90 577 aa9.64□□□□□ -0.87
TRIM43-201ENST00000272395 TXLNBQ8N3L3 684 aa9.64□□□□□ -0.87
TRIM43-201ENST00000272395 SHCBP1Q8NEM2 672 aa9.64□□□□□ -0.87
TRIM43-201ENST00000272395 ATRIPQ8WXE1 791 aa9.64□□□□□ -0.87
TRIM43-201ENST00000272395 CLEC4DQ8WXI8 215 aa9.64□□□□□ -0.87
TRIM43-201ENST00000272395 BBXQ8WY36 941 aaPredicted RBP9.64□□□□□ -0.87
TRIM43-201ENST00000272395 COA7Q96BR5 231 aa9.64□□□□□ -0.87
TRIM43-201ENST00000272395 CNOT6LQ96LI5 555 aaKnown RBP9.64□□□□□ -0.87
TRIM43-201ENST00000272395 MTMR9Q96QG7 549 aa9.64□□□□□ -0.87
TRIM43-201ENST00000272395 MMP19Q99542 508 aa9.64□□□□□ -0.87
TRIM43-201ENST00000272395 EDEM3Q9BZQ6 932 aa9.64□□□□□ -0.87
TRIM43-201ENST00000272395 EPC1Q9H2F5 836 aa9.64□□□□□ -0.87
TRIM43-201ENST00000272395 MROH8Q9H579 483 aa9.64□□□□□ -0.87
TRIM43-201ENST00000272395 ZKSCAN7Q9P0L1 754 aaPredicted RBP9.64□□□□□ -0.87
TRIM43-201ENST00000272395 CALCOCO1Q9P1Z2 691 aa9.64□□□□□ -0.87
TRIM43-201ENST00000272395 L1RE1Q9UN81 338 aa9.64□□□□□ -0.87
TRIM43-201ENST00000272395 TARSL2A2RTX5 802 aaKnown RBP9.64□□□□□ -0.87
TRIM43-201ENST00000272395 B4DLN1 442 aa9.64□□□□□ -0.87
TRIM43-201ENST00000272395 PGK2P07205 417 aa9.64□□□□□ -0.87
TRIM43-201ENST00000272395 ADORA2AP29274 412 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms