RNA–Protein interactions for RNA: ENST00000266679.8

CPSF6-201, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 1 (best) BASIC

Gene CPSF6, Length 2,229 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-201ENST00000266679 STAT2P52630 851 aa14.19□□□□□ -0.14
CPSF6-201ENST00000266679 GYS2P54840 703 aa14.19□□□□□ -0.14
CPSF6-201ENST00000266679 ARID5AQ03989 594 aa14.19□□□□□ -0.14
CPSF6-201ENST00000266679 CASP8Q14790 479 aa14.19□□□□□ -0.14
CPSF6-201ENST00000266679 ENOX2Q16206 610 aaKnown RBP14.19□□□□□ -0.14
CPSF6-201ENST00000266679 EDRF1Q3B7T1 1238 aa14.19□□□□□ -0.14
CPSF6-201ENST00000266679 SLC9C1Q4G0N8 1177 aa14.19□□□□□ -0.14
CPSF6-201ENST00000266679 SAMD1Q6SPF0 538 aaPredicted RBP14.19□□□□□ -0.14
CPSF6-201ENST00000266679 PPP4R3CPQ6ZMV5 832 aa14.19□□□□□ -0.14
CPSF6-201ENST00000266679 RPGRIP1Q96KN7 1286 aa14.19□□□□□ -0.14
CPSF6-201ENST00000266679 EIF2AK1Q9BQI3 630 aaKnown RBP14.19□□□□□ -0.14
CPSF6-201ENST00000266679 BHMT2Q9H2M3 363 aa14.19□□□□□ -0.14
CPSF6-201ENST00000266679 BCAS3Q9H6U6 928 aa14.19□□□□□ -0.14
CPSF6-201ENST00000266679 ARHGEF10LQ9HCE6 1279 aa14.19□□□□□ -0.14
CPSF6-201ENST00000266679 RGL1Q9NZL6 768 aa14.19□□□□□ -0.14
CPSF6-201ENST00000266679 SALL4Q9UJQ4 1053 aa14.19□□□□□ -0.14
CPSF6-201ENST00000266679 HDAC9Q9UKV0 1011 aa14.19□□□□□ -0.14
CPSF6-201ENST00000266679 ZNRF3Q9ULT6 936 aa14.19□□□□□ -0.14
CPSF6-201ENST00000266679 PASKQ96RG2 1323 aa14.19□□□□□ -0.14
CPSF6-201ENST00000266679 ZMYND10O75800 440 aa14.19□□□□□ -0.14
CPSF6-201ENST00000266679 EIF3JO75822 258 aaKnown RBP14.19□□□□□ -0.14
CPSF6-201ENST00000266679 ITGBL1O95965 494 aaPredicted RBP14.19□□□□□ -0.14
CPSF6-201ENST00000266679 CFBP00751 764 aa14.19□□□□□ -0.14
CPSF6-201ENST00000266679 SERPING1P05155 500 aa14.19□□□□□ -0.14
CPSF6-201ENST00000266679 GMPSP49915 693 aaPredicted RBP14.19□□□□□ -0.14
CPSF6-201ENST00000266679 FAM193AP78312 1265 aa14.19□□□□□ -0.14
CPSF6-201ENST00000266679 KCNH2Q12809 1159 aa14.19□□□□□ -0.14
CPSF6-201ENST00000266679 NFRKBQ6P4R8 1299 aa14.19□□□□□ -0.14
CPSF6-201ENST00000266679 SUPT20HQ8NEM7 779 aa14.19□□□□□ -0.14
CPSF6-201ENST00000266679 COG1Q8WTW3 980 aa14.19□□□□□ -0.14
CPSF6-201ENST00000266679 PSMB7Q99436 277 aa14.19□□□□□ -0.14
CPSF6-201ENST00000266679 FRMD4AQ9P2Q2 1039 aaPredicted RBP14.19□□□□□ -0.14
CPSF6-201ENST00000266679 FAM184BQ9ULE4 1060 aa14.19□□□□□ -0.14
CPSF6-201ENST00000266679 PJA2O43164 708 aa14.18□□□□□ -0.14
CPSF6-201ENST00000266679 CHMP2AO43633 222 aa14.18□□□□□ -0.14
CPSF6-201ENST00000266679 BUB1O43683 1085 aa14.18□□□□□ -0.14
CPSF6-201ENST00000266679 TBCAO75347 108 aaKnown RBP14.18□□□□□ -0.14
CPSF6-201ENST00000266679 TNNT3P45378 269 aaPredicted RBP14.18□□□□□ -0.14
CPSF6-201ENST00000266679 UBXN2AP68543 259 aa14.18□□□□□ -0.14
CPSF6-201ENST00000266679 ZYXQ15942 572 aaKnown RBP14.18□□□□□ -0.14
CPSF6-201ENST00000266679 GSPT2Q8IYD1 628 aaKnown RBP14.18□□□□□ -0.14
CPSF6-201ENST00000266679 TBC1D5Q92609 795 aa14.18□□□□□ -0.14
CPSF6-201ENST00000266679 WDR18Q9BV38 432 aa14.18□□□□□ -0.14
CPSF6-201ENST00000266679 NUCKS1Q9H1E3 243 aaKnown RBP14.18□□□□□ -0.14
CPSF6-201ENST00000266679 GANQ9H2C0 597 aa14.18□□□□□ -0.14
CPSF6-201ENST00000266679 RABGAP1Q9Y3P9 1069 aa14.18□□□□□ -0.14
CPSF6-201ENST00000266679 CALUO43852 315 aaPredicted RBP14.18□□□□□ -0.14
CPSF6-201ENST00000266679 N4BP1O75113 896 aaKnown RBP14.18□□□□□ -0.14
CPSF6-201ENST00000266679 CYP3A4P08684 503 aa14.18□□□□□ -0.14
CPSF6-201ENST00000266679 CYP2C19P33261 490 aa14.18□□□□□ -0.14
CPSF6-201ENST00000266679 HOXD13P35453 343 aa14.18□□□□□ -0.14
CPSF6-201ENST00000266679 NAP1L1P55209 391 aaKnown RBP14.18□□□□□ -0.14
CPSF6-201ENST00000266679 GPS2Q13227 327 aa14.18□□□□□ -0.14
CPSF6-201ENST00000266679 CTTNQ14247 550 aaKnown RBP14.18□□□□□ -0.14
CPSF6-201ENST00000266679 ASIC2Q16515 512 aa14.18□□□□□ -0.14
CPSF6-201ENST00000266679 KNOP1Q1ED39 458 aaKnown RBP14.18□□□□□ -0.14
CPSF6-201ENST00000266679 IQCEQ6IPM2 695 aa14.18□□□□□ -0.14
CPSF6-201ENST00000266679 EPM2AIP1Q7L775 607 aaPredicted RBP14.18□□□□□ -0.14
CPSF6-201ENST00000266679 FAM133AQ8N9E0 248 aa14.18□□□□□ -0.14
CPSF6-201ENST00000266679 SMARCAL1Q9NZC9 954 aa14.18□□□□□ -0.14
CPSF6-201ENST00000266679 ZKSCAN7Q9P0L1 754 aaPredicted RBP14.18□□□□□ -0.14
CPSF6-201ENST00000266679 HERC5Q9UII4 1024 aaKnown RBP14.18□□□□□ -0.14
CPSF6-201ENST00000266679 STK24Q9Y6E0 443 aa14.18□□□□□ -0.14
CPSF6-201ENST00000266679 TRPM7Q96QT4 1865 aa14.18□□□□□ -0.14
CPSF6-201ENST00000266679 IGLV3-22A0A075B6J6 115 aa14.17□□□□□ -0.14
CPSF6-201ENST00000266679 SPDYE2BA6NHP3 402 aa14.17□□□□□ -0.14
CPSF6-201ENST00000266679 LRRIQ3A6PVS8 624 aaPredicted RBP14.17□□□□□ -0.14
CPSF6-201ENST00000266679 PIK3CDO00329 1044 aa14.17□□□□□ -0.14
CPSF6-201ENST00000266679 GCNT3O95395 438 aa14.17□□□□□ -0.14
CPSF6-201ENST00000266679 SPDYE6P0CI01 402 aa14.17□□□□□ -0.14
CPSF6-201ENST00000266679 ACTN1P12814 892 aa14.17□□□□□ -0.14
CPSF6-201ENST00000266679 CXCR5P32302 372 aa14.17□□□□□ -0.14
CPSF6-201ENST00000266679 DCAF17Q5H9S7 520 aaPredicted RBP14.17□□□□□ -0.14
CPSF6-201ENST00000266679 PNMA8AQ86V59 439 aaPredicted RBP14.17□□□□□ -0.14
CPSF6-201ENST00000266679 CREG2Q8IUH2 290 aa14.17□□□□□ -0.14
CPSF6-201ENST00000266679 SYN2Q92777 582 aaPredicted RBP14.17□□□□□ -0.14
CPSF6-201ENST00000266679 ZFP91Q96JP5 570 aaPredicted RBP14.17□□□□□ -0.14
CPSF6-201ENST00000266679 OSBPL9Q96SU4 736 aa14.17□□□□□ -0.14
CPSF6-201ENST00000266679 POLR3CQ9BUI4 534 aaPredicted RBP14.17□□□□□ -0.14
CPSF6-201ENST00000266679 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP14.17□□□□□ -0.143e-8■□□□□ 9.6
CPSF6-201ENST00000266679 GOPCQ9HD26 462 aa14.17□□□□□ -0.14
CPSF6-201ENST00000266679 EHD2Q9NZN4 543 aa14.17□□□□□ -0.14
CPSF6-201ENST00000266679 ZBTB12Q9Y330 459 aaPredicted RBP14.17□□□□□ -0.14
CPSF6-201ENST00000266679 HYOU1Q9Y4L1 999 aa14.17□□□□□ -0.14
CPSF6-201ENST00000266679 ASTN1O14525 1302 aa14.17□□□□□ -0.14
CPSF6-201ENST00000266679 TARSL2A2RTX5 802 aaKnown RBP14.17□□□□□ -0.14
CPSF6-201ENST00000266679 EYA4O95677 639 aa14.17□□□□□ -0.14
CPSF6-201ENST00000266679 MCM3P25205 808 aa14.17□□□□□ -0.14
CPSF6-201ENST00000266679 CIAPIN1Q6FI81 312 aa14.17□□□□□ -0.14
CPSF6-201ENST00000266679 TXLNBQ8N3L3 684 aa14.17□□□□□ -0.14
CPSF6-201ENST00000266679 PIGOQ8TEQ8 1089 aa14.17□□□□□ -0.14
CPSF6-201ENST00000266679 DYDC2Q96IM9 177 aa14.17□□□□□ -0.14
CPSF6-201ENST00000266679 NOX5Q96PH1 765 aa14.17□□□□□ -0.14
CPSF6-201ENST00000266679 CREBZFQ9NS37 354 aa14.17□□□□□ -0.14
CPSF6-201ENST00000266679 GPRC5DQ9NZD1 345 aa14.17□□□□□ -0.14
CPSF6-201ENST00000266679 ZNF70Q9UC06 446 aaPredicted RBP14.17□□□□□ -0.14
CPSF6-201ENST00000266679 ARMCX3Q9UH62 379 aaPredicted RBP14.17□□□□□ -0.14
CPSF6-201ENST00000266679 ZBTB21Q9ULJ3 1066 aa14.17□□□□□ -0.14
CPSF6-201ENST00000266679 TRAF3IP3Q9Y228 551 aa14.17□□□□□ -0.14
CPSF6-201ENST00000266679 POLR2AP24928 1970 aaKnown RBP14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 735 ms