RNA–Protein interactions for RNA: ENST00000266079.4

PRPF6-201, Transcript of pre-mRNA processing factor 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF6, Length 3,044 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF6-201ENST00000266079 ERVK-9P63128 1117 aa13.93□□□□□ -0.18
PRPF6-201ENST00000266079 ERVK-24P63145 666 aa13.93□□□□□ -0.18
PRPF6-201ENST00000266079 ATP2C1P98194 919 aaPredicted RBP13.93□□□□□ -0.18
PRPF6-201ENST00000266079 CALCRLQ16602 461 aa13.93□□□□□ -0.18
PRPF6-201ENST00000266079 CT47A1Q5JQC4 288 aaPredicted RBP13.93□□□□□ -0.18
PRPF6-201ENST00000266079 FAM76AQ8TAV0 307 aa13.93□□□□□ -0.18
PRPF6-201ENST00000266079 SLC10A3P09131 477 aa13.93□□□□□ -0.18
PRPF6-201ENST00000266079 PTPREP23469 700 aa13.93□□□□□ -0.18
PRPF6-201ENST00000266079 GGCXP38435 758 aa13.93□□□□□ -0.18
PRPF6-201ENST00000266079 ARHGEF16Q5VV41 709 aa13.93□□□□□ -0.18
PRPF6-201ENST00000266079 EEPD1Q7L9B9 569 aa13.93□□□□□ -0.18
PRPF6-201ENST00000266079 CYP39A1Q9NYL5 469 aa13.93□□□□□ -0.18
PRPF6-201ENST00000266079 MYPNQ86TC9 1320 aa13.92□□□□□ -0.18
PRPF6-201ENST00000266079 UNCXA6NJT0 531 aa13.92□□□□□ -0.18
PRPF6-201ENST00000266079 PIK3CDO00329 1044 aa13.92□□□□□ -0.18
PRPF6-201ENST00000266079 POLR2DO15514 142 aaKnown RBP13.92□□□□□ -0.18
PRPF6-201ENST00000266079 FOSP01100 380 aaPredicted RBP13.92□□□□□ -0.18
PRPF6-201ENST00000266079 FXR1P51114 621 aaKnown RBP eCLIP13.92□□□□□ -0.18
PRPF6-201ENST00000266079 HSD17B4P51659 736 aa13.92□□□□□ -0.18
PRPF6-201ENST00000266079 FSTL1Q12841 308 aa13.92□□□□□ -0.18
PRPF6-201ENST00000266079 SPATA1Q5VX52 437 aa13.92□□□□□ -0.18
PRPF6-201ENST00000266079 KCNV1Q6PIU1 500 aa13.92□□□□□ -0.18
PRPF6-201ENST00000266079 C4orf32Q8N8J7 132 aa13.92□□□□□ -0.18
PRPF6-201ENST00000266079 CRACR2AQ9BSW2 395 aa13.92□□□□□ -0.18
PRPF6-201ENST00000266079 CEP83Q9Y592 693 aa13.92□□□□□ -0.18
PRPF6-201ENST00000266079 POTEMA6NI47 508 aa13.92□□□□□ -0.18
PRPF6-201ENST00000266079 FAM155AB1AL88 458 aaPredicted RBP13.92□□□□□ -0.18
PRPF6-201ENST00000266079 GYPCP04921 128 aa13.92□□□□□ -0.18
PRPF6-201ENST00000266079 OR52Z1P0C646 297 aa13.92□□□□□ -0.18
PRPF6-201ENST00000266079 SREBF1P36956 1147 aa13.92□□□□□ -0.18
PRPF6-201ENST00000266079 DTHD1Q6ZMT9 781 aa13.92□□□□□ -0.18
PRPF6-201ENST00000266079 MB21D1Q8N884 522 aa13.92□□□□□ -0.18
PRPF6-201ENST00000266079 RASSF8Q8NHQ8 419 aa13.92□□□□□ -0.18
PRPF6-201ENST00000266079 CTAGE1Q96RT6 745 aa13.92□□□□□ -0.18
PRPF6-201ENST00000266079 RABGAP1Q9Y3P9 1069 aa13.92□□□□□ -0.18
PRPF6-201ENST00000266079 PARP14Q460N5 1801 aa13.92□□□□□ -0.18
PRPF6-201ENST00000266079 TARSL2A2RTX5 802 aaKnown RBP13.91□□□□□ -0.18
PRPF6-201ENST00000266079 TESPA1A2RU30 521 aaPredicted RBP13.91□□□□□ -0.18
PRPF6-201ENST00000266079 DDX39AO00148 427 aaKnown RBP13.91□□□□□ -0.18
PRPF6-201ENST00000266079 OAZ1P54368 228 aa13.91□□□□□ -0.18
PRPF6-201ENST00000266079 FILIP1LQ4L180 1135 aa13.91□□□□□ -0.18
PRPF6-201ENST00000266079 TRAPPC11Q7Z392 1133 aa13.91□□□□□ -0.18
PRPF6-201ENST00000266079 ANKRD23Q86SG2 305 aa13.91□□□□□ -0.18
PRPF6-201ENST00000266079 SYMPKQ92797 1274 aaKnown RBP13.91□□□□□ -0.18
PRPF6-201ENST00000266079 DONSONQ9NYP3 566 aa13.91□□□□□ -0.18
PRPF6-201ENST00000266079 SRPRBQ9Y5M8 271 aaKnown RBP13.91□□□□□ -0.18
PRPF6-201ENST00000266079 DNAH12Q6ZR08 3092 aa13.91□□□□□ -0.18
PRPF6-201ENST00000266079 AGPSO00116 658 aa13.91□□□□□ -0.18
PRPF6-201ENST00000266079 CLGNO14967 610 aa13.91□□□□□ -0.18
PRPF6-201ENST00000266079 PPFIA1Q13136 1202 aa13.91□□□□□ -0.18
PRPF6-201ENST00000266079 FBXW10Q5XX13 1052 aa13.91□□□□□ -0.18
PRPF6-201ENST00000266079 KANK3Q6NY19 840 aa13.91□□□□□ -0.18
PRPF6-201ENST00000266079 TRMT1LQ7Z2T5 733 aaKnown RBP13.91□□□□□ -0.18
PRPF6-201ENST00000266079 RIOX2Q8IUF8 465 aa13.91□□□□□ -0.18
PRPF6-201ENST00000266079 GRAMD1CQ8IYS0 662 aa13.91□□□□□ -0.18
PRPF6-201ENST00000266079 GPRC5AQ8NFJ5 357 aa13.91□□□□□ -0.18
PRPF6-201ENST00000266079 SPATA20Q8TB22 786 aa13.91□□□□□ -0.18
PRPF6-201ENST00000266079 RNF216Q9NWF9 866 aaPredicted RBP13.91□□□□□ -0.18
PRPF6-201ENST00000266079 ITIH6Q6UXX5 1313 aa13.91□□□□□ -0.18
PRPF6-201ENST00000266079 GOLGA6CA6NDK9 693 aa13.9□□□□□ -0.18
PRPF6-201ENST00000266079 CHMP2AO43633 222 aa13.9□□□□□ -0.18
PRPF6-201ENST00000266079 GOLGA6DP0CG33 693 aa13.9□□□□□ -0.18
PRPF6-201ENST00000266079 DEFB115Q30KQ5 88 aa13.9□□□□□ -0.18
PRPF6-201ENST00000266079 CDKAL1Q5VV42 579 aa13.9□□□□□ -0.18
PRPF6-201ENST00000266079 PARK7Q99497 189 aaKnown RBP13.9□□□□□ -0.18
PRPF6-201ENST00000266079 WDR11Q9BZH6 1224 aa13.9□□□□□ -0.18
PRPF6-201ENST00000266079 GOLGA6AQ9NYA3 693 aa13.9□□□□□ -0.18
PRPF6-201ENST00000266079 MANSC4A6NHS7 340 aaPredicted RBP13.9□□□□□ -0.18
PRPF6-201ENST00000266079 ATP2A1O14983 1001 aa13.9□□□□□ -0.18
PRPF6-201ENST00000266079 CYP26C1Q6V0L0 522 aa13.9□□□□□ -0.18
PRPF6-201ENST00000266079 CNPY4Q8N129 248 aa13.9□□□□□ -0.18
PRPF6-201ENST00000266079 STAMQ92783 540 aa13.9□□□□□ -0.18
PRPF6-201ENST00000266079 ARP10275 920 aa13.9□□□□□ -0.18
PRPF6-201ENST00000266079 SP4Q02446 784 aa13.9□□□□□ -0.18
PRPF6-201ENST00000266079 RPAINQ86UA6 219 aa13.9□□□□□ -0.18
PRPF6-201ENST00000266079 IFNL1Q8IU54 200 aa13.9□□□□□ -0.18
PRPF6-201ENST00000266079 BCAS4Q8TDM0 211 aa13.9□□□□□ -0.18
PRPF6-201ENST00000266079 HAS1Q92839 578 aa13.9□□□□□ -0.18
PRPF6-201ENST00000266079 CAPNS2Q96L46 248 aa13.9□□□□□ -0.18
PRPF6-201ENST00000266079 PDCD2LQ9BRP1 358 aa13.9□□□□□ -0.18
PRPF6-201ENST00000266079 PXMP2Q9NR77 195 aa13.9□□□□□ -0.18
PRPF6-201ENST00000266079 LOC285556D6RIA3 1793 aa13.89□□□□□ -0.19
PRPF6-201ENST00000266079 ITGB5P18084 799 aa13.89□□□□□ -0.19
PRPF6-201ENST00000266079 MRPS9P82933 396 aaKnown RBP13.89□□□□□ -0.19
PRPF6-201ENST00000266079 KCTD2Q14681 263 aa13.89□□□□□ -0.19
PRPF6-201ENST00000266079 MMS19Q96T76 1030 aa13.89□□□□□ -0.19
PRPF6-201ENST00000266079 CAPS2Q9BXY5 557 aa13.89□□□□□ -0.19
PRPF6-201ENST00000266079 ABHD10Q9NUJ1 306 aa13.89□□□□□ -0.19
PRPF6-201ENST00000266079 SYNRGQ9UMZ2 1314 aa13.89□□□□□ -0.19
PRPF6-201ENST00000266079 A0A087X0B3 334 aa13.89□□□□□ -0.19
PRPF6-201ENST00000266079 ACTN4O43707 911 aaKnown RBP13.89□□□□□ -0.19
PRPF6-201ENST00000266079 BMP15O95972 392 aa13.89□□□□□ -0.19
PRPF6-201ENST00000266079 USP11P51784 963 aa13.89□□□□□ -0.19
PRPF6-201ENST00000266079 STX17P56962 302 aa13.89□□□□□ -0.19
PRPF6-201ENST00000266079 PGM5Q15124 567 aa13.89□□□□□ -0.19
PRPF6-201ENST00000266079 CRYGNQ8WXF5 182 aa13.89□□□□□ -0.19
PRPF6-201ENST00000266079 LENG9Q96B70 501 aa13.89□□□□□ -0.19
PRPF6-201ENST00000266079 RPGRIP1Q96KN7 1286 aa13.89□□□□□ -0.19
PRPF6-201ENST00000266079 GDAP1L1Q96MZ0 367 aa13.89□□□□□ -0.19
PRPF6-201ENST00000266079 SELENOOQ9BVL4 669 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms