RNA–Protein interactions for RNA: ENST00000265304.10

SSBP1-201, Transcript of single stranded DNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSBP1, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-201ENST00000265304 XKR3Q5GH77 459 aa16■□□□□ 0.15
SSBP1-201ENST00000265304 RESP18Q5W5W9 173 aa16■□□□□ 0.15
SSBP1-201ENST00000265304 KRT79Q5XKE5 535 aa16■□□□□ 0.15
SSBP1-201ENST00000265304 HAUS3Q68CZ6 603 aa16■□□□□ 0.15
SSBP1-201ENST00000265304 PDXDC2PQ6P474 469 aa16■□□□□ 0.15
SSBP1-201ENST00000265304 SHC4Q6S5L8 630 aa16■□□□□ 0.15
SSBP1-201ENST00000265304 USP49Q70CQ1 688 aa16■□□□□ 0.15
SSBP1-201ENST00000265304 TNS4Q8IZW8 715 aa16■□□□□ 0.15
SSBP1-201ENST00000265304 BBXQ8WY36 941 aaPredicted RBP16■□□□□ 0.15
SSBP1-201ENST00000265304 DYDC2Q96IM9 177 aa16■□□□□ 0.15
SSBP1-201ENST00000265304 FAM167AQ96KS9 214 aa16■□□□□ 0.15
SSBP1-201ENST00000265304 GLT1D1Q96MS3 346 aa16■□□□□ 0.15
SSBP1-201ENST00000265304 CLIC6Q96NY7 704 aa16■□□□□ 0.15
SSBP1-201ENST00000265304 LXNQ9BS40 222 aa16■□□□□ 0.15
SSBP1-201ENST00000265304 ANKEF1Q9NU02 776 aa16■□□□□ 0.15
SSBP1-201ENST00000265304 SAMM50Q9Y512 469 aa16■□□□□ 0.15
SSBP1-201ENST00000265304 COL1A2P08123 1366 aa16■□□□□ 0.15
SSBP1-201ENST00000265304 PP2D1A8MPX8 630 aa15.99■□□□□ 0.15
SSBP1-201ENST00000265304 HBP1O60381 514 aa15.99■□□□□ 0.15
SSBP1-201ENST00000265304 MYL3P08590 195 aa15.99■□□□□ 0.15
SSBP1-201ENST00000265304 ZNF286BP0CG31 522 aa15.99■□□□□ 0.15
SSBP1-201ENST00000265304 EN2P19622 333 aaPredicted RBP15.99■□□□□ 0.15
SSBP1-201ENST00000265304 GRB10Q13322 594 aa15.99■□□□□ 0.15
SSBP1-201ENST00000265304 MFSD10Q14728 455 aa15.99■□□□□ 0.15
SSBP1-201ENST00000265304 KIAA0753Q2KHM9 967 aa15.99■□□□□ 0.15
SSBP1-201ENST00000265304 TMEM119Q4V9L6 283 aa15.99■□□□□ 0.15
SSBP1-201ENST00000265304 ANO5Q75V66 913 aa15.99■□□□□ 0.15
SSBP1-201ENST00000265304 TRIM50Q86XT4 487 aa15.99■□□□□ 0.15
SSBP1-201ENST00000265304 GLG1Q92896 1179 aa15.99■□□□□ 0.15
SSBP1-201ENST00000265304 PNMA5Q96PV4 448 aa15.99■□□□□ 0.15
SSBP1-201ENST00000265304 NACC1Q96RE7 527 aa15.99■□□□□ 0.15
SSBP1-201ENST00000265304 DBR1Q9UK59 544 aaKnown RBP15.99■□□□□ 0.15
SSBP1-201ENST00000265304 MKI67P46013 3256 aaKnown RBP15.99■□□□□ 0.15
SSBP1-201ENST00000265304 NRCAMQ92823 1304 aa15.98■□□□□ 0.15
SSBP1-201ENST00000265304 KDM3AQ9Y4C1 1321 aa15.98■□□□□ 0.15
SSBP1-201ENST00000265304 MBLAC1A4D2B0 266 aaPredicted RBP15.98■□□□□ 0.15
SSBP1-201ENST00000265304 BACH1O14867 736 aa15.98■□□□□ 0.15
SSBP1-201ENST00000265304 CDC25AP30304 524 aa15.98■□□□□ 0.15
SSBP1-201ENST00000265304 UBA7P41226 1012 aa15.98■□□□□ 0.15
SSBP1-201ENST00000265304 ME1P48163 572 aa15.98■□□□□ 0.15
SSBP1-201ENST00000265304 NBPF20Q3BBV1 942 aa15.98■□□□□ 0.15
SSBP1-201ENST00000265304 ZNF484Q5JVG2 852 aa15.98■□□□□ 0.15
SSBP1-201ENST00000265304 UTP14CQ5TAP6 766 aaKnown RBP15.98■□□□□ 0.15
SSBP1-201ENST00000265304 PDE4DIPQ5VU43 2346 aa15.98■□□□□ 0.15
SSBP1-201ENST00000265304 ANKRD33Q7Z3H0 272 aa15.98■□□□□ 0.15
SSBP1-201ENST00000265304 NECAB2Q7Z6G3 386 aa15.98■□□□□ 0.15
SSBP1-201ENST00000265304 BANK1Q8NDB2 785 aa15.98■□□□□ 0.15
SSBP1-201ENST00000265304 PAWRQ96IZ0 340 aaKnown RBP15.98■□□□□ 0.15
SSBP1-201ENST00000265304 EPSTI1Q96J88 318 aa15.98■□□□□ 0.15
SSBP1-201ENST00000265304 TOX2Q96NM4 488 aa15.98■□□□□ 0.15
SSBP1-201ENST00000265304 NT5C3AQ9H0P0 336 aa15.98■□□□□ 0.15
SSBP1-201ENST00000265304 NRBP2Q9NSY0 501 aa15.98■□□□□ 0.15
SSBP1-201ENST00000265304 HPSEQ9Y251 543 aa15.98■□□□□ 0.15
SSBP1-201ENST00000265304 A0A0U1RQG5 324 aaPredicted RBP15.97■□□□□ 0.15
SSBP1-201ENST00000265304 POTEB3A0JP26 581 aa15.97■□□□□ 0.15
SSBP1-201ENST00000265304 RRN3P2A6NIE6 340 aa15.97■□□□□ 0.15
SSBP1-201ENST00000265304 ARVCFO00192 962 aa15.97■□□□□ 0.15
SSBP1-201ENST00000265304 OATP04181 439 aa15.97■□□□□ 0.15
SSBP1-201ENST00000265304 CCT6AP40227 531 aaKnown RBP15.97■□□□□ 0.15
SSBP1-201ENST00000265304 PRKCEQ02156 737 aa15.97■□□□□ 0.15
SSBP1-201ENST00000265304 ITGA7Q13683 1181 aa15.97■□□□□ 0.15
SSBP1-201ENST00000265304 CTTNQ14247 550 aaKnown RBP15.97■□□□□ 0.15
SSBP1-201ENST00000265304 CSPP1Q1MSJ5 1256 aa15.97■□□□□ 0.15
SSBP1-201ENST00000265304 MARCH8Q5T0T0 291 aa15.97■□□□□ 0.15
SSBP1-201ENST00000265304 POTEBQ6S5H4 581 aa15.97■□□□□ 0.15
SSBP1-201ENST00000265304 SLC39A5Q6ZMH5 540 aa15.97■□□□□ 0.15
SSBP1-201ENST00000265304 CABP7Q86V35 215 aa15.97■□□□□ 0.15
SSBP1-201ENST00000265304 TPH2Q8IWU9 490 aa15.97■□□□□ 0.15
SSBP1-201ENST00000265304 SNX29Q8TEQ0 813 aa15.97■□□□□ 0.15
SSBP1-201ENST00000265304 SYMPKQ92797 1274 aaKnown RBP15.97■□□□□ 0.15
SSBP1-201ENST00000265304 CTAGE1Q96RT6 745 aa15.97■□□□□ 0.15
SSBP1-201ENST00000265304 STARD7Q9NQZ5 370 aa15.97■□□□□ 0.15
SSBP1-201ENST00000265304 PDLIM7Q9NR12 457 aa15.97■□□□□ 0.15
SSBP1-201ENST00000265304 GTF2IRD1Q9UHL9 959 aa15.97■□□□□ 0.15
SSBP1-201ENST00000265304 MYH11P35749 1972 aa15.96■□□□□ 0.15
SSBP1-201ENST00000265304 IGKV6-21A0A0C4DH24 114 aa15.96■□□□□ 0.15
SSBP1-201ENST00000265304 SMIM10L2AP0DMW4 78 aa15.96■□□□□ 0.15
SSBP1-201ENST00000265304 SMIM10L2BP0DMW5 78 aa15.96■□□□□ 0.15
SSBP1-201ENST00000265304 INSRRP14616 1297 aa15.96■□□□□ 0.15
SSBP1-201ENST00000265304 NCLP19338 710 aaKnown RBP15.96■□□□□ 0.15
SSBP1-201ENST00000265304 YWHABP31946 246 aaKnown RBP15.96■□□□□ 0.15
SSBP1-201ENST00000265304 CYP4A11Q02928 519 aa15.96■□□□□ 0.15
SSBP1-201ENST00000265304 HIC1Q14526 733 aa15.96■□□□□ 0.15
SSBP1-201ENST00000265304 E2F4Q16254 413 aa15.96■□□□□ 0.15
SSBP1-201ENST00000265304 NAALADL2Q58DX5 795 aa15.96■□□□□ 0.15
SSBP1-201ENST00000265304 OTUD6AQ7L8S5 288 aa15.96■□□□□ 0.15
SSBP1-201ENST00000265304 RPAINQ86UA6 219 aa15.96■□□□□ 0.15
SSBP1-201ENST00000265304 DIS3LQ8TF46 1054 aaKnown RBP15.96■□□□□ 0.15
SSBP1-201ENST00000265304 LRRC15Q8TF66 581 aa15.96■□□□□ 0.15
SSBP1-201ENST00000265304 C11orf49Q9H6J7 331 aa15.96■□□□□ 0.15
SSBP1-201ENST00000265304 GDPD2Q9HCC8 539 aa15.96■□□□□ 0.15
SSBP1-201ENST00000265304 KIAA1024Q9UPX6 916 aa15.96■□□□□ 0.15
SSBP1-201ENST00000265304 EYA4O95677 639 aa15.95■□□□□ 0.14
SSBP1-201ENST00000265304 CD4P01730 458 aa15.95■□□□□ 0.14
SSBP1-201ENST00000265304 RARRES1P49788 294 aa15.95■□□□□ 0.14
SSBP1-201ENST00000265304 PSMC6P62333 389 aa15.95■□□□□ 0.14
SSBP1-201ENST00000265304 LINC01465Q8N7H1 131 aa15.95■□□□□ 0.14
SSBP1-201ENST00000265304 CALML4Q96GE6 196 aa15.95■□□□□ 0.14
SSBP1-201ENST00000265304 SENP6Q9GZR1 1112 aaPredicted RBP15.95■□□□□ 0.14
SSBP1-201ENST00000265304 DHX33Q9H6R0 707 aaKnown RBP15.95■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms