RNA–Protein interactions for RNA: ENST00000264709.7

DNMT3A-201, Transcript of DNA methyltransferase 3 alpha, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene DNMT3A, Length 9,501 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-201ENST00000264709 NCAPHQ15003 741 aa12.57□□□□□ -0.4
DNMT3A-201ENST00000264709 FNBP1Q96RU3 617 aa12.57□□□□□ -0.4
DNMT3A-201ENST00000264709 DDX25Q9UHL0 483 aaKnown RBP12.57□□□□□ -0.4
DNMT3A-201ENST00000264709 PITPNM2Q9BZ72 1349 aa12.57□□□□□ -0.4
DNMT3A-201ENST00000264709 KRT14P02533 472 aa12.57□□□□□ -0.4
DNMT3A-201ENST00000264709 STAT4Q14765 748 aa12.57□□□□□ -0.4
DNMT3A-201ENST00000264709 NAALADL2Q58DX5 795 aa12.57□□□□□ -0.4
DNMT3A-201ENST00000264709 SYT2Q8N9I0 419 aaPredicted RBP12.57□□□□□ -0.4
DNMT3A-201ENST00000264709 LRCH1Q9Y2L9 728 aa12.57□□□□□ -0.4
DNMT3A-201ENST00000264709 TEX33O43247 280 aa12.57□□□□□ -0.4
DNMT3A-201ENST00000264709 HSPA8P11142 646 aaKnown RBP12.57□□□□□ -0.4
DNMT3A-201ENST00000264709 ACTN1P12814 892 aa12.57□□□□□ -0.4
DNMT3A-201ENST00000264709 TPD52P55327 224 aaPredicted RBP12.57□□□□□ -0.4
DNMT3A-201ENST00000264709 EDRF1Q3B7T1 1238 aa12.57□□□□□ -0.4
DNMT3A-201ENST00000264709 RABL6Q3YEC7 729 aaPredicted RBP12.57□□□□□ -0.4
DNMT3A-201ENST00000264709 RARS2Q5T160 578 aaKnown RBP12.57□□□□□ -0.4
DNMT3A-201ENST00000264709 KRT26Q7Z3Y9 468 aa12.57□□□□□ -0.4
DNMT3A-201ENST00000264709 FAM178BQ8IXR5 827 aa12.57□□□□□ -0.4
DNMT3A-201ENST00000264709 GIMAP8Q8ND71 665 aaPredicted RBP12.57□□□□□ -0.4
DNMT3A-201ENST00000264709 TRAIPQ9BWF2 469 aa12.57□□□□□ -0.4
DNMT3A-201ENST00000264709 FBXO2Q9UK22 296 aaPredicted RBP12.57□□□□□ -0.4
DNMT3A-201ENST00000264709 SHOX2O60902 331 aaPredicted RBP12.57□□□□□ -0.4
DNMT3A-201ENST00000264709 TMCC1O94876 653 aa12.57□□□□□ -0.4
DNMT3A-201ENST00000264709 RAD23BP54727 409 aa12.57□□□□□ -0.4
DNMT3A-201ENST00000264709 MTF1Q14872 753 aa12.57□□□□□ -0.4
DNMT3A-201ENST00000264709 FAM133AQ8N9E0 248 aa12.57□□□□□ -0.4
DNMT3A-201ENST00000264709 OVOS2A0A0J9YW53 1432 aa12.57□□□□□ -0.4
DNMT3A-201ENST00000264709 OVOS2Q6IE36 1432 aa12.57□□□□□ -0.4
DNMT3A-201ENST00000264709 RHOBTB3O94955 611 aa12.57□□□□□ -0.4
DNMT3A-201ENST00000264709 MARK3P27448 753 aa12.57□□□□□ -0.4
DNMT3A-201ENST00000264709 COPS2P61201 443 aa12.57□□□□□ -0.4
DNMT3A-201ENST00000264709 ASPHQ12797 758 aa12.57□□□□□ -0.4
DNMT3A-201ENST00000264709 KRT5P13647 590 aa12.57□□□□□ -0.4
DNMT3A-201ENST00000264709 KLHL38Q2WGJ6 581 aa12.57□□□□□ -0.4
DNMT3A-201ENST00000264709 PCGF5Q86SE9 256 aa12.57□□□□□ -0.4
DNMT3A-201ENST00000264709 ADSSL1Q8N142 457 aa12.57□□□□□ -0.4
DNMT3A-201ENST00000264709 WNT8AQ9H1J5 351 aa12.57□□□□□ -0.4
DNMT3A-201ENST00000264709 CROCCQ5TZA2 2017 aa12.57□□□□□ -0.4
DNMT3A-201ENST00000264709 DIAPH2O60879 1101 aa12.57□□□□□ -0.4
DNMT3A-201ENST00000264709 CCDC28BQ9BUN5 200 aa12.57□□□□□ -0.4
DNMT3A-201ENST00000264709 FAM237AA0A1B0GTK4 181 aa12.56□□□□□ -0.4
DNMT3A-201ENST00000264709 PRCPP42785 496 aa12.56□□□□□ -0.4
DNMT3A-201ENST00000264709 ANO5Q75V66 913 aa12.56□□□□□ -0.4
DNMT3A-201ENST00000264709 MYCT1Q8N699 235 aa12.56□□□□□ -0.4
DNMT3A-201ENST00000264709 ZBTB9Q96C00 473 aa12.56□□□□□ -0.4
DNMT3A-201ENST00000264709 PAPOLBQ9NRJ5 636 aaKnown RBP12.56□□□□□ -0.4
DNMT3A-201ENST00000264709 POTEFA5A3E0 1075 aa12.56□□□□□ -0.4
DNMT3A-201ENST00000264709 POTEIP0CG38 1075 aa12.56□□□□□ -0.4
DNMT3A-201ENST00000264709 RFC1P35251 1148 aaPredicted RBP12.56□□□□□ -0.4
DNMT3A-201ENST00000264709 POTEEQ6S8J3 1075 aa12.56□□□□□ -0.4
DNMT3A-201ENST00000264709 USP38Q8NB14 1042 aa12.56□□□□□ -0.4
DNMT3A-201ENST00000264709 DCLRE1BQ9H816 532 aa12.56□□□□□ -0.4
DNMT3A-201ENST00000264709 NUMA1Q14980 2115 aa12.56□□□□□ -0.4
DNMT3A-201ENST00000264709 TEDDM1Q5T9Z0 273 aa12.56□□□□□ -0.4
DNMT3A-201ENST00000264709 HIC2Q96JB3 615 aa12.56□□□□□ -0.4
DNMT3A-201ENST00000264709 C15orf41Q9Y2V0 281 aa12.56□□□□□ -0.4
DNMT3A-201ENST00000264709 RMDN2Q96LZ7 410 aa12.56□□□□□ -0.4
DNMT3A-201ENST00000264709 KLRF2D3W0D1 207 aa12.56□□□□□ -0.4
DNMT3A-201ENST00000264709 TTI1O43156 1089 aa12.56□□□□□ -0.4
DNMT3A-201ENST00000264709 TBX2Q13207 712 aaPredicted RBP12.56□□□□□ -0.4
DNMT3A-201ENST00000264709 LAMB3Q13751 1172 aa12.56□□□□□ -0.4
DNMT3A-201ENST00000264709 CYLC2Q14093 348 aaPredicted RBP12.56□□□□□ -0.4
DNMT3A-201ENST00000264709 DNAL1Q4LDG9 190 aa12.56□□□□□ -0.4
DNMT3A-201ENST00000264709 CD302Q8IX05 232 aa12.56□□□□□ -0.4
DNMT3A-201ENST00000264709 IRAK4Q9NWZ3 460 aa12.56□□□□□ -0.4
DNMT3A-201ENST00000264709 AIPL1Q9NZN9 384 aa12.56□□□□□ -0.4
DNMT3A-201ENST00000264709 PNPLA7Q6ZV29 1317 aa12.55□□□□□ -0.4
DNMT3A-201ENST00000264709 FAM47DPA6NHR8 397 aa12.55□□□□□ -0.4
DNMT3A-201ENST00000264709 SNF8Q96H20 258 aa12.55□□□□□ -0.4
DNMT3A-201ENST00000264709 MSH2P43246 934 aa12.55□□□□□ -0.4
DNMT3A-201ENST00000264709 MFAP3P55082 362 aa12.55□□□□□ -0.4
DNMT3A-201ENST00000264709 NAB2Q15742 525 aa12.55□□□□□ -0.4
DNMT3A-201ENST00000264709 MCF2L2Q86YR7 1114 aa12.55□□□□□ -0.4
DNMT3A-201ENST00000264709 MIEF2Q96C03 454 aa12.55□□□□□ -0.4
DNMT3A-201ENST00000264709 CDCA7Q9BWT1 371 aaPredicted RBP12.55□□□□□ -0.4
DNMT3A-201ENST00000264709 PABPC3Q9H361 631 aaKnown RBP12.55□□□□□ -0.4
DNMT3A-201ENST00000264709 IFNB1P01574 187 aa12.55□□□□□ -0.4
DNMT3A-201ENST00000264709 POTEAQ6S8J7 498 aa12.55□□□□□ -0.4
DNMT3A-201ENST00000264709 DYMQ7RTS9 669 aa12.55□□□□□ -0.4
DNMT3A-201ENST00000264709 CENPTQ96BT3 561 aa12.55□□□□□ -0.4
DNMT3A-201ENST00000264709 ANKRD65E5RJM6 399 aa12.55□□□□□ -0.4
DNMT3A-201ENST00000264709 KRT38O76015 456 aa12.55□□□□□ -0.4
DNMT3A-201ENST00000264709 BAG2O95816 211 aa12.55□□□□□ -0.4
DNMT3A-201ENST00000264709 KIRREL3Q8IZU9 778 aa12.55□□□□□ -0.4
DNMT3A-201ENST00000264709 ZNF594Q96JF6 807 aaPredicted RBP12.55□□□□□ -0.4
DNMT3A-201ENST00000264709 SALL1Q9NSC2 1324 aa12.55□□□□□ -0.4
DNMT3A-201ENST00000264709 TECPR2O15040 1411 aa12.55□□□□□ -0.4
DNMT3A-201ENST00000264709 PFKFB3Q16875 520 aaPredicted RBP12.55□□□□□ -0.4
DNMT3A-201ENST00000264709 SESTD1Q86VW0 696 aa12.55□□□□□ -0.4
DNMT3A-201ENST00000264709 PFDN4Q9NQP4 134 aa12.55□□□□□ -0.4
DNMT3A-201ENST00000264709 SNUPNO95149 360 aaKnown RBP12.55□□□□□ -0.4
DNMT3A-201ENST00000264709 EPC1Q9H2F5 836 aa12.55□□□□□ -0.4
DNMT3A-201ENST00000264709 HGSO14964 777 aaPredicted RBP12.55□□□□□ -0.4
DNMT3A-201ENST00000264709 SLC16A3O15427 465 aaKnown RBP12.55□□□□□ -0.4
DNMT3A-201ENST00000264709 ACSL3O95573 720 aa12.55□□□□□ -0.4
DNMT3A-201ENST00000264709 FXR1P51114 621 aaKnown RBP eCLIP12.55□□□□□ -0.4
DNMT3A-201ENST00000264709 SUCLA2Q9P2R7 463 aaPredicted RBP12.55□□□□□ -0.4
DNMT3A-201ENST00000264709 TECP42680 631 aa12.55□□□□□ -0.4
DNMT3A-201ENST00000264709 SLC1A4P43007 532 aa12.55□□□□□ -0.4
DNMT3A-201ENST00000264709 HSPA13P48723 471 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms