RNA–Protein interactions for RNA: ENST00000261517.9

VPS13C-202, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13C, Length 13,400 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-202ENST00000261517 CFAP69A5D8W1 941 aa4.65□□□□□ -1.67
VPS13C-202ENST00000261517 RIOK3O14730 519 aaKnown RBP4.65□□□□□ -1.67
VPS13C-202ENST00000261517 PPP1R12AO14974 1030 aaPredicted RBP4.65□□□□□ -1.67
VPS13C-202ENST00000261517 PLA2G4BP0C869 781 aa4.65□□□□□ -1.67
VPS13C-202ENST00000261517 INPP5BP32019 993 aa4.65□□□□□ -1.67
VPS13C-202ENST00000261517 DDIT3P35638 169 aa4.65□□□□□ -1.67
VPS13C-202ENST00000261517 ZNF135P52742 658 aaPredicted RBP4.65□□□□□ -1.67
VPS13C-202ENST00000261517 RESTQ13127 1097 aa4.65□□□□□ -1.67
VPS13C-202ENST00000261517 GADL1Q6ZQY3 521 aa4.65□□□□□ -1.67
VPS13C-202ENST00000261517 SDCCAG8Q86SQ7 713 aaPredicted RBP4.65□□□□□ -1.67
VPS13C-202ENST00000261517 VPS39Q96JC1 886 aa4.65□□□□□ -1.67
VPS13C-202ENST00000261517 TSSK1BQ9BXA7 367 aa4.65□□□□□ -1.67
VPS13C-202ENST00000261517 SALL1Q9NSC2 1324 aa4.65□□□□□ -1.67
VPS13C-202ENST00000261517 ERICH4A6NGS2 130 aa4.65□□□□□ -1.67
VPS13C-202ENST00000261517 CYP21A2P08686 494 aa4.65□□□□□ -1.67
VPS13C-202ENST00000261517 ACBD5Q5T8D3 534 aaPredicted RBP4.65□□□□□ -1.67
VPS13C-202ENST00000261517 DNAJC24Q6P3W2 148 aa4.65□□□□□ -1.67
VPS13C-202ENST00000261517 MRPL4Q9BYD3 311 aaKnown RBP4.65□□□□□ -1.67
VPS13C-202ENST00000261517 FAM124BQ9H5Z6 455 aaPredicted RBP4.65□□□□□ -1.67
VPS13C-202ENST00000261517 ACAD9Q9H845 621 aa4.65□□□□□ -1.67
VPS13C-202ENST00000261517 ZNF609O15014 1411 aa4.65□□□□□ -1.67
VPS13C-202ENST00000261517 ECEL1O95672 775 aa4.65□□□□□ -1.67
VPS13C-202ENST00000261517 SLC26A2P50443 739 aa4.65□□□□□ -1.67
VPS13C-202ENST00000261517 TPD52P55327 224 aaPredicted RBP4.65□□□□□ -1.67
VPS13C-202ENST00000261517 RNF207Q6ZRF8 634 aa4.65□□□□□ -1.67
VPS13C-202ENST00000261517 SCG3Q8WXD2 468 aaKnown RBP4.65□□□□□ -1.67
VPS13C-202ENST00000261517 CDK5RAP1Q96SZ6 601 aaKnown RBP4.65□□□□□ -1.67
VPS13C-202ENST00000261517 SMARCAL1Q9NZC9 954 aa4.65□□□□□ -1.67
VPS13C-202ENST00000261517 KIAA1024Q9UPX6 916 aa4.65□□□□□ -1.67
VPS13C-202ENST00000261517 P4HBP07237 508 aaKnown RBP4.65□□□□□ -1.67
VPS13C-202ENST00000261517 TRAPPC11Q7Z392 1133 aa4.65□□□□□ -1.67
VPS13C-202ENST00000261517 KIAA0825Q8IV33 1275 aa4.65□□□□□ -1.67
VPS13C-202ENST00000261517 XXYLT1Q8NBI6 393 aa4.65□□□□□ -1.67
VPS13C-202ENST00000261517 MED10Q9BTT4 135 aa4.65□□□□□ -1.67
VPS13C-202ENST00000261517 MRIQ9BWK5 157 aa4.65□□□□□ -1.67
VPS13C-202ENST00000261517 GCNT4Q9P109 453 aa4.65□□□□□ -1.67
VPS13C-202ENST00000261517 DDX41Q9UJV9 622 aaKnown RBP4.65□□□□□ -1.67
VPS13C-202ENST00000261517 M0R2C6 588 aa4.65□□□□□ -1.67
VPS13C-202ENST00000261517 STX2P32856 288 aa4.65□□□□□ -1.67
VPS13C-202ENST00000261517 TECP42680 631 aa4.65□□□□□ -1.67
VPS13C-202ENST00000261517 CRKP46108 304 aa4.65□□□□□ -1.67
VPS13C-202ENST00000261517 NBPF9Q3BBW0 867 aa4.65□□□□□ -1.67
VPS13C-202ENST00000261517 USP13Q92995 863 aaPredicted RBP4.65□□□□□ -1.67
VPS13C-202ENST00000261517 GRAMD1AQ96CP6 724 aa4.65□□□□□ -1.67
VPS13C-202ENST00000261517 TCEANC2Q96MN5 208 aa4.65□□□□□ -1.67
VPS13C-202ENST00000261517 LRRC37BQ96QE4 947 aa4.65□□□□□ -1.67
VPS13C-202ENST00000261517 VPS9D1Q9Y2B5 631 aa4.65□□□□□ -1.67
VPS13C-202ENST00000261517 LRRIQ4A6NIV6 560 aa4.65□□□□□ -1.67
VPS13C-202ENST00000261517 PDXKO00764 312 aa4.65□□□□□ -1.67
VPS13C-202ENST00000261517 RBM10P98175 930 aaKnown RBP4.65□□□□□ -1.67
VPS13C-202ENST00000261517 KLHL38Q2WGJ6 581 aa4.65□□□□□ -1.67
VPS13C-202ENST00000261517 KRT71Q3SY84 523 aa4.65□□□□□ -1.67
VPS13C-202ENST00000261517 TMEM35BQ8NCS4 154 aa4.65□□□□□ -1.67
VPS13C-202ENST00000261517 LTN1O94822 1766 aa4.64□□□□□ -1.67
VPS13C-202ENST00000261517 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP4.64□□□□□ -1.67
VPS13C-202ENST00000261517 KDM1AO60341 852 aa4.64□□□□□ -1.67
VPS13C-202ENST00000261517 SRGAP2CP0DJJ0 459 aa4.64□□□□□ -1.67
VPS13C-202ENST00000261517 GARTP22102 1010 aa4.64□□□□□ -1.67
VPS13C-202ENST00000261517 TSPY1Q01534 308 aa4.64□□□□□ -1.67
VPS13C-202ENST00000261517 DHX34Q14147 1143 aaKnown RBP4.64□□□□□ -1.67
VPS13C-202ENST00000261517 KRT24Q2M2I5 525 aa4.64□□□□□ -1.67
VPS13C-202ENST00000261517 CHST3Q7LGC8 479 aa4.64□□□□□ -1.67
VPS13C-202ENST00000261517 ZNF34Q8IZ26 560 aa4.64□□□□□ -1.67
VPS13C-202ENST00000261517 TBCKQ8TEA7 893 aa4.64□□□□□ -1.67
VPS13C-202ENST00000261517 U2AF1L4Q8WU68 220 aaKnown RBP4.64□□□□□ -1.67
VPS13C-202ENST00000261517 RIT2Q99578 217 aa4.64□□□□□ -1.67
VPS13C-202ENST00000261517 SEPT9Q9UHD8 586 aaPredicted RBP4.64□□□□□ -1.67
VPS13C-202ENST00000261517 LRFN2Q9ULH4 789 aa4.64□□□□□ -1.67
VPS13C-202ENST00000261517 TRIM33Q9UPN9 1127 aa4.64□□□□□ -1.67
VPS13C-202ENST00000261517 SPATA31A1Q5TZJ5 1347 aa4.64□□□□□ -1.67
VPS13C-202ENST00000261517 RRN3P2A6NIE6 340 aa4.64□□□□□ -1.67
VPS13C-202ENST00000261517 NKRFO15226 690 aaKnown RBP eCLIP4.64□□□□□ -1.67
VPS13C-202ENST00000261517 INHBAP08476 426 aa4.64□□□□□ -1.67
VPS13C-202ENST00000261517 ERFEQ4G0M1 354 aa4.64□□□□□ -1.67
VPS13C-202ENST00000261517 TYW1BQ6NUM6 668 aa4.64□□□□□ -1.67
VPS13C-202ENST00000261517 METTL13Q8N6R0 699 aa4.64□□□□□ -1.67
VPS13C-202ENST00000261517 EMILIN3Q9NT22 766 aa4.64□□□□□ -1.67
VPS13C-202ENST00000261517 VPS18Q9P253 973 aa4.64□□□□□ -1.67
VPS13C-202ENST00000261517 STK39Q9UEW8 545 aa4.64□□□□□ -1.67
VPS13C-202ENST00000261517 MAPTP10636 758 aaKnown RBP4.64□□□□□ -1.67
VPS13C-202ENST00000261517 STAT3P40763 770 aa4.64□□□□□ -1.67
VPS13C-202ENST00000261517 PSMC4P43686 418 aa4.64□□□□□ -1.67
VPS13C-202ENST00000261517 PPP2R5CQ13362 524 aa4.64□□□□□ -1.67
VPS13C-202ENST00000261517 SLC10A5Q5PT55 438 aa4.64□□□□□ -1.67
VPS13C-202ENST00000261517 CENPUQ71F23 418 aa4.64□□□□□ -1.67
VPS13C-202ENST00000261517 ARHGAP18Q8N392 663 aa4.64□□□□□ -1.67
VPS13C-202ENST00000261517 POP5Q969H6 163 aaKnown RBP4.64□□□□□ -1.67
VPS13C-202ENST00000261517 SLC10A4Q96EP9 437 aa4.64□□□□□ -1.67
VPS13C-202ENST00000261517 PAIP2Q9BPZ3 127 aaKnown RBP4.64□□□□□ -1.67
VPS13C-202ENST00000261517 PCDHB4Q9Y5E5 795 aa4.64□□□□□ -1.67
VPS13C-202ENST00000261517 ORC6Q9Y5N6 252 aa4.64□□□□□ -1.67
VPS13C-202ENST00000261517 COL14A1Q05707 1796 aaKnown RBP4.64□□□□□ -1.67
VPS13C-202ENST00000261517 ATRNO75882 1429 aa4.64□□□□□ -1.67
VPS13C-202ENST00000261517 TMCC1O94876 653 aa4.64□□□□□ -1.67
VPS13C-202ENST00000261517 CSF1RP07333 972 aa4.64□□□□□ -1.67
VPS13C-202ENST00000261517 KRT15P19012 456 aa4.64□□□□□ -1.67
VPS13C-202ENST00000261517 CTNNA1P35221 906 aaKnown RBP4.64□□□□□ -1.67
VPS13C-202ENST00000261517 ADCY8P40145 1251 aa4.64□□□□□ -1.67
VPS13C-202ENST00000261517 ARL1P40616 181 aaPredicted RBP4.64□□□□□ -1.67
VPS13C-202ENST00000261517 PNPLA4P41247 253 aa4.64□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms