RNA–Protein interactions for RNA: ENST00000257604.9

TRAFD1-201, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

APPRIS P2 TSL 2 BASIC

Gene TRAFD1, Length 3,178 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-201ENST00000257604 REXO2Q9Y3B8 237 aaKnown RBP16.1■□□□□ 0.17
TRAFD1-201ENST00000257604 LRRC37AA6NMS7 1700 aa16.1■□□□□ 0.17
TRAFD1-201ENST00000257604 ATRNL1Q5VV63 1379 aa16.1■□□□□ 0.17
TRAFD1-201ENST00000257604 NRXN2Q9P2S2 1712 aa16.1■□□□□ 0.17
TRAFD1-201ENST00000257604 TISP43B9A030 160 aa16.1■□□□□ 0.17
TRAFD1-201ENST00000257604 RPS6P62753 249 aaKnown RBP16.1■□□□□ 0.17
TRAFD1-201ENST00000257604 WDR78Q5VTH9 848 aa16.1■□□□□ 0.17
TRAFD1-201ENST00000257604 MIER3Q7Z3K6 550 aa16.1■□□□□ 0.17
TRAFD1-201ENST00000257604 PRPF38AQ8NAV1 312 aaKnown RBP16.1■□□□□ 0.17
TRAFD1-201ENST00000257604 NOA1Q8NC60 698 aaKnown RBP16.1■□□□□ 0.17
TRAFD1-201ENST00000257604 SLITRK3O94933 977 aa16.1■□□□□ 0.17
TRAFD1-201ENST00000257604 CYLC1P35663 651 aaPredicted RBP16.1■□□□□ 0.17
TRAFD1-201ENST00000257604 VSNL1P62760 191 aa16.1■□□□□ 0.17
TRAFD1-201ENST00000257604 TRIM14Q14142 442 aa16.1■□□□□ 0.17
TRAFD1-201ENST00000257604 GJB7Q6PEY0 223 aa16.1■□□□□ 0.17
TRAFD1-201ENST00000257604 FAM133AQ8N9E0 248 aa16.1■□□□□ 0.17
TRAFD1-201ENST00000257604 TRPM4Q8TD43 1214 aa16.1■□□□□ 0.17
TRAFD1-201ENST00000257604 KCNH7Q9NS40 1196 aa16.1■□□□□ 0.17
TRAFD1-201ENST00000257604 SEPT11Q9NVA2 429 aaKnown RBP16.1■□□□□ 0.17
TRAFD1-201ENST00000257604 GGA3Q9NZ52 723 aa16.1■□□□□ 0.17
TRAFD1-201ENST00000257604 RIPK3Q9Y572 518 aa16.1■□□□□ 0.17
TRAFD1-201ENST00000257604 CCDC151A5D8V7 595 aa16.09■□□□□ 0.17
TRAFD1-201ENST00000257604 ARHGEF35A5YM69 484 aa16.09■□□□□ 0.17
TRAFD1-201ENST00000257604 RBAK-RBAKDNI3L0D1 243 aa16.09■□□□□ 0.17
TRAFD1-201ENST00000257604 ATP8B1O43520 1251 aa16.09■□□□□ 0.17
TRAFD1-201ENST00000257604 ITGB5P18084 799 aa16.09■□□□□ 0.17
TRAFD1-201ENST00000257604 VCAM1P19320 739 aa16.09■□□□□ 0.17
TRAFD1-201ENST00000257604 SLC9A1P19634 815 aa16.09■□□□□ 0.17
TRAFD1-201ENST00000257604 SOX10P56693 466 aa16.09■□□□□ 0.17
TRAFD1-201ENST00000257604 BEND6Q5SZJ8 279 aaPredicted RBP16.09■□□□□ 0.17
TRAFD1-201ENST00000257604 LRRC55Q6ZSA7 311 aa16.09■□□□□ 0.17
TRAFD1-201ENST00000257604 OTOP1Q7RTM1 612 aa16.09■□□□□ 0.17
TRAFD1-201ENST00000257604 NAP1L4Q99733 375 aaKnown RBP16.09■□□□□ 0.17
TRAFD1-201ENST00000257604 ZNF185O15231 689 aa16.09■□□□□ 0.17
TRAFD1-201ENST00000257604 EEPD1Q7L9B9 569 aa16.09■□□□□ 0.17
TRAFD1-201ENST00000257604 FAM20AQ96MK3 541 aa16.09■□□□□ 0.17
TRAFD1-201ENST00000257604 SPAG5Q96R06 1193 aa16.09■□□□□ 0.17
TRAFD1-201ENST00000257604 RMDN3Q96TC7 470 aa16.09■□□□□ 0.17
TRAFD1-201ENST00000257604 FEM1BQ9UK73 627 aa16.09■□□□□ 0.17
TRAFD1-201ENST00000257604 ITIH6Q6UXX5 1313 aa16.09■□□□□ 0.17
TRAFD1-201ENST00000257604 TMCO5BA8MYB1 307 aa16.08■□□□□ 0.17
TRAFD1-201ENST00000257604 HERVK_113P62684 666 aa16.08■□□□□ 0.17
TRAFD1-201ENST00000257604 ZBED6P86452 979 aa16.08■□□□□ 0.17
TRAFD1-201ENST00000257604 LRRC63Q05C16 580 aa16.08■□□□□ 0.17
TRAFD1-201ENST00000257604 KCNH2Q12809 1159 aa16.08■□□□□ 0.17
TRAFD1-201ENST00000257604 ORC2Q13416 577 aaPredicted RBP16.08■□□□□ 0.17
TRAFD1-201ENST00000257604 TNFAIP1Q13829 316 aa16.08■□□□□ 0.17
TRAFD1-201ENST00000257604 TTC19Q6DKK2 380 aaPredicted RBP16.08■□□□□ 0.17
TRAFD1-201ENST00000257604 RINT1Q6NUQ1 792 aa16.08■□□□□ 0.17
TRAFD1-201ENST00000257604 CCDC51Q96ER9 411 aa16.08■□□□□ 0.17
TRAFD1-201ENST00000257604 NAPGQ99747 312 aaPredicted RBP16.08■□□□□ 0.17
TRAFD1-201ENST00000257604 IFIH1Q9BYX4 1025 aaKnown RBP16.08■□□□□ 0.17
TRAFD1-201ENST00000257604 GPRC5CQ9NQ84 441 aa16.08■□□□□ 0.17
TRAFD1-201ENST00000257604 SMARCAL1Q9NZC9 954 aa16.08■□□□□ 0.17
TRAFD1-201ENST00000257604 VAV3Q9UKW4 847 aa16.08■□□□□ 0.17
TRAFD1-201ENST00000257604 PRELPP51888 382 aa16.08■□□□□ 0.16
TRAFD1-201ENST00000257604 KIF5AQ12840 1032 aa16.08■□□□□ 0.16
TRAFD1-201ENST00000257604 TTLL12Q14166 644 aaPredicted RBP16.08■□□□□ 0.16
TRAFD1-201ENST00000257604 ARHGEF16Q5VV41 709 aa16.08■□□□□ 0.16
TRAFD1-201ENST00000257604 FAM178BQ8IXR5 827 aa16.08■□□□□ 0.16
TRAFD1-201ENST00000257604 CNKSR2Q8WXI2 1034 aa16.08■□□□□ 0.16
TRAFD1-201ENST00000257604 ARMCX3Q9UH62 379 aaPredicted RBP16.08■□□□□ 0.16
TRAFD1-201ENST00000257604 CDC23Q9UJX2 597 aa16.08■□□□□ 0.16
TRAFD1-201ENST00000257604 USP20Q9Y2K6 914 aa16.08■□□□□ 0.16
TRAFD1-201ENST00000257604 ZNF541Q9H0D2 1346 aa16.08■□□□□ 0.16
TRAFD1-201ENST00000257604 IGLV3-22A0A075B6J6 115 aa16.08■□□□□ 0.16
TRAFD1-201ENST00000257604 MOCS3O95396 460 aa16.08■□□□□ 0.16
TRAFD1-201ENST00000257604 NPEPPSP55786 919 aa16.08■□□□□ 0.16
TRAFD1-201ENST00000257604 BAATQ14032 418 aaPredicted RBP16.08■□□□□ 0.16
TRAFD1-201ENST00000257604 PLA2G4FQ68DD2 849 aa16.08■□□□□ 0.16
TRAFD1-201ENST00000257604 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.08■□□□□ 0.16
TRAFD1-201ENST00000257604 TEKT3Q9BXF9 490 aa16.08■□□□□ 0.16
TRAFD1-201ENST00000257604 RASSF4Q9H2L5 321 aa16.08■□□□□ 0.16
TRAFD1-201ENST00000257604 ATP1A1P05023 1023 aaKnown RBP16.07■□□□□ 0.16
TRAFD1-201ENST00000257604 TRIM49P0CI25 452 aa16.07■□□□□ 0.16
TRAFD1-201ENST00000257604 TRIM49CP0CI26 452 aa16.07■□□□□ 0.16
TRAFD1-201ENST00000257604 DNAJC21Q5F1R6 531 aaKnown RBP16.07■□□□□ 0.16
TRAFD1-201ENST00000257604 BTNL9Q6UXG8 535 aa16.07■□□□□ 0.16
TRAFD1-201ENST00000257604 SYT2Q8N9I0 419 aaPredicted RBP16.07■□□□□ 0.16
TRAFD1-201ENST00000257604 ARHGAP20Q9P2F6 1191 aa16.07■□□□□ 0.16
TRAFD1-201ENST00000257604 ADAMTS1Q9UHI8 967 aa16.07■□□□□ 0.16
TRAFD1-201ENST00000257604 ATP9AO75110 1047 aa16.07■□□□□ 0.16
TRAFD1-201ENST00000257604 ARHGAP25P42331 645 aa16.07■□□□□ 0.16
TRAFD1-201ENST00000257604 Q4G0T1 1027 aa16.07■□□□□ 0.16
TRAFD1-201ENST00000257604 SNRNP48Q6IEG0 339 aaKnown RBP16.07■□□□□ 0.16
TRAFD1-201ENST00000257604 KIFC3Q9BVG8 833 aa16.07■□□□□ 0.16
TRAFD1-201ENST00000257604 A0A1W2PQC6 194 aa16.06■□□□□ 0.16
TRAFD1-201ENST00000257604 MAP2K7O14733 419 aa16.06■□□□□ 0.16
TRAFD1-201ENST00000257604 NCK2O43639 380 aa16.06■□□□□ 0.16
TRAFD1-201ENST00000257604 NPM3O75607 178 aaKnown RBP16.06■□□□□ 0.16
TRAFD1-201ENST00000257604 KIF11P52732 1056 aa16.06■□□□□ 0.16
TRAFD1-201ENST00000257604 MTMR1Q13613 665 aa16.06■□□□□ 0.16
TRAFD1-201ENST00000257604 LEKR1Q6ZMV7 388 aa16.06■□□□□ 0.16
TRAFD1-201ENST00000257604 HDXQ7Z353 690 aa16.06■□□□□ 0.16
TRAFD1-201ENST00000257604 EXOC4Q96A65 974 aa16.06■□□□□ 0.16
TRAFD1-201ENST00000257604 RANBP17Q9H2T7 1088 aaKnown RBP16.06■□□□□ 0.16
TRAFD1-201ENST00000257604 RRP15Q9Y3B9 282 aaKnown RBP16.06■□□□□ 0.16
TRAFD1-201ENST00000257604 CYP3A7-CYP3A51PA0A087WV96 503 aa16.06■□□□□ 0.16
TRAFD1-201ENST00000257604 GOLGA8IPA6NC78 632 aa16.06■□□□□ 0.16
TRAFD1-201ENST00000257604 GOLGA8JA6NMD2 632 aa16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms