RNA–Protein interactions for RNA: ENST00000257290.9

PDGFRA-201, Transcript of platelet derived growth factor receptor alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFRA, Length 6,576 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-201ENST00000257290 RGS21Q2M5E4 152 aa7.25□□□□□ -1.25
PDGFRA-201ENST00000257290 ZNF713Q8N859 430 aaPredicted RBP7.25□□□□□ -1.25
PDGFRA-201ENST00000257290 DDI1Q8WTU0 396 aa7.25□□□□□ -1.25
PDGFRA-201ENST00000257290 KCNF1Q9H3M0 494 aa7.25□□□□□ -1.25
PDGFRA-201ENST00000257290 L2HGDHQ9H9P8 463 aa7.25□□□□□ -1.25
PDGFRA-201ENST00000257290 ARHGEF38Q9NXL2 777 aa7.25□□□□□ -1.25
PDGFRA-201ENST00000257290 NDE1Q9NXR1 346 aa7.25□□□□□ -1.25
PDGFRA-201ENST00000257290 SUGT1Q9Y2Z0 365 aa7.25□□□□□ -1.25
PDGFRA-201ENST00000257290 MRPL11Q9Y3B7 192 aaKnown RBP7.25□□□□□ -1.25
PDGFRA-201ENST00000257290 CALB1P05937 261 aa7.25□□□□□ -1.25
PDGFRA-201ENST00000257290 GHRP10912 638 aa7.25□□□□□ -1.25
PDGFRA-201ENST00000257290 IDO1P14902 403 aa7.25□□□□□ -1.25
PDGFRA-201ENST00000257290 SERPINB6P35237 376 aa7.25□□□□□ -1.25
PDGFRA-201ENST00000257290 CUL1Q13616 776 aa7.25□□□□□ -1.25
PDGFRA-201ENST00000257290 RPS6KC1Q96S38 1066 aa7.25□□□□□ -1.25
PDGFRA-201ENST00000257290 SLF1Q9BQI6 1058 aa7.25□□□□□ -1.25
PDGFRA-201ENST00000257290 IPPQ9Y573 584 aa7.25□□□□□ -1.25
PDGFRA-201ENST00000257290 ANKARQ7Z5J8 1434 aa7.25□□□□□ -1.25
PDGFRA-201ENST00000257290 SMNDC1O75940 238 aaKnown RBP eCLIP7.24□□□□□ -1.25
PDGFRA-201ENST00000257290 MCF2P10911 925 aa7.24□□□□□ -1.25
PDGFRA-201ENST00000257290 ITGAXP20702 1163 aa7.24□□□□□ -1.25
PDGFRA-201ENST00000257290 GRIN1Q05586 938 aa7.24□□□□□ -1.25
PDGFRA-201ENST00000257290 AGGF1Q8N302 714 aaeCLIP7.24□□□□□ -1.25
PDGFRA-201ENST00000257290 KCTD4Q8WVF5 259 aa7.24□□□□□ -1.25
PDGFRA-201ENST00000257290 SPIRE2Q8WWL2 714 aa7.24□□□□□ -1.25
PDGFRA-201ENST00000257290 TUBGCP5Q96RT8 1024 aa7.24□□□□□ -1.25
PDGFRA-201ENST00000257290 USP26Q9BXU7 913 aa7.24□□□□□ -1.25
PDGFRA-201ENST00000257290 PASKQ96RG2 1323 aa7.24□□□□□ -1.25
PDGFRA-201ENST00000257290 PALM3A6NDB9 673 aaPredicted RBP7.24□□□□□ -1.25
PDGFRA-201ENST00000257290 ZNF839A8K0R7 811 aa7.24□□□□□ -1.25
PDGFRA-201ENST00000257290 GOLGA8SH3BPF8 625 aa7.24□□□□□ -1.25
PDGFRA-201ENST00000257290 PYGMP11217 842 aa7.24□□□□□ -1.25
PDGFRA-201ENST00000257290 CDH3P22223 829 aa7.24□□□□□ -1.25
PDGFRA-201ENST00000257290 CHRNA2Q15822 529 aa7.24□□□□□ -1.25
PDGFRA-201ENST00000257290 GEN1Q17RS7 908 aa7.24□□□□□ -1.25
PDGFRA-201ENST00000257290 PAWRQ96IZ0 340 aaKnown RBP7.24□□□□□ -1.25
PDGFRA-201ENST00000257290 ACAP3Q96P50 834 aa7.24□□□□□ -1.25
PDGFRA-201ENST00000257290 PLGRKTQ9HBL7 147 aa7.24□□□□□ -1.25
PDGFRA-201ENST00000257290 IL1RAPL2Q9NP60 686 aa7.24□□□□□ -1.25
PDGFRA-201ENST00000257290 RTL1A6NKG5 1358 aa7.24□□□□□ -1.25
PDGFRA-201ENST00000257290 TMEM191CA6NGB0 347 aa7.24□□□□□ -1.25
PDGFRA-201ENST00000257290 ARHGAP42A6NI28 874 aa7.24□□□□□ -1.25
PDGFRA-201ENST00000257290 CCDC169A6NNP5 214 aa7.24□□□□□ -1.25
PDGFRA-201ENST00000257290 H3BQF6 201 aa7.24□□□□□ -1.25
PDGFRA-201ENST00000257290 ASNA1O43681 348 aa7.24□□□□□ -1.25
PDGFRA-201ENST00000257290 STX10O60499 249 aa7.24□□□□□ -1.25
PDGFRA-201ENST00000257290 EPN2O95208 641 aa7.24□□□□□ -1.25
PDGFRA-201ENST00000257290 ASS1P00966 412 aaKnown RBP7.24□□□□□ -1.25
PDGFRA-201ENST00000257290 TMEM191BP0C7N4 346 aa7.24□□□□□ -1.25
PDGFRA-201ENST00000257290 DDIT3P35638 169 aa7.24□□□□□ -1.25
PDGFRA-201ENST00000257290 MDH1P40925 334 aaKnown RBP7.24□□□□□ -1.25
PDGFRA-201ENST00000257290 MTERF2Q49AM1 385 aa7.24□□□□□ -1.25
PDGFRA-201ENST00000257290 C10orf76Q5T2E6 689 aa7.24□□□□□ -1.25
PDGFRA-201ENST00000257290 CNBD1Q8NA66 436 aa7.24□□□□□ -1.25
PDGFRA-201ENST00000257290 GOLM1Q8NBJ4 401 aa7.24□□□□□ -1.25
PDGFRA-201ENST00000257290 XPO4Q9C0E2 1151 aaKnown RBP7.24□□□□□ -1.25
PDGFRA-201ENST00000257290 ETNK1Q9HBU6 452 aa7.24□□□□□ -1.25
PDGFRA-201ENST00000257290 PCDH11XQ9BZA7 1347 aa7.24□□□□□ -1.25
PDGFRA-201ENST00000257290 PCDH11YQ9BZA8 1340 aa7.24□□□□□ -1.25
PDGFRA-201ENST00000257290 CCT8L1PA6NM43 557 aa7.24□□□□□ -1.25
PDGFRA-201ENST00000257290 FAM25AB3EWG3 89 aa7.24□□□□□ -1.25
PDGFRA-201ENST00000257290 FAM25CB3EWG5 89 aa7.24□□□□□ -1.25
PDGFRA-201ENST00000257290 FAM25GB3EWG6 89 aa7.24□□□□□ -1.25
PDGFRA-201ENST00000257290 LSP1P33241 339 aa7.24□□□□□ -1.25
PDGFRA-201ENST00000257290 C16orf72Q14CZ0 275 aa7.24□□□□□ -1.25
PDGFRA-201ENST00000257290 DNAJC14Q6Y2X3 702 aaPredicted RBP7.24□□□□□ -1.25
PDGFRA-201ENST00000257290 B3GNT6Q6ZMB0 384 aa7.24□□□□□ -1.25
PDGFRA-201ENST00000257290 CYFIP2Q96F07 1278 aa7.24□□□□□ -1.25
PDGFRA-201ENST00000257290 HOMER2Q9NSB8 354 aa7.24□□□□□ -1.25
PDGFRA-201ENST00000257290 TRIM10Q9UDY6 481 aa7.24□□□□□ -1.25
PDGFRA-201ENST00000257290 TUBGCP4Q9UGJ1 667 aa7.24□□□□□ -1.25
PDGFRA-201ENST00000257290 APOBEC2Q9Y235 224 aaKnown RBP7.24□□□□□ -1.25
PDGFRA-201ENST00000257290 MAP3K2Q9Y2U5 619 aa7.24□□□□□ -1.25
PDGFRA-201ENST00000257290 DYNC1LI1Q9Y6G9 523 aaKnown RBP7.24□□□□□ -1.25
PDGFRA-201ENST00000257290 ROBO2Q9HCK4 1378 aa7.24□□□□□ -1.25
PDGFRA-201ENST00000257290 CLTCQ00610 1675 aaKnown RBP7.24□□□□□ -1.25
PDGFRA-201ENST00000257290 PPIP5K2O43314 1243 aa7.24□□□□□ -1.25
PDGFRA-201ENST00000257290 STAT6P42226 847 aa7.24□□□□□ -1.25
PDGFRA-201ENST00000257290 ACADVLP49748 655 aa7.24□□□□□ -1.25
PDGFRA-201ENST00000257290 HSPA2P54652 639 aa7.24□□□□□ -1.25
PDGFRA-201ENST00000257290 AP1B1Q10567 949 aa7.24□□□□□ -1.25
PDGFRA-201ENST00000257290 NFE2L1Q14494 772 aa7.24□□□□□ -1.25
PDGFRA-201ENST00000257290 KRT81Q14533 505 aa7.24□□□□□ -1.25
PDGFRA-201ENST00000257290 LSM14AQ8ND56 463 aaKnown RBP7.24□□□□□ -1.25
PDGFRA-201ENST00000257290 ELAC2Q9BQ52 826 aaKnown RBP7.24□□□□□ -1.25
PDGFRA-201ENST00000257290 IMPG2Q9BZV3 1241 aa7.24□□□□□ -1.25
PDGFRA-201ENST00000257290 SPC25Q9HBM1 224 aa7.24□□□□□ -1.25
PDGFRA-201ENST00000257290 TCP11L1Q9NUJ3 509 aa7.24□□□□□ -1.25
PDGFRA-201ENST00000257290 SELENONQ9NZV5 590 aa7.24□□□□□ -1.25
PDGFRA-201ENST00000257290 KIDINS220Q9ULH0 1771 aa7.24□□□□□ -1.25
PDGFRA-201ENST00000257290 F6X3S4 739 aa7.24□□□□□ -1.25
PDGFRA-201ENST00000257290 S100A6P06703 90 aa7.24□□□□□ -1.25
PDGFRA-201ENST00000257290 PLCB3Q01970 1234 aa7.24□□□□□ -1.25
PDGFRA-201ENST00000257290 IRF5Q13568 498 aa7.24□□□□□ -1.25
PDGFRA-201ENST00000257290 MYBPC3Q14896 1274 aa7.24□□□□□ -1.25
PDGFRA-201ENST00000257290 CATSPER1Q8NEC5 780 aa7.24□□□□□ -1.25
PDGFRA-201ENST00000257290 CHMP6Q96FZ7 201 aa7.24□□□□□ -1.25
PDGFRA-201ENST00000257290 SEC16BQ96JE7 1060 aa7.24□□□□□ -1.25
PDGFRA-201ENST00000257290 CEP19Q96LK0 163 aa7.24□□□□□ -1.25
PDGFRA-201ENST00000257290 KCTD5Q9NXV2 234 aa7.24□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms