RNA–Protein interactions for RNA: ENST00000256367.2

TTC9-201, Transcript of tetratricopeptide repeat domain 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TTC9, Length 5,217 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC9-201ENST00000256367 GIMAP8Q8ND71 665 aaPredicted RBP23.79■■□□□ 1.4
TTC9-201ENST00000256367 ZC3H13Q5T200 1668 aaKnown RBP23.79■■□□□ 1.4
TTC9-201ENST00000256367 TDP2O95551 362 aa23.79■■□□□ 1.4
TTC9-201ENST00000256367 ATP1A2P50993 1020 aa23.79■■□□□ 1.4
TTC9-201ENST00000256367 ALKBH5Q6P6C2 394 aaKnown RBP23.79■■□□□ 1.4
TTC9-201ENST00000256367 NEK9Q8TD19 979 aa23.79■■□□□ 1.4
TTC9-201ENST00000256367 FAM167AQ96KS9 214 aa23.79■■□□□ 1.4
TTC9-201ENST00000256367 PFDN4Q9NQP4 134 aa23.79■■□□□ 1.4
TTC9-201ENST00000256367 KIDINS220Q9ULH0 1771 aa23.79■■□□□ 1.4
TTC9-201ENST00000256367 SGK1O00141 431 aa23.79■■□□□ 1.4
TTC9-201ENST00000256367 LDHAP00338 332 aaKnown RBP23.79■■□□□ 1.4
TTC9-201ENST00000256367 NR3C1P04150 777 aa23.79■■□□□ 1.4
TTC9-201ENST00000256367 SBK1Q52WX2 424 aa23.79■■□□□ 1.4
TTC9-201ENST00000256367 STRIP1Q5VSL9 837 aa23.79■■□□□ 1.4
TTC9-201ENST00000256367 GSDMBQ8TAX9 411 aa23.79■■□□□ 1.4
TTC9-201ENST00000256367 PBKQ96KB5 322 aa23.79■■□□□ 1.4
TTC9-201ENST00000256367 RFX5P48382 616 aaPredicted RBP23.78■■□□□ 1.4
TTC9-201ENST00000256367 SGO2Q562F6 1265 aa23.78■■□□□ 1.4
TTC9-201ENST00000256367 EIF3CLB5ME19 914 aaKnown RBP23.78■■□□□ 1.4
TTC9-201ENST00000256367 ATP2C1P98194 919 aaPredicted RBP23.78■■□□□ 1.4
TTC9-201ENST00000256367 EIF3CQ99613 913 aaKnown RBP23.78■■□□□ 1.4
TTC9-201ENST00000256367 RASSF4Q9H2L5 321 aa23.78■■□□□ 1.4
TTC9-201ENST00000256367 EPB41L5Q9HCM4 733 aa23.78■■□□□ 1.4
TTC9-201ENST00000256367 PP2D1A8MPX8 630 aa23.78■■□□□ 1.4
TTC9-201ENST00000256367 GTF2A1P52655 376 aaPredicted RBP23.78■■□□□ 1.4
TTC9-201ENST00000256367 RSRC2Q7L4I2 434 aaKnown RBP23.78■■□□□ 1.4
TTC9-201ENST00000256367 OSBPL5Q9H0X9 879 aaPredicted RBP23.78■■□□□ 1.4
TTC9-201ENST00000256367 SHC4Q6S5L8 630 aa23.78■■□□□ 1.4
TTC9-201ENST00000256367 CERKQ8TCT0 537 aa23.78■■□□□ 1.4
TTC9-201ENST00000256367 MAD1L1Q9Y6D9 718 aa23.78■■□□□ 1.4
TTC9-201ENST00000256367 TROVE2P10155 538 aaKnown RBP eCLIP23.77■■□□□ 1.4
TTC9-201ENST00000256367 SPZ1Q9BXG8 430 aa23.77■■□□□ 1.4
TTC9-201ENST00000256367 FLT1P17948 1338 aa23.77■■□□□ 1.4
TTC9-201ENST00000256367 NRXN1Q9ULB1 1477 aa23.77■■□□□ 1.4
TTC9-201ENST00000256367 IGDCC4Q8TDY8 1250 aa23.77■■□□□ 1.4
TTC9-201ENST00000256367 SPATA31A5Q5VU36 1347 aa23.77■■□□□ 1.4
TTC9-201ENST00000256367 SPATA31A7Q8IWB4 1347 aa23.77■■□□□ 1.4
TTC9-201ENST00000256367 KRT1P04264 644 aa23.77■■□□□ 1.4
TTC9-201ENST00000256367 USP11P51784 963 aa23.77■■□□□ 1.4
TTC9-201ENST00000256367 C2orf69Q8N8R5 385 aa23.77■■□□□ 1.4
TTC9-201ENST00000256367 ABT1Q9ULW3 272 aaKnown RBP23.77■■□□□ 1.4
TTC9-201ENST00000256367 POTEFA5A3E0 1075 aa23.77■■□□□ 1.4
TTC9-201ENST00000256367 POTEIP0CG38 1075 aa23.77■■□□□ 1.4
TTC9-201ENST00000256367 NKX1-1Q15270 411 aaPredicted RBP23.77■■□□□ 1.4
TTC9-201ENST00000256367 POTEGQ6S5H5 508 aa23.77■■□□□ 1.4
TTC9-201ENST00000256367 POTEEQ6S8J3 1075 aa23.77■■□□□ 1.4
TTC9-201ENST00000256367 FAM71BQ8TC56 605 aa23.77■■□□□ 1.4
TTC9-201ENST00000256367 FAM49AQ9H0Q0 323 aaPredicted RBP23.77■■□□□ 1.4
TTC9-201ENST00000256367 XXYLT1Q8NBI6 393 aa23.77■■□□□ 1.39
TTC9-201ENST00000256367 RILPQ96NA2 401 aa23.77■■□□□ 1.39
TTC9-201ENST00000256367 FRMD4AQ9P2Q2 1039 aaPredicted RBP23.77■■□□□ 1.39
TTC9-201ENST00000256367 P4HBP07237 508 aaKnown RBP23.76■■□□□ 1.39
TTC9-201ENST00000256367 TPD52P55327 224 aaPredicted RBP23.76■■□□□ 1.39
TTC9-201ENST00000256367 SCARA5Q6ZMJ2 495 aa23.76■■□□□ 1.39
TTC9-201ENST00000256367 THNSL1Q8IYQ7 743 aa23.76■■□□□ 1.39
TTC9-201ENST00000256367 ARHGEF2Q92974 986 aaKnown RBP23.76■■□□□ 1.39
TTC9-201ENST00000256367 MTMR4Q9NYA4 1195 aa23.76■■□□□ 1.39
TTC9-201ENST00000256367 HSPA6P17066 643 aa23.76■■□□□ 1.39
TTC9-201ENST00000256367 SFNP31947 248 aa23.76■■□□□ 1.39
TTC9-201ENST00000256367 ARID5BQ14865 1188 aa23.76■■□□□ 1.39
TTC9-201ENST00000256367 PDE11AQ9HCR9 933 aa23.76■■□□□ 1.39
TTC9-201ENST00000256367 IQSEC2Q5JU85 1478 aa23.76■■□□□ 1.39
TTC9-201ENST00000256367 ZMYND10O75800 440 aa23.76■■□□□ 1.39
TTC9-201ENST00000256367 QARSP47897 775 aaKnown RBP23.76■■□□□ 1.39
TTC9-201ENST00000256367 YWHAGP61981 247 aaKnown RBP eCLIP23.76■■□□□ 1.39
TTC9-201ENST00000256367 C2orf54Q08AI8 447 aa23.76■■□□□ 1.39
TTC9-201ENST00000256367 SNX1Q13596 522 aa23.76■■□□□ 1.39
TTC9-201ENST00000256367 DNAJC12Q9UKB3 198 aa23.76■■□□□ 1.39
TTC9-201ENST00000256367 LLGL1Q15334 1064 aa23.76■■□□□ 1.39
TTC9-201ENST00000256367 CLEC17AQ6ZS10 378 aa23.76■■□□□ 1.39
TTC9-201ENST00000256367 PHLDB2Q86SQ0 1253 aa23.76■■□□□ 1.39
TTC9-201ENST00000256367 RNF181Q9P0P0 153 aa23.76■■□□□ 1.39
TTC9-201ENST00000256367 EPHB4P54760 987 aa23.75■■□□□ 1.39
TTC9-201ENST00000256367 RNASELQ05823 741 aaKnown RBP23.75■■□□□ 1.39
TTC9-201ENST00000256367 OR6B2Q6IFH4 312 aa23.75■■□□□ 1.39
TTC9-201ENST00000256367 ARHGAP24Q8N264 748 aa23.75■■□□□ 1.39
TTC9-201ENST00000256367 ZNRF3Q9ULT6 936 aa23.75■■□□□ 1.39
TTC9-201ENST00000256367 AFG3L2Q9Y4W6 797 aa23.75■■□□□ 1.39
TTC9-201ENST00000256367 IPO5O00410 1097 aaKnown RBP23.75■■□□□ 1.39
TTC9-201ENST00000256367 ECEL1O95672 775 aa23.75■■□□□ 1.39
TTC9-201ENST00000256367 FDX1P10109 184 aa23.75■■□□□ 1.39
TTC9-201ENST00000256367 STAT3P40763 770 aa23.75■■□□□ 1.39
TTC9-201ENST00000256367 POLD4Q9HCU8 107 aa23.75■■□□□ 1.39
TTC9-201ENST00000256367 CEP72Q9P209 647 aa23.75■■□□□ 1.39
TTC9-201ENST00000256367 CCDC160A6NGH7 325 aa23.75■■□□□ 1.39
TTC9-201ENST00000256367 HEXIM2Q96MH2 286 aaKnown RBP23.75■■□□□ 1.39
TTC9-201ENST00000256367 CAPS2Q9BXY5 557 aa23.75■■□□□ 1.39
TTC9-201ENST00000256367 SLC38A10Q9HBR0 1119 aa23.75■■□□□ 1.39
TTC9-201ENST00000256367 LRRC4Q9HBW1 653 aa23.75■■□□□ 1.39
TTC9-201ENST00000256367 LRFN2Q9ULH4 789 aa23.75■■□□□ 1.39
TTC9-201ENST00000256367 PNMA8AQ86V59 439 aaPredicted RBP23.74■■□□□ 1.39
TTC9-201ENST00000256367 RIMBP3CA6NJZ7 1639 aa23.74■■□□□ 1.39
TTC9-201ENST00000256367 RIMBP3BA6NNM3 1639 aa23.74■■□□□ 1.39
TTC9-201ENST00000256367 RIMBP3Q9UFD9 1639 aa23.74■■□□□ 1.39
TTC9-201ENST00000256367 CLDN3O15551 220 aa23.74■■□□□ 1.39
TTC9-201ENST00000256367 KNOP1Q1ED39 458 aaKnown RBP23.74■■□□□ 1.39
TTC9-201ENST00000256367 CATSPER4Q7RTX7 472 aa23.74■■□□□ 1.39
TTC9-201ENST00000256367 KIAA1586Q9HCI6 787 aa23.74■■□□□ 1.39
TTC9-201ENST00000256367 TECPR2O15040 1411 aa23.74■■□□□ 1.39
TTC9-201ENST00000256367 SLC16A4O15374 487 aa23.74■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms