RNA–Protein interactions for RNA: ENST00000249776.12

KNSTRN-201, Transcript of kinetochore localized astrin (SPAG5) binding protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KNSTRN, Length 1,714 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNSTRN-201ENST00000249776 C4orf32Q8N8J7 132 aa17.1■□□□□ 0.33
KNSTRN-201ENST00000249776 CAGE1Q8TC20 777 aa17.1■□□□□ 0.33
KNSTRN-201ENST00000249776 MKL1Q969V6 931 aa17.1■□□□□ 0.33
KNSTRN-201ENST00000249776 APBA2Q99767 749 aa17.1■□□□□ 0.33
KNSTRN-201ENST00000249776 LRRC27Q9C0I9 530 aa17.1■□□□□ 0.33
KNSTRN-201ENST00000249776 KBTBD4Q9NVX7 518 aa17.1■□□□□ 0.33
KNSTRN-201ENST00000249776 RRP15Q9Y3B9 282 aaKnown RBP17.1■□□□□ 0.33
KNSTRN-201ENST00000249776 TACC1O75410 805 aa17.1■□□□□ 0.33
KNSTRN-201ENST00000249776 TTLL1O95922 423 aa17.1■□□□□ 0.33
KNSTRN-201ENST00000249776 TRIM21P19474 475 aaKnown RBP17.1■□□□□ 0.33
KNSTRN-201ENST00000249776 CASP1P29466 404 aa17.1■□□□□ 0.33
KNSTRN-201ENST00000249776 TNNT3P45378 269 aaPredicted RBP17.1■□□□□ 0.33
KNSTRN-201ENST00000249776 MAP2K5Q13163 448 aa17.1■□□□□ 0.33
KNSTRN-201ENST00000249776 WDR78Q5VTH9 848 aa17.1■□□□□ 0.33
KNSTRN-201ENST00000249776 ZNF572Q7Z3I7 529 aaPredicted RBP17.1■□□□□ 0.33
KNSTRN-201ENST00000249776 COG1Q8WTW3 980 aa17.1■□□□□ 0.33
KNSTRN-201ENST00000249776 U2AF1L4Q8WU68 220 aaKnown RBP17.1■□□□□ 0.33
KNSTRN-201ENST00000249776 ERGIC2Q96RQ1 377 aa17.1■□□□□ 0.33
KNSTRN-201ENST00000249776 SPATC1LQ9H0A9 340 aa17.1■□□□□ 0.33
KNSTRN-201ENST00000249776 PAK6Q9NQU5 681 aaPredicted RBP17.1■□□□□ 0.33
KNSTRN-201ENST00000249776 MTMR4Q9NYA4 1195 aa17.1■□□□□ 0.33
KNSTRN-201ENST00000249776 TSPY2A6NKD2 308 aa17.09■□□□□ 0.33
KNSTRN-201ENST00000249776 STRNO43815 780 aa17.09■□□□□ 0.33
KNSTRN-201ENST00000249776 RAD21O60216 631 aa17.09■□□□□ 0.33
KNSTRN-201ENST00000249776 SGPL1O95470 568 aa17.09■□□□□ 0.33
KNSTRN-201ENST00000249776 VAV2P52735 878 aa17.09■□□□□ 0.33
KNSTRN-201ENST00000249776 CNNM4Q6P4Q7 775 aa17.09■□□□□ 0.33
KNSTRN-201ENST00000249776 FOXR2Q6PJQ5 311 aa17.09■□□□□ 0.33
KNSTRN-201ENST00000249776 TRIB2Q92519 343 aa17.09■□□□□ 0.33
KNSTRN-201ENST00000249776 P2RX5Q93086 422 aa17.09■□□□□ 0.33
KNSTRN-201ENST00000249776 ATG4CQ96DT6 458 aa17.09■□□□□ 0.33
KNSTRN-201ENST00000249776 CEP95Q96GE4 821 aa17.09■□□□□ 0.33
KNSTRN-201ENST00000249776 TUBGCP2Q9BSJ2 902 aa17.09■□□□□ 0.33
KNSTRN-201ENST00000249776 MOV10L1Q9BXT6 1211 aaKnown RBP17.09■□□□□ 0.33
KNSTRN-201ENST00000249776 EDEM3Q9BZQ6 932 aa17.09■□□□□ 0.33
KNSTRN-201ENST00000249776 ADAMTS5Q9UNA0 930 aa17.09■□□□□ 0.33
KNSTRN-201ENST00000249776 JRKLQ9Y4A0 524 aa17.09■□□□□ 0.33
KNSTRN-201ENST00000249776 COL11A1P12107 1806 aaPredicted RBP17.09■□□□□ 0.33
KNSTRN-201ENST00000249776 RPTORQ8N122 1335 aa17.08■□□□□ 0.33
KNSTRN-201ENST00000249776 F5H6K3 240 aa17.08■□□□□ 0.32
KNSTRN-201ENST00000249776 OPA1O60313 960 aa17.08■□□□□ 0.32
KNSTRN-201ENST00000249776 PPFIA4O75335 1185 aa17.08■□□□□ 0.32
KNSTRN-201ENST00000249776 TFAP4Q01664 338 aa17.08■□□□□ 0.32
KNSTRN-201ENST00000249776 KLRC3Q07444 240 aa17.08■□□□□ 0.32
KNSTRN-201ENST00000249776 TBC1D8BQ0IIM8 1120 aa17.08■□□□□ 0.32
KNSTRN-201ENST00000249776 GRB14Q14449 540 aa17.08■□□□□ 0.32
KNSTRN-201ENST00000249776 FAM83BQ5T0W9 1011 aa17.08■□□□□ 0.32
KNSTRN-201ENST00000249776 PRPF38BQ5VTL8 546 aaKnown RBP17.08■□□□□ 0.32
KNSTRN-201ENST00000249776 KRT25Q7Z3Z0 450 aa17.08■□□□□ 0.32
KNSTRN-201ENST00000249776 MMGT1Q8N4V1 131 aa17.08■□□□□ 0.32
KNSTRN-201ENST00000249776 CSGALNACT2Q8N6G5 542 aa17.08■□□□□ 0.32
KNSTRN-201ENST00000249776 SECISBP2LQ93073 1101 aaKnown RBP17.08■□□□□ 0.32
KNSTRN-201ENST00000249776 ALS2CR12Q96Q35 445 aa17.08■□□□□ 0.32
KNSTRN-201ENST00000249776 PURBQ96QR8 312 aaKnown RBP17.08■□□□□ 0.32
KNSTRN-201ENST00000249776 CHP1Q99653 195 aa17.08■□□□□ 0.32
KNSTRN-201ENST00000249776 MTRQ99707 1265 aa17.08■□□□□ 0.32
KNSTRN-201ENST00000249776 XRN2Q9H0D6 950 aaKnown RBP eCLIP17.08■□□□□ 0.32
KNSTRN-201ENST00000249776 MROH8Q9H579 483 aa17.08■□□□□ 0.32
KNSTRN-201ENST00000249776 HMX1Q9NP08 348 aaPredicted RBP17.08■□□□□ 0.32
KNSTRN-201ENST00000249776 RNF14Q9UBS8 474 aa17.08■□□□□ 0.32
KNSTRN-201ENST00000249776 PPP1R9AQ9ULJ8 1098 aa17.08■□□□□ 0.32
KNSTRN-201ENST00000249776 PES1O00541 588 aaKnown RBP17.07■□□□□ 0.32
KNSTRN-201ENST00000249776 HOXC6P09630 235 aa17.07■□□□□ 0.32
KNSTRN-201ENST00000249776 TCP1P17987 556 aaKnown RBP17.07■□□□□ 0.32
KNSTRN-201ENST00000249776 HNRNPH3P31942 346 aaKnown RBP17.07■□□□□ 0.32
KNSTRN-201ENST00000249776 GRM4Q14833 912 aa17.07■□□□□ 0.32
KNSTRN-201ENST00000249776 TTI2Q6NXR4 508 aa17.07■□□□□ 0.32
KNSTRN-201ENST00000249776 IRF2BP1Q8IU81 584 aa17.07■□□□□ 0.32
KNSTRN-201ENST00000249776 NOA1Q8NC60 698 aaKnown RBP17.07■□□□□ 0.32
KNSTRN-201ENST00000249776 GMCL1P1Q8NEA9 526 aa17.07■□□□□ 0.32
KNSTRN-201ENST00000249776 BBXQ8WY36 941 aaPredicted RBP17.07■□□□□ 0.32
KNSTRN-201ENST00000249776 C7orf25Q9BPX7 421 aa17.07■□□□□ 0.32
KNSTRN-201ENST00000249776 LUC7LQ9NQ29 371 aaKnown RBP17.07■□□□□ 0.32
KNSTRN-201ENST00000249776 HPCAL4Q9UM19 191 aa17.07■□□□□ 0.32
KNSTRN-201ENST00000249776 GDAQ9Y2T3 454 aa17.07■□□□□ 0.32
KNSTRN-201ENST00000249776 REXO2Q9Y3B8 237 aaKnown RBP17.07■□□□□ 0.32
KNSTRN-201ENST00000249776 GOLGA8KD6RF30 607 aa17.07■□□□□ 0.32
KNSTRN-201ENST00000249776 RNF40O75150 1001 aa17.07■□□□□ 0.32
KNSTRN-201ENST00000249776 SLC25A27O95847 323 aa17.07■□□□□ 0.32
KNSTRN-201ENST00000249776 NDUFB10O96000 172 aa17.07■□□□□ 0.32
KNSTRN-201ENST00000249776 COPB2P35606 906 aa17.07■□□□□ 0.32
KNSTRN-201ENST00000249776 MAGEA9P43362 315 aa17.07■□□□□ 0.32
KNSTRN-201ENST00000249776 PLS1Q14651 629 aa17.07■□□□□ 0.32
KNSTRN-201ENST00000249776 IL17AQ16552 155 aa17.07■□□□□ 0.32
KNSTRN-201ENST00000249776 FAM47AQ5JRC9 791 aa17.07■□□□□ 0.32
KNSTRN-201ENST00000249776 MAP3K21Q5TCX8 1036 aa17.07■□□□□ 0.32
KNSTRN-201ENST00000249776 NCAPH2Q6IBW4 605 aa17.07■□□□□ 0.32
KNSTRN-201ENST00000249776 STAMQ92783 540 aa17.07■□□□□ 0.32
KNSTRN-201ENST00000249776 DEFB118Q96PH6 123 aa17.07■□□□□ 0.32
KNSTRN-201ENST00000249776 TTYH3Q9C0H2 523 aa17.07■□□□□ 0.32
KNSTRN-201ENST00000249776 NUCKS1Q9H1E3 243 aaKnown RBP17.07■□□□□ 0.32
KNSTRN-201ENST00000249776 FAM204AQ9H8W3 233 aa17.07■□□□□ 0.32
KNSTRN-201ENST00000249776 NHEJ1Q9H9Q4 299 aaPredicted RBP17.07■□□□□ 0.32
KNSTRN-201ENST00000249776 FAM184BQ9ULE4 1060 aa17.07■□□□□ 0.32
KNSTRN-201ENST00000249776 BRCA2P51587 3418 aa17.06■□□□□ 0.32
KNSTRN-201ENST00000249776 VWA5AO00534 786 aa17.06■□□□□ 0.32
KNSTRN-201ENST00000249776 KLRC4O43908 158 aa17.06■□□□□ 0.32
KNSTRN-201ENST00000249776 ERCC3P19447 782 aa17.06■□□□□ 0.32
KNSTRN-201ENST00000249776 SMARCA1P28370 1054 aa17.06■□□□□ 0.32
KNSTRN-201ENST00000249776 MTIF2P46199 727 aaKnown RBP17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms