RNA–Protein interactions for RNA: ENST00000244728.9

COL21A1-201, Transcript of collagen type XXI alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL21A1, Length 4,339 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1-201ENST00000244728 EPN3Q9H201 632 aa10.06□□□□□ -0.8
COL21A1-201ENST00000244728 EHD4Q9H223 541 aa10.06□□□□□ -0.8
COL21A1-201ENST00000244728 FAM114A2Q9NRY5 505 aa10.06□□□□□ -0.8
COL21A1-201ENST00000244728 NOD1Q9Y239 953 aa10.06□□□□□ -0.8
COL21A1-201ENST00000244728 GOLGA8IPA6NC78 632 aa10.06□□□□□ -0.8
COL21A1-201ENST00000244728 GOLGA8JA6NMD2 632 aa10.06□□□□□ -0.8
COL21A1-201ENST00000244728 ABL1P00519 1130 aa10.06□□□□□ -0.8
COL21A1-201ENST00000244728 HSPA1LP34931 641 aa10.06□□□□□ -0.8
COL21A1-201ENST00000244728 HERVK_113P62684 666 aa10.06□□□□□ -0.8
COL21A1-201ENST00000244728 NT5DC1Q5TFE4 455 aa10.06□□□□□ -0.8
COL21A1-201ENST00000244728 PODNQ7Z5L7 613 aa10.06□□□□□ -0.8
COL21A1-201ENST00000244728 TBC1D1Q86TI0 1168 aaPredicted RBP10.06□□□□□ -0.8
COL21A1-201ENST00000244728 PROCA1Q8NCQ7 364 aaPredicted RBP10.06□□□□□ -0.8
COL21A1-201ENST00000244728 DAAM1Q9Y4D1 1078 aa10.06□□□□□ -0.8
COL21A1-201ENST00000244728 PXDNQ92626 1479 aa10.05□□□□□ -0.8
COL21A1-201ENST00000244728 ATP2A1O14983 1001 aa10.05□□□□□ -0.8
COL21A1-201ENST00000244728 STX2P32856 288 aa10.05□□□□□ -0.8
COL21A1-201ENST00000244728 STAT3P40763 770 aa10.05□□□□□ -0.8
COL21A1-201ENST00000244728 MDH1P40925 334 aaKnown RBP10.05□□□□□ -0.8
COL21A1-201ENST00000244728 POLGP54098 1239 aaPredicted RBP10.05□□□□□ -0.8
COL21A1-201ENST00000244728 MDM2Q00987 491 aaPredicted RBP10.05□□□□□ -0.8
COL21A1-201ENST00000244728 LRRC63Q05C16 580 aa10.05□□□□□ -0.8
COL21A1-201ENST00000244728 STK4Q13043 487 aa10.05□□□□□ -0.8
COL21A1-201ENST00000244728 CUL1Q13616 776 aa10.05□□□□□ -0.8
COL21A1-201ENST00000244728 KCNB1Q14721 858 aa10.05□□□□□ -0.8
COL21A1-201ENST00000244728 TRIM68Q6AZZ1 485 aa10.05□□□□□ -0.8
COL21A1-201ENST00000244728 CIAPIN1Q6FI81 312 aa10.05□□□□□ -0.8
COL21A1-201ENST00000244728 RNF10Q8N5U6 811 aaKnown RBP10.05□□□□□ -0.8
COL21A1-201ENST00000244728 PBKQ96KB5 322 aa10.05□□□□□ -0.8
COL21A1-201ENST00000244728 SLTMQ9NWH9 1034 aaKnown RBP eCLIP10.05□□□□□ -0.8
COL21A1-201ENST00000244728 STK17AQ9UEE5 414 aa10.05□□□□□ -0.8
COL21A1-201ENST00000244728 SEPT9Q9UHD8 586 aaPredicted RBP10.05□□□□□ -0.8
COL21A1-201ENST00000244728 SBDSQ9Y3A5 250 aaKnown RBP eCLIP10.05□□□□□ -0.8
COL21A1-201ENST00000244728 COMMD10Q9Y6G5 202 aa10.05□□□□□ -0.8
COL21A1-201ENST00000244728 SLIT1O75093 1534 aa10.05□□□□□ -0.8
COL21A1-201ENST00000244728 POTEB3A0JP26 581 aa10.05□□□□□ -0.8
COL21A1-201ENST00000244728 POTECB2RU33 542 aa10.05□□□□□ -0.8
COL21A1-201ENST00000244728 ALDH3A1P30838 453 aa10.05□□□□□ -0.8
COL21A1-201ENST00000244728 QRICH1Q2TAL8 776 aa10.05□□□□□ -0.8
COL21A1-201ENST00000244728 PAPD7Q5XG87 772 aaKnown RBP10.05□□□□□ -0.8
COL21A1-201ENST00000244728 ALKBH5Q6P6C2 394 aaKnown RBP10.05□□□□□ -0.8
COL21A1-201ENST00000244728 POTEBQ6S5H4 581 aa10.05□□□□□ -0.8
COL21A1-201ENST00000244728 ARMC9Q7Z3E5 817 aa10.05□□□□□ -0.8
COL21A1-201ENST00000244728 MMGT1Q8N4V1 131 aa10.05□□□□□ -0.8
COL21A1-201ENST00000244728 CEP170P1Q96L14 293 aa10.05□□□□□ -0.8
COL21A1-201ENST00000244728 RNPC3Q96LT9 517 aaKnown RBP10.05□□□□□ -0.8
COL21A1-201ENST00000244728 FMO2Q99518 471 aa10.05□□□□□ -0.8
COL21A1-201ENST00000244728 CAPN6Q9Y6Q1 641 aa10.05□□□□□ -0.8
COL21A1-201ENST00000244728 OVOS2A0A0G2JMS6 1433 aa10.05□□□□□ -0.8
COL21A1-201ENST00000244728 A0A087X0B3 334 aa10.05□□□□□ -0.8
COL21A1-201ENST00000244728 CLGNO14967 610 aa10.05□□□□□ -0.8
COL21A1-201ENST00000244728 ZBTB5O15062 677 aa10.05□□□□□ -0.8
COL21A1-201ENST00000244728 ZKSCAN8Q15776 578 aaPredicted RBP10.05□□□□□ -0.8
COL21A1-201ENST00000244728 INTS5Q6P9B9 1019 aaKnown RBP10.05□□□□□ -0.8
COL21A1-201ENST00000244728 MCF2L2Q86YR7 1114 aa10.05□□□□□ -0.8
COL21A1-201ENST00000244728 FAM186BQ8IYM0 893 aa10.05□□□□□ -0.8
COL21A1-201ENST00000244728 ZNF526Q8TF50 670 aaPredicted RBP10.05□□□□□ -0.8
COL21A1-201ENST00000244728 PPP1R12CQ9BZL4 782 aa10.05□□□□□ -0.8
COL21A1-201ENST00000244728 TAF1DQ9H5J8 278 aaPredicted RBP10.05□□□□□ -0.8
COL21A1-201ENST00000244728 AS3MTQ9HBK9 375 aa10.05□□□□□ -0.8
COL21A1-201ENST00000244728 FAM217BQ9NTX9 383 aaPredicted RBP10.05□□□□□ -0.8
COL21A1-201ENST00000244728 PDS5AQ29RF7 1337 aaKnown RBP10.04□□□□□ -0.8
COL21A1-201ENST00000244728 CASP7P55210 303 aa10.04□□□□□ -0.8
COL21A1-201ENST00000244728 OSTNP61366 133 aa10.04□□□□□ -0.8
COL21A1-201ENST00000244728 SPP2Q13103 211 aa10.04□□□□□ -0.8
COL21A1-201ENST00000244728 PPP2R5DQ14738 602 aa10.04□□□□□ -0.8
COL21A1-201ENST00000244728 DPY19L2Q6NUT2 758 aa10.04□□□□□ -0.8
COL21A1-201ENST00000244728 CAPN12Q6ZSI9 719 aa10.04□□□□□ -0.8
COL21A1-201ENST00000244728 TMEM179Q6ZVK1 233 aa10.04□□□□□ -0.8
COL21A1-201ENST00000244728 DCPSQ96C86 337 aaKnown RBP10.04□□□□□ -0.8
COL21A1-201ENST00000244728 TRIM9Q9C026 710 aa10.04□□□□□ -0.8
COL21A1-201ENST00000244728 MEGF6O75095 1541 aa10.04□□□□□ -0.8
COL21A1-201ENST00000244728 RIMBP3CA6NJZ7 1639 aa10.04□□□□□ -0.8
COL21A1-201ENST00000244728 RIMBP3BA6NNM3 1639 aa10.04□□□□□ -0.8
COL21A1-201ENST00000244728 RIMBP3Q9UFD9 1639 aa10.04□□□□□ -0.8
COL21A1-201ENST00000244728 GFPT2O94808 682 aa10.04□□□□□ -0.8
COL21A1-201ENST00000244728 GCFC2P16383 781 aaKnown RBP10.04□□□□□ -0.8
COL21A1-201ENST00000244728 MESDQ14696 234 aa10.04□□□□□ -0.8
COL21A1-201ENST00000244728 FAM47CQ5HY64 1035 aa10.04□□□□□ -0.8
COL21A1-201ENST00000244728 UNC13DQ70J99 1090 aa10.04□□□□□ -0.8
COL21A1-201ENST00000244728 LMNTD2Q8IXW0 634 aa10.04□□□□□ -0.8
COL21A1-201ENST00000244728 ADGRF4Q8IZF3 695 aa10.04□□□□□ -0.8
COL21A1-201ENST00000244728 OR2W6PQ8NHA6 318 aa10.04□□□□□ -0.8
COL21A1-201ENST00000244728 ELAC2Q9BQ52 826 aaKnown RBP10.04□□□□□ -0.8
COL21A1-201ENST00000244728 MAK16Q9BXY0 300 aaKnown RBP10.04□□□□□ -0.8
COL21A1-201ENST00000244728 HSD3B7Q9H2F3 369 aa10.04□□□□□ -0.8
COL21A1-201ENST00000244728 DAGLAQ9Y4D2 1042 aa10.04□□□□□ -0.8
COL21A1-201ENST00000244728 PNPLA7Q6ZV29 1317 aa10.04□□□□□ -0.8
COL21A1-201ENST00000244728 SIGLEC1Q9BZZ2 1709 aa10.04□□□□□ -0.8
COL21A1-201ENST00000244728 FAM237AA0A1B0GTK4 181 aa10.04□□□□□ -0.8
COL21A1-201ENST00000244728 POTEFA5A3E0 1075 aa10.04□□□□□ -0.8
COL21A1-201ENST00000244728 POTEIP0CG38 1075 aa10.04□□□□□ -0.8
COL21A1-201ENST00000244728 PPP2R2AP63151 447 aa10.04□□□□□ -0.8
COL21A1-201ENST00000244728 PPP2R5EQ16537 467 aa10.04□□□□□ -0.8
COL21A1-201ENST00000244728 MTERF2Q49AM1 385 aa10.04□□□□□ -0.8
COL21A1-201ENST00000244728 PRAMEF18Q5VWM3 479 aa10.04□□□□□ -0.8
COL21A1-201ENST00000244728 POTEGQ6S5H5 508 aa10.04□□□□□ -0.8
COL21A1-201ENST00000244728 POTEEQ6S8J3 1075 aa10.04□□□□□ -0.8
COL21A1-201ENST00000244728 NEDD1Q8NHV4 660 aa10.04□□□□□ -0.8
COL21A1-201ENST00000244728 KLHL29Q96CT2 875 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms