RNA–Protein interactions for RNA: ENST00000243326.9

RIF1-201, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RIF1, Length 15,003 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-201ENST00000243326 TFAMQ00059 246 aaKnown RBP8.1□□□□□ -1.11
RIF1-201ENST00000243326 EZH2Q15910 746 aaKnown RBP8.1□□□□□ -1.11
RIF1-201ENST00000243326 MFSD14BQ5SR56 506 aa8.1□□□□□ -1.11
RIF1-201ENST00000243326 LMBRD2Q68DH5 695 aaPredicted RBP8.1□□□□□ -1.11
RIF1-201ENST00000243326 TMEM154Q6P9G4 183 aa8.1□□□□□ -1.11
RIF1-201ENST00000243326 NACA2Q9H009 215 aa8.1□□□□□ -1.11
RIF1-201ENST00000243326 XPO5Q9HAV4 1204 aaKnown RBP eCLIP8.1□□□□□ -1.117e-11■■■■□ 26.1
RIF1-201ENST00000243326 UBE2Q2LH0YL09 131 aa8.1□□□□□ -1.11
RIF1-201ENST00000243326 PMS2P54278 862 aa8.1□□□□□ -1.11
RIF1-201ENST00000243326 LRRC31Q6UY01 552 aa8.1□□□□□ -1.11
RIF1-201ENST00000243326 EEPD1Q7L9B9 569 aa8.1□□□□□ -1.11
RIF1-201ENST00000243326 RNF135Q8IUD6 432 aa8.1□□□□□ -1.11
RIF1-201ENST00000243326 MARCOQ9UEW3 520 aaPredicted RBP8.1□□□□□ -1.11
RIF1-201ENST00000243326 ZNF521Q96K83 1311 aa8.1□□□□□ -1.11
RIF1-201ENST00000243326 USP17L5A8MUK1 530 aa8.1□□□□□ -1.11
RIF1-201ENST00000243326 CACNB3P54284 484 aa8.1□□□□□ -1.11
RIF1-201ENST00000243326 ALS2CLQ60I27 953 aa8.1□□□□□ -1.11
RIF1-201ENST00000243326 UTS2BQ765I0 119 aa8.1□□□□□ -1.11
RIF1-201ENST00000243326 CCDC138Q96M89 665 aa8.1□□□□□ -1.11
RIF1-201ENST00000243326 NEMP1O14524 444 aa8.1□□□□□ -1.11
RIF1-201ENST00000243326 IKBKBO14920 756 aa8.1□□□□□ -1.11
RIF1-201ENST00000243326 ENO1P06733 434 aaKnown RBP8.1□□□□□ -1.11
RIF1-201ENST00000243326 GCLMP48507 274 aa8.1□□□□□ -1.11
RIF1-201ENST00000243326 NSUN2Q08J23 767 aaKnown RBP eCLIP8.1□□□□□ -1.11
RIF1-201ENST00000243326 LONRF1Q17RB8 773 aa8.1□□□□□ -1.11
RIF1-201ENST00000243326 SLFN13Q68D06 897 aa8.1□□□□□ -1.11
RIF1-201ENST00000243326 POLR3EQ9NVU0 708 aa8.1□□□□□ -1.11
RIF1-201ENST00000243326 EIF2AK3Q9NZJ5 1116 aaKnown RBP8.1□□□□□ -1.11
RIF1-201ENST00000243326 PCDHA4Q9UN74 947 aa8.1□□□□□ -1.11
RIF1-201ENST00000243326 CYP2C19P33261 490 aa8.1□□□□□ -1.11
RIF1-201ENST00000243326 NOP14P78316 857 aaKnown RBP8.1□□□□□ -1.11
RIF1-201ENST00000243326 CCDC87Q9NVE4 849 aa8.1□□□□□ -1.11
RIF1-201ENST00000243326 ARHGAP4P98171 946 aa8.1□□□□□ -1.11
RIF1-201ENST00000243326 NAIF1Q69YI7 327 aaPredicted RBP8.1□□□□□ -1.11
RIF1-201ENST00000243326 NBPF10Q6P3W6 841 aaKnown RBP8.1□□□□□ -1.11
RIF1-201ENST00000243326 RAD9BQ6WBX8 426 aa8.1□□□□□ -1.11
RIF1-201ENST00000243326 ARMC9Q7Z3E5 817 aa8.1□□□□□ -1.11
RIF1-201ENST00000243326 ACSF2Q96CM8 615 aaPredicted RBP8.1□□□□□ -1.11
RIF1-201ENST00000243326 SH2D3AQ9BRG2 576 aa8.1□□□□□ -1.11
RIF1-201ENST00000243326 DENND4BO75064 1496 aaPredicted RBP8.1□□□□□ -1.11
RIF1-201ENST00000243326 MAPK13O15264 365 aa8.1□□□□□ -1.11
RIF1-201ENST00000243326 ENOX1Q8TC92 643 aaKnown RBP8.1□□□□□ -1.11
RIF1-201ENST00000243326 Q9H521 79 aa8.1□□□□□ -1.11
RIF1-201ENST00000243326 TMOD4Q9NZQ9 345 aa8.1□□□□□ -1.11
RIF1-201ENST00000243326 E9PMD0 336 aa8.09□□□□□ -1.11
RIF1-201ENST00000243326 ART3Q13508 389 aa8.09□□□□□ -1.11
RIF1-201ENST00000243326 SREK1IP1Q8N9Q2 155 aaPredicted RBP8.09□□□□□ -1.11
RIF1-201ENST00000243326 SLC44A5Q8NCS7 719 aa8.09□□□□□ -1.11
RIF1-201ENST00000243326 RNF217Q8TC41 542 aa8.09□□□□□ -1.11
RIF1-201ENST00000243326 LIMA1Q9UHB6 759 aaKnown RBP8.09□□□□□ -1.11
RIF1-201ENST00000243326 PMS1P54277 932 aaKnown RBP8.09□□□□□ -1.11
RIF1-201ENST00000243326 DAB2P98082 770 aa8.09□□□□□ -1.11
RIF1-201ENST00000243326 GRAMD4Q6IC98 578 aa8.09□□□□□ -1.11
RIF1-201ENST00000243326 KRT27Q7Z3Y8 459 aa8.09□□□□□ -1.11
RIF1-201ENST00000243326 FBXO11Q86XK2 927 aa8.09□□□□□ -1.11
RIF1-201ENST00000243326 HACD3Q9P035 362 aa8.09□□□□□ -1.11
RIF1-201ENST00000243326 COL4A3BPQ9Y5P4 624 aa8.09□□□□□ -1.11
RIF1-201ENST00000243326 MROH7-TTC4A0A0A0MT08 1334 aa8.09□□□□□ -1.11
RIF1-201ENST00000243326 POLGP54098 1239 aaPredicted RBP8.09□□□□□ -1.11
RIF1-201ENST00000243326 GRIN1Q05586 938 aa8.09□□□□□ -1.11
RIF1-201ENST00000243326 ERFEQ4G0M1 354 aa8.09□□□□□ -1.11
RIF1-201ENST00000243326 GLG1Q92896 1179 aa8.09□□□□□ -1.11
RIF1-201ENST00000243326 PICK1Q9NRD5 415 aa8.09□□□□□ -1.11
RIF1-201ENST00000243326 OR6B2Q6IFH4 312 aa8.09□□□□□ -1.11
RIF1-201ENST00000243326 PPP4R4Q6NUP7 873 aa8.09□□□□□ -1.11
RIF1-201ENST00000243326 C7orf31Q8N865 590 aa8.09□□□□□ -1.11
RIF1-201ENST00000243326 KCTD6Q8NC69 237 aa8.09□□□□□ -1.11
RIF1-201ENST00000243326 CCDC90BQ9GZT6 254 aa8.09□□□□□ -1.11
RIF1-201ENST00000243326 GMNCA6NCL1 334 aa8.09□□□□□ -1.11
RIF1-201ENST00000243326 PLA2G4BP0C869 781 aa8.09□□□□□ -1.11
RIF1-201ENST00000243326 MARK3P27448 753 aa8.09□□□□□ -1.11
RIF1-201ENST00000243326 RBM12Q9NTZ6 932 aaKnown RBP8.09□□□□□ -1.11
RIF1-201ENST00000243326 ANGPTL2Q9UKU9 493 aa8.09□□□□□ -1.11
RIF1-201ENST00000243326 HPCAL4Q9UM19 191 aa8.09□□□□□ -1.11
RIF1-201ENST00000243326 TPRP12270 2363 aaKnown RBP8.09□□□□□ -1.11
RIF1-201ENST00000243326 EDC4Q6P2E9 1401 aaKnown RBP8.09□□□□□ -1.11
RIF1-201ENST00000243326 SKIP12755 728 aa8.09□□□□□ -1.11
RIF1-201ENST00000243326 DEPTORQ8TB45 409 aa8.09□□□□□ -1.11
RIF1-201ENST00000243326 TYW1Q9NV66 732 aaKnown RBP8.09□□□□□ -1.11
RIF1-201ENST00000243326 GOLGA8CPA6NN73 597 aa8.09□□□□□ -1.11
RIF1-201ENST00000243326 CAPN9O14815 690 aa8.09□□□□□ -1.11
RIF1-201ENST00000243326 RNF8O76064 485 aa8.09□□□□□ -1.11
RIF1-201ENST00000243326 HSPA4LO95757 839 aa8.09□□□□□ -1.11
RIF1-201ENST00000243326 C4orf33Q8N1A6 199 aa8.09□□□□□ -1.11
RIF1-201ENST00000243326 TRAIPQ9BWF2 469 aa8.09□□□□□ -1.11
RIF1-201ENST00000243326 SETD1BQ9UPS6 1966 aaKnown RBP8.09□□□□□ -1.11
RIF1-201ENST00000243326 PCDH11XQ9BZA7 1347 aa8.09□□□□□ -1.11
RIF1-201ENST00000243326 PCDH11YQ9BZA8 1340 aa8.09□□□□□ -1.11
RIF1-201ENST00000243326 GNA14O95837 355 aa8.09□□□□□ -1.11
RIF1-201ENST00000243326 ATP2A3Q93084 1043 aa8.09□□□□□ -1.11
RIF1-201ENST00000243326 PDLIM2Q96JY6 352 aa8.09□□□□□ -1.11
RIF1-201ENST00000243326 HNRNPH1P31943 449 aaKnown RBP8.09□□□□□ -1.11
RIF1-201ENST00000243326 SLC17A8Q8NDX2 589 aa8.09□□□□□ -1.11
RIF1-201ENST00000243326 FAM8A1Q9UBU6 413 aa8.09□□□□□ -1.11
RIF1-201ENST00000243326 ERVK-7P63135 1459 aa8.09□□□□□ -1.11
RIF1-201ENST00000243326 ZNF518AQ6AHZ1 1483 aa8.09□□□□□ -1.11
RIF1-201ENST00000243326 TMPRSS15P98073 1019 aa8.09□□□□□ -1.11
RIF1-201ENST00000243326 FAM47CQ5HY64 1035 aa8.09□□□□□ -1.11
RIF1-201ENST00000243326 TRIML1Q8N9V2 468 aa8.09□□□□□ -1.11
RIF1-201ENST00000243326 AMACRQ9UHK6 382 aa8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms