RNA–Protein interactions for RNA: ENST00000243253.7

SEC61A1-201, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC61A1, Length 3,635 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-201ENST00000243253 PAK2Q13177 524 aa13.11□□□□□ -0.31
SEC61A1-201ENST00000243253 SPRED3Q2MJR0 410 aa13.11□□□□□ -0.31
SEC61A1-201ENST00000243253 CRY2Q49AN0 593 aa13.11□□□□□ -0.31
SEC61A1-201ENST00000243253 LRIG3Q6UXM1 1119 aa13.11□□□□□ -0.31
SEC61A1-201ENST00000243253 CERS3Q8IU89 383 aa13.11□□□□□ -0.31
SEC61A1-201ENST00000243253 FAM133AQ8N9E0 248 aa13.11□□□□□ -0.31
SEC61A1-201ENST00000243253 SLC30A5Q8TAD4 765 aa13.11□□□□□ -0.31
SEC61A1-201ENST00000243253 MYCBPAPQ8TBZ2 947 aa13.11□□□□□ -0.31
SEC61A1-201ENST00000243253 EPB41L4BQ9H329 900 aa13.11□□□□□ -0.31
SEC61A1-201ENST00000243253 CD209Q9NNX6 404 aa13.11□□□□□ -0.31
SEC61A1-201ENST00000243253 USP17L15C9J2P7 530 aa13.1□□□□□ -0.31
SEC61A1-201ENST00000243253 USP17L13C9JLJ4 530 aa13.1□□□□□ -0.31
SEC61A1-201ENST00000243253 USP17L11C9JVI0 530 aa13.1□□□□□ -0.31
SEC61A1-201ENST00000243253 USP17L18D6R9N7 530 aa13.1□□□□□ -0.31
SEC61A1-201ENST00000243253 USP17L22D6RA61 530 aa13.1□□□□□ -0.31
SEC61A1-201ENST00000243253 USP17L17D6RBQ6 530 aa13.1□□□□□ -0.31
SEC61A1-201ENST00000243253 USP17L19D6RCP7 530 aa13.1□□□□□ -0.31
SEC61A1-201ENST00000243253 USP17L20D6RJB6 530 aa13.1□□□□□ -0.31
SEC61A1-201ENST00000243253 MEFVO15553 781 aaPredicted RBP13.1□□□□□ -0.31
SEC61A1-201ENST00000243253 GPSM2P81274 684 aa13.1□□□□□ -0.31
SEC61A1-201ENST00000243253 ZNF844Q08AG5 666 aa13.1□□□□□ -0.31
SEC61A1-201ENST00000243253 USP17L24Q0WX57 530 aa13.1□□□□□ -0.31
SEC61A1-201ENST00000243253 ASPRV1Q53RT3 343 aa13.1□□□□□ -0.31
SEC61A1-201ENST00000243253 FAM26FQ5R3K3 315 aa13.1□□□□□ -0.31
SEC61A1-201ENST00000243253 USP17L6PQ6QN14 398 aa13.1□□□□□ -0.31
SEC61A1-201ENST00000243253 ZNF473Q8WTR7 871 aaKnown RBP13.1□□□□□ -0.31
SEC61A1-201ENST00000243253 LENG9Q96B70 501 aa13.1□□□□□ -0.31
SEC61A1-201ENST00000243253 CEP89Q96ST8 783 aa13.1□□□□□ -0.31
SEC61A1-201ENST00000243253 MED24O75448 989 aa13.1□□□□□ -0.31
SEC61A1-201ENST00000243253 KIF4AO95239 1232 aa13.1□□□□□ -0.31
SEC61A1-201ENST00000243253 PAEPP09466 180 aa13.1□□□□□ -0.31
SEC61A1-201ENST00000243253 ACTN1P12814 892 aa13.1□□□□□ -0.31
SEC61A1-201ENST00000243253 NR1D1P20393 614 aa13.1□□□□□ -0.31
SEC61A1-201ENST00000243253 ATP1A2P50993 1020 aa13.1□□□□□ -0.31
SEC61A1-201ENST00000243253 ZNF543Q08ER8 600 aa13.1□□□□□ -0.31
SEC61A1-201ENST00000243253 CCDC181Q5TID7 509 aa13.1□□□□□ -0.31
SEC61A1-201ENST00000243253 SEPT11Q9NVA2 429 aaKnown RBP13.1□□□□□ -0.31
SEC61A1-201ENST00000243253 NAGPAQ9UK23 515 aa13.1□□□□□ -0.31
SEC61A1-201ENST00000243253 PNMA6FA0A0J9YX94 578 aa13.09□□□□□ -0.31
SEC61A1-201ENST00000243253 SLC26A4O43511 780 aa13.09□□□□□ -0.31
SEC61A1-201ENST00000243253 GDF11O95390 407 aa13.09□□□□□ -0.31
SEC61A1-201ENST00000243253 GNA14O95837 355 aa13.09□□□□□ -0.31
SEC61A1-201ENST00000243253 PON1P27169 355 aa13.09□□□□□ -0.31
SEC61A1-201ENST00000243253 POLD1P28340 1107 aa13.09□□□□□ -0.31
SEC61A1-201ENST00000243253 DDR1Q08345 913 aa13.09□□□□□ -0.31
SEC61A1-201ENST00000243253 KCNH2Q12809 1159 aa13.09□□□□□ -0.31
SEC61A1-201ENST00000243253 EPHA7Q15375 998 aa13.09□□□□□ -0.31
SEC61A1-201ENST00000243253 KIAA0753Q2KHM9 967 aa13.09□□□□□ -0.31
SEC61A1-201ENST00000243253 ETNPPLQ8TBG4 499 aa13.09□□□□□ -0.31
SEC61A1-201ENST00000243253 SH2D3AQ9BRG2 576 aa13.09□□□□□ -0.31
SEC61A1-201ENST00000243253 PITPNM2Q9BZ72 1349 aa13.09□□□□□ -0.31
SEC61A1-201ENST00000243253 GPR88Q9GZN0 384 aa13.09□□□□□ -0.31
SEC61A1-201ENST00000243253 GOLPH3Q9H4A6 298 aa13.09□□□□□ -0.31
SEC61A1-201ENST00000243253 KCNQ5Q9NR82 932 aa13.09□□□□□ -0.31
SEC61A1-201ENST00000243253 SWAP70Q9UH65 585 aa13.09□□□□□ -0.31
SEC61A1-201ENST00000243253 DDX25Q9UHL0 483 aaKnown RBP13.09□□□□□ -0.31
SEC61A1-201ENST00000243253 MYO1FO00160 1098 aa13.09□□□□□ -0.31
SEC61A1-201ENST00000243253 SPATA31C1P0DKV0 1188 aa13.09□□□□□ -0.31
SEC61A1-201ENST00000243253 SLC9A1P19634 815 aa13.09□□□□□ -0.31
SEC61A1-201ENST00000243253 CCDC40Q4G0X9 1142 aa13.09□□□□□ -0.31
SEC61A1-201ENST00000243253 KRT79Q5XKE5 535 aa13.09□□□□□ -0.31
SEC61A1-201ENST00000243253 CERKQ8TCT0 537 aa13.09□□□□□ -0.31
SEC61A1-201ENST00000243253 ATP8B4Q8TF62 1192 aa13.09□□□□□ -0.31
SEC61A1-201ENST00000243253 HES6Q96HZ4 224 aa13.09□□□□□ -0.31
SEC61A1-201ENST00000243253 CALR3Q96L12 384 aaKnown RBP13.09□□□□□ -0.31
SEC61A1-201ENST00000243253 BCAS3Q9H6U6 928 aa13.09□□□□□ -0.31
SEC61A1-201ENST00000243253 CNOT8Q9UFF9 292 aaKnown RBP13.09□□□□□ -0.31
SEC61A1-201ENST00000243253 PLAAQ9Y263 795 aa13.09□□□□□ -0.31
SEC61A1-201ENST00000243253 ZMYM2Q9UBW7 1377 aa13.09□□□□□ -0.31
SEC61A1-201ENST00000243253 C5orf60A6NFR6 353 aa13.09□□□□□ -0.31
SEC61A1-201ENST00000243253 HMGB1P1B2RPK0 211 aaPredicted RBP13.09□□□□□ -0.31
SEC61A1-201ENST00000243253 AKR1B1P15121 316 aa13.09□□□□□ -0.31
SEC61A1-201ENST00000243253 SEC24CP53992 1094 aa13.09□□□□□ -0.31
SEC61A1-201ENST00000243253 BMT2Q1RMZ1 405 aa13.09□□□□□ -0.31
SEC61A1-201ENST00000243253 DCAF12L1Q5VU92 463 aa13.09□□□□□ -0.31
SEC61A1-201ENST00000243253 ZNF804AQ7Z570 1209 aa13.09□□□□□ -0.31
SEC61A1-201ENST00000243253 MICALL1Q8N3F8 863 aa13.09□□□□□ -0.31
SEC61A1-201ENST00000243253 TPCN2Q8NHX9 752 aa13.09□□□□□ -0.31
SEC61A1-201ENST00000243253 CCT8L2Q96SF2 557 aa13.09□□□□□ -0.31
SEC61A1-201ENST00000243253 LRRC27Q9C0I9 530 aa13.09□□□□□ -0.31
SEC61A1-201ENST00000243253 DDX4Q9NQI0 724 aaKnown RBP13.09□□□□□ -0.31
SEC61A1-201ENST00000243253 SFI1A8K8P3 1242 aa13.08□□□□□ -0.31
SEC61A1-201ENST00000243253 TRAF5O00463 557 aa13.08□□□□□ -0.31
SEC61A1-201ENST00000243253 RASSF9O75901 435 aa13.08□□□□□ -0.31
SEC61A1-201ENST00000243253 FAM107AO95990 144 aa13.08□□□□□ -0.31
SEC61A1-201ENST00000243253 UCHL3P15374 230 aa13.08□□□□□ -0.31
SEC61A1-201ENST00000243253 STAT3P40763 770 aa13.08□□□□□ -0.31
SEC61A1-201ENST00000243253 GUCY2FP51841 1108 aa13.08□□□□□ -0.31
SEC61A1-201ENST00000243253 HDLBPQ00341 1268 aaKnown RBP13.08□□□□□ -0.31
SEC61A1-201ENST00000243253 GIT2Q14161 759 aa13.08□□□□□ -0.31
SEC61A1-201ENST00000243253 TMEM266Q2M3C6 531 aa13.08□□□□□ -0.31
SEC61A1-201ENST00000243253 C10orf76Q5T2E6 689 aa13.08□□□□□ -0.31
SEC61A1-201ENST00000243253 ZNF287Q9HBT7 754 aa13.08□□□□□ -0.31
SEC61A1-201ENST00000243253 TTC7AQ9ULT0 858 aaPredicted RBP13.08□□□□□ -0.31
SEC61A1-201ENST00000243253 ASTN1O14525 1302 aa13.08□□□□□ -0.32
SEC61A1-201ENST00000243253 CHADLQ6NUI6 762 aa13.08□□□□□ -0.32
SEC61A1-201ENST00000243253 METTL13Q8N6R0 699 aa13.08□□□□□ -0.32
SEC61A1-201ENST00000243253 EMILIN3Q9NT22 766 aa13.08□□□□□ -0.32
SEC61A1-201ENST00000243253 A0A0A6YYK5 440 aaPredicted RBP13.08□□□□□ -0.32
SEC61A1-201ENST00000243253 POTEB3A0JP26 581 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms