RNA–Protein interactions for RNA: ENST00000241312.8

CSMD2-201, Transcript of CUB and Sushi multiple domains 2, humanhuman

TSL 1 (best)

Gene CSMD2, Length 13,108 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD2-201ENST00000241312 PARVGQ9HBI0 331 aa7.24□□□□□ -1.25
CSMD2-201ENST00000241312 L3MBTL1Q9Y468 752 aa7.24□□□□□ -1.25
CSMD2-201ENST00000241312 CDC42BPGQ6DT37 1551 aa7.24□□□□□ -1.25
CSMD2-201ENST00000241312 ANO9A1A5B4 782 aa7.24□□□□□ -1.25
CSMD2-201ENST00000241312 HSPA4LO95757 839 aa7.24□□□□□ -1.25
CSMD2-201ENST00000241312 NOP14P78316 857 aaKnown RBP7.24□□□□□ -1.25
CSMD2-201ENST00000241312 SURF1Q15526 300 aa7.24□□□□□ -1.25
CSMD2-201ENST00000241312 BTG4Q9NY30 223 aa7.24□□□□□ -1.25
CSMD2-201ENST00000241312 GOLGA8SH3BPF8 625 aa7.24□□□□□ -1.25
CSMD2-201ENST00000241312 ANXA13P27216 316 aa7.24□□□□□ -1.25
CSMD2-201ENST00000241312 MIS18BP1Q6P0N0 1132 aa7.24□□□□□ -1.25
CSMD2-201ENST00000241312 SMYD4Q8IYR2 804 aaPredicted RBP7.24□□□□□ -1.25
CSMD2-201ENST00000241312 TJP3O95049 919 aa7.24□□□□□ -1.25
CSMD2-201ENST00000241312 CD2BP2O95400 341 aaKnown RBP7.24□□□□□ -1.25
CSMD2-201ENST00000241312 KLHL38Q2WGJ6 581 aa7.24□□□□□ -1.25
CSMD2-201ENST00000241312 UBE2TQ9NPD8 197 aaPredicted RBP7.24□□□□□ -1.25
CSMD2-201ENST00000241312 PPIP5K2O43314 1243 aa7.24□□□□□ -1.25
CSMD2-201ENST00000241312 BTDP43251 543 aa7.24□□□□□ -1.25
CSMD2-201ENST00000241312 AP2B1P63010 937 aa7.24□□□□□ -1.25
CSMD2-201ENST00000241312 NUGGCQ68CJ6 796 aa7.24□□□□□ -1.25
CSMD2-201ENST00000241312 A0A1B0GW55 424 aa7.23□□□□□ -1.25
CSMD2-201ENST00000241312 PODXLO00592 558 aa7.23□□□□□ -1.25
CSMD2-201ENST00000241312 CHUKO15111 745 aa7.23□□□□□ -1.25
CSMD2-201ENST00000241312 CALB1P05937 261 aa7.23□□□□□ -1.25
CSMD2-201ENST00000241312 DUX4L2P0CJ85 424 aa7.23□□□□□ -1.25
CSMD2-201ENST00000241312 DUX4L3P0CJ86 424 aa7.23□□□□□ -1.25
CSMD2-201ENST00000241312 DUX4L4P0CJ87 422 aa7.23□□□□□ -1.25
CSMD2-201ENST00000241312 DUX4L5P0CJ88 424 aa7.23□□□□□ -1.25
CSMD2-201ENST00000241312 DUX4L6P0CJ89 424 aa7.23□□□□□ -1.25
CSMD2-201ENST00000241312 DUX4L7P0CJ90 424 aa7.23□□□□□ -1.25
CSMD2-201ENST00000241312 SMARCA1P28370 1054 aa7.23□□□□□ -1.25
CSMD2-201ENST00000241312 ENOX1Q8TC92 643 aaKnown RBP7.23□□□□□ -1.25
CSMD2-201ENST00000241312 MAP4K1Q92918 833 aa7.23□□□□□ -1.25
CSMD2-201ENST00000241312 DUX4Q9UBX2 424 aa7.23□□□□□ -1.25
CSMD2-201ENST00000241312 PSMA2P25787 234 aa7.23□□□□□ -1.25
CSMD2-201ENST00000241312 MKRN3Q13064 507 aaKnown RBP7.23□□□□□ -1.25
CSMD2-201ENST00000241312 RYBPQ8N488 228 aaPredicted RBP7.23□□□□□ -1.25
CSMD2-201ENST00000241312 ASPSCR1Q9BZE9 553 aa7.23□□□□□ -1.25
CSMD2-201ENST00000241312 KMT5AQ9NQR1 393 aa7.23□□□□□ -1.25
CSMD2-201ENST00000241312 CAPN11Q9UMQ6 739 aa7.23□□□□□ -1.25
CSMD2-201ENST00000241312 ZNF189O75820 626 aaPredicted RBP7.23□□□□□ -1.25
CSMD2-201ENST00000241312 GYS2P54840 703 aa7.23□□□□□ -1.25
CSMD2-201ENST00000241312 TBC1D10BQ4KMP7 808 aaPredicted RBP7.23□□□□□ -1.25
CSMD2-201ENST00000241312 ZMYM1Q5SVZ6 1142 aa7.23□□□□□ -1.25
CSMD2-201ENST00000241312 EPM2AIP1Q7L775 607 aaPredicted RBP7.23□□□□□ -1.25
CSMD2-201ENST00000241312 RASA4BC9J798 803 aa7.23□□□□□ -1.25
CSMD2-201ENST00000241312 RASA4O43374 803 aa7.23□□□□□ -1.25
CSMD2-201ENST00000241312 KCTD2Q14681 263 aa7.23□□□□□ -1.25
CSMD2-201ENST00000241312 KIF19Q2TAC6 998 aa7.23□□□□□ -1.25
CSMD2-201ENST00000241312 ZNF496Q96IT1 587 aaPredicted RBP7.23□□□□□ -1.25
CSMD2-201ENST00000241312 RBM41Q96IZ5 413 aaKnown RBP7.23□□□□□ -1.25
CSMD2-201ENST00000241312 BPIFA3Q9BQP9 254 aa7.23□□□□□ -1.25
CSMD2-201ENST00000241312 THRAP3Q9Y2W1 955 aaKnown RBP7.23□□□□□ -1.25
CSMD2-201ENST00000241312 CFAP73A6NFT4 308 aa7.23□□□□□ -1.25
CSMD2-201ENST00000241312 PER1O15534 1290 aaPredicted RBP7.23□□□□□ -1.25
CSMD2-201ENST00000241312 CNPY4Q8N129 248 aa7.23□□□□□ -1.25
CSMD2-201ENST00000241312 SH3GLB2Q9NR46 395 aa7.23□□□□□ -1.25
CSMD2-201ENST00000241312 EIF4A1P60842 406 aaKnown RBP7.23□□□□□ -1.25
CSMD2-201ENST00000241312 TERF2Q15554 542 aa7.23□□□□□ -1.25
CSMD2-201ENST00000241312 CAPRIN2Q6IMN6 1127 aaKnown RBP7.23□□□□□ -1.25
CSMD2-201ENST00000241312 ARHGEF25Q86VW2 580 aa7.23□□□□□ -1.25
CSMD2-201ENST00000241312 ZNF577Q9BSK1 485 aa7.23□□□□□ -1.25
CSMD2-201ENST00000241312 LGR6Q9HBX8 967 aa7.23□□□□□ -1.25
CSMD2-201ENST00000241312 MMP1P03956 469 aa7.23□□□□□ -1.25
CSMD2-201ENST00000241312 NT5C2P49902 561 aa7.23□□□□□ -1.25
CSMD2-201ENST00000241312 FRA10AC1Q70Z53 315 aa7.23□□□□□ -1.25
CSMD2-201ENST00000241312 PALMDQ9NP74 551 aa7.23□□□□□ -1.25
CSMD2-201ENST00000241312 GRID2IPA4D2P6 1211 aa7.23□□□□□ -1.25
CSMD2-201ENST00000241312 COPEO14579 308 aa7.23□□□□□ -1.25
CSMD2-201ENST00000241312 NUDCD3Q8IVD9 361 aa7.23□□□□□ -1.25
CSMD2-201ENST00000241312 ICA1LQ8NDH6 482 aa7.23□□□□□ -1.25
CSMD2-201ENST00000241312 PI4K2BQ8TCG2 481 aa7.23□□□□□ -1.25
CSMD2-201ENST00000241312 SAAL1Q96ER3 474 aa7.23□□□□□ -1.25
CSMD2-201ENST00000241312 STRIP2Q9ULQ0 834 aa7.23□□□□□ -1.25
CSMD2-201ENST00000241312 BCAMP50895 628 aa7.23□□□□□ -1.25
CSMD2-201ENST00000241312 CCNA1P78396 465 aa7.23□□□□□ -1.25
CSMD2-201ENST00000241312 DRP2Q13474 957 aa7.23□□□□□ -1.25
CSMD2-201ENST00000241312 SLFN13Q68D06 897 aa7.23□□□□□ -1.25
CSMD2-201ENST00000241312 WDR75Q8IWA0 830 aaKnown RBP7.23□□□□□ -1.25
CSMD2-201ENST00000241312 PROM2Q8N271 834 aa7.23□□□□□ -1.25
CSMD2-201ENST00000241312 GPBP1L1Q9HC44 474 aaPredicted RBP7.23□□□□□ -1.25
CSMD2-201ENST00000241312 NOVA2Q9UNW9 492 aaKnown RBP7.23□□□□□ -1.25
CSMD2-201ENST00000241312 YEATS2Q9ULM3 1422 aa7.23□□□□□ -1.25
CSMD2-201ENST00000241312 ARHGEF5Q12774 1597 aa7.23□□□□□ -1.25
CSMD2-201ENST00000241312 GTPBP10A4D1E9 387 aaKnown RBP7.23□□□□□ -1.25
CSMD2-201ENST00000241312 LGALS16A8MUM7 142 aa7.23□□□□□ -1.25
CSMD2-201ENST00000241312 MAP3K7CLP57077 242 aa7.23□□□□□ -1.25
CSMD2-201ENST00000241312 TMEM259Q4ZIN3 620 aa7.23□□□□□ -1.25
CSMD2-201ENST00000241312 METTL23Q86XA0 190 aa7.23□□□□□ -1.25
CSMD2-201ENST00000241312 DDX17Q92841 729 aaKnown RBP7.23□□□□□ -1.25
CSMD2-201ENST00000241312 CCDC17Q96LX7 622 aa7.23□□□□□ -1.25
CSMD2-201ENST00000241312 TGS1Q96RS0 853 aaKnown RBP7.23□□□□□ -1.25
CSMD2-201ENST00000241312 COPRSQ9NQ92 184 aa7.23□□□□□ -1.25
CSMD2-201ENST00000241312 POTEB3A0JP26 581 aa7.22□□□□□ -1.25
CSMD2-201ENST00000241312 PLCG1P19174 1290 aa7.22□□□□□ -1.25
CSMD2-201ENST00000241312 POTEBQ6S5H4 581 aa7.22□□□□□ -1.25
CSMD2-201ENST00000241312 GRAMD1CQ8IYS0 662 aa7.22□□□□□ -1.25
CSMD2-201ENST00000241312 SDR42E1Q8WUS8 393 aa7.22□□□□□ -1.25
CSMD2-201ENST00000241312 EAF2Q96CJ1 260 aaPredicted RBP7.22□□□□□ -1.25
CSMD2-201ENST00000241312 PAGR1Q9BTK6 254 aa7.22□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 66.8 ms