RNA–Protein interactions for RNA: ENST00000240185.7

TARDBP-201, Transcript of TAR DNA binding protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TARDBP, Length 5,367 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-201ENST00000240185 PRPSAP2O60256 369 aa14.84□□□□□ -0.03
TARDBP-201ENST00000240185 SEC24DO94855 1032 aaPredicted RBP14.84□□□□□ -0.03
TARDBP-201ENST00000240185 XPAP23025 273 aaPredicted RBP14.84□□□□□ -0.03
TARDBP-201ENST00000240185 PMLP29590 882 aa14.84□□□□□ -0.03
TARDBP-201ENST00000240185 PMS2P54278 862 aa14.84□□□□□ -0.03
TARDBP-201ENST00000240185 RINLQ6ZS11 566 aa14.84□□□□□ -0.03
TARDBP-201ENST00000240185 DHX38Q92620 1227 aaKnown RBP14.84□□□□□ -0.03
TARDBP-201ENST00000240185 FAM81BQ96LP2 452 aa14.84□□□□□ -0.03
TARDBP-201ENST00000240185 PALMO75781 387 aa14.84□□□□□ -0.03
TARDBP-201ENST00000240185 CACNB1Q02641 598 aaPredicted RBP14.84□□□□□ -0.03
TARDBP-201ENST00000240185 DRP2Q13474 957 aa14.84□□□□□ -0.03
TARDBP-201ENST00000240185 CYLC2Q14093 348 aaPredicted RBP14.84□□□□□ -0.03
TARDBP-201ENST00000240185 BTNL9Q6UXG8 535 aa14.84□□□□□ -0.03
TARDBP-201ENST00000240185 LONP2Q86WA8 852 aa14.84□□□□□ -0.03
TARDBP-201ENST00000240185 RHOT2Q8IXI1 618 aa14.84□□□□□ -0.03
TARDBP-201ENST00000240185 FAF2Q96CS3 445 aa14.84□□□□□ -0.03
TARDBP-201ENST00000240185 STMN3Q9NZ72 180 aa14.84□□□□□ -0.03
TARDBP-201ENST00000240185 GAP43P17677 238 aa14.84□□□□□ -0.03
TARDBP-201ENST00000240185 SERPINB3P29508 390 aa14.84□□□□□ -0.03
TARDBP-201ENST00000240185 GNL1P36915 607 aaPredicted RBP14.84□□□□□ -0.03
TARDBP-201ENST00000240185 EFTUD2Q15029 972 aaKnown RBP eCLIP14.84□□□□□ -0.03
TARDBP-201ENST00000240185 CNGA3Q16281 694 aa14.84□□□□□ -0.03
TARDBP-201ENST00000240185 SPOUT1Q5T280 376 aaKnown RBP14.84□□□□□ -0.03
TARDBP-201ENST00000240185 CDR2LQ86X02 465 aaPredicted RBP14.84□□□□□ -0.03
TARDBP-201ENST00000240185 CNBD1Q8NA66 436 aa14.84□□□□□ -0.03
TARDBP-201ENST00000240185 SUPT20HQ8NEM7 779 aa14.84□□□□□ -0.03
TARDBP-201ENST00000240185 CDV3Q9UKY7 258 aaKnown RBP14.84□□□□□ -0.03
TARDBP-201ENST00000240185 A0A1B0GW55 424 aa14.83□□□□□ -0.03
TARDBP-201ENST00000240185 ANO9A1A5B4 782 aa14.83□□□□□ -0.03
TARDBP-201ENST00000240185 TLR3O15455 904 aaKnown RBP14.83□□□□□ -0.03
TARDBP-201ENST00000240185 DUX4L2P0CJ85 424 aa14.83□□□□□ -0.03
TARDBP-201ENST00000240185 DUX4L3P0CJ86 424 aa14.83□□□□□ -0.03
TARDBP-201ENST00000240185 DUX4L4P0CJ87 422 aa14.83□□□□□ -0.03
TARDBP-201ENST00000240185 DUX4L5P0CJ88 424 aa14.83□□□□□ -0.03
TARDBP-201ENST00000240185 DUX4L6P0CJ89 424 aa14.83□□□□□ -0.03
TARDBP-201ENST00000240185 DUX4L7P0CJ90 424 aa14.83□□□□□ -0.03
TARDBP-201ENST00000240185 KCNA3P22001 575 aa14.83□□□□□ -0.03
TARDBP-201ENST00000240185 LRRC8BQ6P9F7 803 aa14.83□□□□□ -0.03
TARDBP-201ENST00000240185 ADCK1Q86TW2 530 aa14.83□□□□□ -0.03
TARDBP-201ENST00000240185 CNPY4Q8N129 248 aa14.83□□□□□ -0.03
TARDBP-201ENST00000240185 MB21D1Q8N884 522 aa14.83□□□□□ -0.03
TARDBP-201ENST00000240185 NSUN7Q8NE18 718 aaKnown RBP14.83□□□□□ -0.03
TARDBP-201ENST00000240185 EPC1Q9H2F5 836 aa14.83□□□□□ -0.03
TARDBP-201ENST00000240185 DUX4Q9UBX2 424 aa14.83□□□□□ -0.03
TARDBP-201ENST00000240185 DIS3Q9Y2L1 958 aaKnown RBP14.83□□□□□ -0.03
TARDBP-201ENST00000240185 ESYT3A0FGR9 886 aa14.83□□□□□ -0.04
TARDBP-201ENST00000240185 SORBS3O60504 671 aa14.83□□□□□ -0.04
TARDBP-201ENST00000240185 MYL1P05976 194 aa14.83□□□□□ -0.04
TARDBP-201ENST00000240185 TJAP1Q5JTD0 557 aa14.83□□□□□ -0.04
TARDBP-201ENST00000240185 PRPF38AQ8NAV1 312 aaKnown RBP14.83□□□□□ -0.04
TARDBP-201ENST00000240185 CATSPER1Q8NEC5 780 aa14.83□□□□□ -0.04
TARDBP-201ENST00000240185 EAF2Q96CJ1 260 aaPredicted RBP14.83□□□□□ -0.04
TARDBP-201ENST00000240185 TEX12Q9BXU0 123 aa14.83□□□□□ -0.04
TARDBP-201ENST00000240185 CCDC195A0A1B0GUA6 201 aa14.83□□□□□ -0.04
TARDBP-201ENST00000240185 CD2BP2O95400 341 aaKnown RBP14.83□□□□□ -0.04
TARDBP-201ENST00000240185 ANP32DO95626 131 aa14.83□□□□□ -0.04
TARDBP-201ENST00000240185 VCAM1P19320 739 aa14.83□□□□□ -0.04
TARDBP-201ENST00000240185 PGM1P36871 562 aa14.83□□□□□ -0.04
TARDBP-201ENST00000240185 MAP3K10Q02779 954 aa14.83□□□□□ -0.04
TARDBP-201ENST00000240185 TMEM154Q6P9G4 183 aa14.83□□□□□ -0.04
TARDBP-201ENST00000240185 EP400NLQ6ZTU2 488 aa14.83□□□□□ -0.04
TARDBP-201ENST00000240185 DTX3LQ8TDB6 740 aa14.83□□□□□ -0.04
TARDBP-201ENST00000240185 SDR42E1Q8WUS8 393 aa14.83□□□□□ -0.04
TARDBP-201ENST00000240185 CARD14Q9BXL6 1004 aa14.83□□□□□ -0.04
TARDBP-201ENST00000240185 NEUROG2Q9H2A3 272 aa14.83□□□□□ -0.04
TARDBP-201ENST00000240185 ZMYM3Q14202 1370 aa14.83□□□□□ -0.04
TARDBP-201ENST00000240185 PTPREP23469 700 aa14.83□□□□□ -0.04
TARDBP-201ENST00000240185 COPS2P61201 443 aa14.83□□□□□ -0.04
TARDBP-201ENST00000240185 KRT26Q7Z3Y9 468 aa14.83□□□□□ -0.04
TARDBP-201ENST00000240185 FBXO11Q86XK2 927 aa14.83□□□□□ -0.04
TARDBP-201ENST00000240185 LSG1Q9H089 658 aaKnown RBP14.83□□□□□ -0.04
TARDBP-201ENST00000240185 VPS11Q9H270 941 aa14.83□□□□□ -0.04
TARDBP-201ENST00000240185 MRPL11Q9Y3B7 192 aaKnown RBP14.83□□□□□ -0.04
TARDBP-201ENST00000240185 ALAS1P13196 640 aa14.82□□□□□ -0.04
TARDBP-201ENST00000240185 GUCY1A3Q02108 690 aa14.82□□□□□ -0.04
TARDBP-201ENST00000240185 TAGAPQ8N103 731 aa14.82□□□□□ -0.04
TARDBP-201ENST00000240185 GRAMD1AQ96CP6 724 aa14.82□□□□□ -0.04
TARDBP-201ENST00000240185 PCIF1Q9H4Z3 704 aa14.82□□□□□ -0.04
TARDBP-201ENST00000240185 ERBB4Q15303 1308 aa14.82□□□□□ -0.04
TARDBP-201ENST00000240185 MED23Q9ULK4 1368 aa14.82□□□□□ -0.04
TARDBP-201ENST00000240185 ZFYVE9O95405 1425 aa14.82□□□□□ -0.04
TARDBP-201ENST00000240185 ERFP50548 548 aa14.82□□□□□ -0.04
TARDBP-201ENST00000240185 KIF23Q02241 960 aaPredicted RBP14.82□□□□□ -0.04
TARDBP-201ENST00000240185 KLHL38Q2WGJ6 581 aa14.82□□□□□ -0.04
TARDBP-201ENST00000240185 SNRNP27Q8WVK2 155 aaKnown RBP14.82□□□□□ -0.04
TARDBP-201ENST00000240185 PNMA2Q9UL42 364 aa14.82□□□□□ -0.04
TARDBP-201ENST00000240185 DMRT2Q9Y5R5 561 aa14.82□□□□□ -0.04
TARDBP-201ENST00000240185 SYNGAP1Q96PV0 1343 aa14.82□□□□□ -0.04
TARDBP-201ENST00000240185 RNF123Q5XPI4 1314 aa14.82□□□□□ -0.04
TARDBP-201ENST00000240185 TRAF7Q6Q0C0 670 aa14.82□□□□□ -0.04
TARDBP-201ENST00000240185 LRRC47Q8N1G4 583 aaKnown RBP14.82□□□□□ -0.04
TARDBP-201ENST00000240185 SSH3Q8TE77 659 aa14.82□□□□□ -0.04
TARDBP-201ENST00000240185 MAP4K1Q92918 833 aa14.82□□□□□ -0.04
TARDBP-201ENST00000240185 CCDC22O60826 627 aa14.82□□□□□ -0.04
TARDBP-201ENST00000240185 HIC1Q14526 733 aa14.82□□□□□ -0.04
TARDBP-201ENST00000240185 OR6B2Q6IFH4 312 aa14.82□□□□□ -0.04
TARDBP-201ENST00000240185 SARM1Q6SZW1 724 aa14.82□□□□□ -0.04
TARDBP-201ENST00000240185 TEX9Q8N6V9 391 aa14.82□□□□□ -0.04
TARDBP-201ENST00000240185 ASPSCR1Q9BZE9 553 aa14.82□□□□□ -0.04
TARDBP-201ENST00000240185 ADNPQ9H2P0 1102 aa14.82□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms