RNA–Protein interactions for RNA: ENST00000237289.8

TNFAIP3-201, Transcript of TNF alpha induced protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFAIP3, Length 4,432 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-201ENST00000237289 POLR3CQ9BUI4 534 aaPredicted RBP12.37□□□□□ -0.43
TNFAIP3-201ENST00000237289 COL4A3BPQ9Y5P4 624 aa12.37□□□□□ -0.43
TNFAIP3-201ENST00000237289 SLC26A4O43511 780 aa12.36□□□□□ -0.43
TNFAIP3-201ENST00000237289 TFDP1Q14186 410 aa12.36□□□□□ -0.43
TNFAIP3-201ENST00000237289 PPP2R5AQ15172 486 aa12.36□□□□□ -0.43
TNFAIP3-201ENST00000237289 PADI6Q6TGC4 694 aa12.36□□□□□ -0.43
TNFAIP3-201ENST00000237289 ZBTB8OSQ8IWT0 167 aa12.36□□□□□ -0.43
TNFAIP3-201ENST00000237289 MCPH1Q8NEM0 835 aa12.36□□□□□ -0.43
TNFAIP3-201ENST00000237289 HAS1Q92839 578 aa12.36□□□□□ -0.43
TNFAIP3-201ENST00000237289 BLZF1Q9H2G9 400 aa12.36□□□□□ -0.43
TNFAIP3-201ENST00000237289 SLFN14P0C7P3 912 aa12.36□□□□□ -0.43
TNFAIP3-201ENST00000237289 ZNF286BP0CG31 522 aa12.36□□□□□ -0.43
TNFAIP3-201ENST00000237289 STRN3Q13033 797 aa12.36□□□□□ -0.43
TNFAIP3-201ENST00000237289 POSTNQ15063 836 aa12.36□□□□□ -0.43
TNFAIP3-201ENST00000237289 ETNPPLQ8TBG4 499 aa12.36□□□□□ -0.43
TNFAIP3-201ENST00000237289 TCP11Q8WWU5 503 aa12.36□□□□□ -0.43
TNFAIP3-201ENST00000237289 ATP6V0A4Q9HBG4 840 aa12.36□□□□□ -0.43
TNFAIP3-201ENST00000237289 IGLV3-22A0A075B6J6 115 aa12.36□□□□□ -0.43
TNFAIP3-201ENST00000237289 RRN3P2A6NIE6 340 aa12.36□□□□□ -0.43
TNFAIP3-201ENST00000237289 NR1I2O75469 434 aa12.36□□□□□ -0.43
TNFAIP3-201ENST00000237289 CABYRO75952 493 aa12.36□□□□□ -0.43
TNFAIP3-201ENST00000237289 FARP2O94887 1054 aaPredicted RBP12.36□□□□□ -0.43
TNFAIP3-201ENST00000237289 EDNRBP24530 442 aa12.36□□□□□ -0.43
TNFAIP3-201ENST00000237289 DMP1Q13316 513 aaPredicted RBP12.36□□□□□ -0.43
TNFAIP3-201ENST00000237289 ITGB3BPQ13352 177 aaPredicted RBP12.36□□□□□ -0.43
TNFAIP3-201ENST00000237289 CATSPER3Q86XQ3 398 aa12.36□□□□□ -0.43
TNFAIP3-201ENST00000237289 DRC1Q96MC2 740 aa12.36□□□□□ -0.43
TNFAIP3-201ENST00000237289 ANO10Q9NW15 660 aa12.36□□□□□ -0.43
TNFAIP3-201ENST00000237289 ATAD5Q96QE3 1844 aa12.36□□□□□ -0.43
TNFAIP3-201ENST00000237289 ZNF646O15015 1829 aaPredicted RBP12.36□□□□□ -0.43
TNFAIP3-201ENST00000237289 LRRIQ4A6NIV6 560 aa12.36□□□□□ -0.43
TNFAIP3-201ENST00000237289 OATP04181 439 aa12.36□□□□□ -0.43
TNFAIP3-201ENST00000237289 HSPA8P11142 646 aaKnown RBP12.36□□□□□ -0.43
TNFAIP3-201ENST00000237289 SHC4Q6S5L8 630 aa12.36□□□□□ -0.43
TNFAIP3-201ENST00000237289 PPTC7Q8NI37 304 aa12.36□□□□□ -0.43
TNFAIP3-201ENST00000237289 KCNA2P16389 499 aa12.35□□□□□ -0.43
TNFAIP3-201ENST00000237289 KIAA0753Q2KHM9 967 aa12.35□□□□□ -0.43
TNFAIP3-201ENST00000237289 CNNM4Q6P4Q7 775 aa12.35□□□□□ -0.43
TNFAIP3-201ENST00000237289 KCTD17Q8N5Z5 321 aa12.35□□□□□ -0.43
TNFAIP3-201ENST00000237289 BBXQ8WY36 941 aaPredicted RBP12.35□□□□□ -0.43
TNFAIP3-201ENST00000237289 MRPL44Q9H9J2 332 aaKnown RBP12.35□□□□□ -0.43
TNFAIP3-201ENST00000237289 MAGEC2Q9UBF1 373 aaPredicted RBP12.35□□□□□ -0.43
TNFAIP3-201ENST00000237289 ADGRA2Q96PE1 1338 aa12.35□□□□□ -0.43
TNFAIP3-201ENST00000237289 C11orf97A0A1B0GVM6 126 aaPredicted RBP12.35□□□□□ -0.43
TNFAIP3-201ENST00000237289 MAGEB2O15479 319 aa12.35□□□□□ -0.43
TNFAIP3-201ENST00000237289 EYA4O95677 639 aa12.35□□□□□ -0.43
TNFAIP3-201ENST00000237289 LGALS2P05162 132 aa12.35□□□□□ -0.43
TNFAIP3-201ENST00000237289 CCND3P30281 292 aaPredicted RBP12.35□□□□□ -0.43
TNFAIP3-201ENST00000237289 HSDL1Q3SXM5 330 aa12.35□□□□□ -0.43
TNFAIP3-201ENST00000237289 CXCL17Q6UXB2 119 aa12.35□□□□□ -0.43
TNFAIP3-201ENST00000237289 RAD54LQ92698 747 aa12.35□□□□□ -0.43
TNFAIP3-201ENST00000237289 H0YCG3 227 aa12.35□□□□□ -0.43
TNFAIP3-201ENST00000237289 CCL5P13501 91 aa12.35□□□□□ -0.43
TNFAIP3-201ENST00000237289 GRIN1Q05586 938 aa12.35□□□□□ -0.43
TNFAIP3-201ENST00000237289 MTRQ99707 1265 aa12.35□□□□□ -0.43
TNFAIP3-201ENST00000237289 SH2D3AQ9BRG2 576 aa12.35□□□□□ -0.43
TNFAIP3-201ENST00000237289 ANKEF1Q9NU02 776 aa12.35□□□□□ -0.43
TNFAIP3-201ENST00000237289 GTPBP6O43824 516 aaPredicted RBP12.34□□□□□ -0.43
TNFAIP3-201ENST00000237289 ODR4Q5SWX8 454 aa12.34□□□□□ -0.43
TNFAIP3-201ENST00000237289 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.34□□□□□ -0.43
TNFAIP3-201ENST00000237289 HS2ST1Q7LGA3 356 aa12.34□□□□□ -0.43
TNFAIP3-201ENST00000237289 TRIM50Q86XT4 487 aa12.34□□□□□ -0.43
TNFAIP3-201ENST00000237289 FAM178BQ8IXR5 827 aa12.34□□□□□ -0.43
TNFAIP3-201ENST00000237289 TMEM87AQ8NBN3 555 aa12.34□□□□□ -0.43
TNFAIP3-201ENST00000237289 LENG1Q96BZ8 264 aaPredicted RBP12.34□□□□□ -0.43
TNFAIP3-201ENST00000237289 PANK4Q9NVE7 773 aa12.34□□□□□ -0.43
TNFAIP3-201ENST00000237289 TBC1D7Q9P0N9 293 aa12.34□□□□□ -0.43
TNFAIP3-201ENST00000237289 C17orf102A2RUQ5 167 aa12.34□□□□□ -0.43
TNFAIP3-201ENST00000237289 WNT7AO00755 349 aa12.34□□□□□ -0.43
TNFAIP3-201ENST00000237289 MUTP22033 750 aa12.34□□□□□ -0.43
TNFAIP3-201ENST00000237289 ATN1P54259 1190 aaPredicted RBP12.34□□□□□ -0.43
TNFAIP3-201ENST00000237289 APBB1IPQ7Z5R6 666 aaPredicted RBP12.34□□□□□ -0.43
TNFAIP3-201ENST00000237289 NLRP7Q8WX94 980 aa12.34□□□□□ -0.43
TNFAIP3-201ENST00000237289 PSPC1Q8WXF1 523 aaKnown RBP12.34□□□□□ -0.43
TNFAIP3-201ENST00000237289 SYCE3A1L190 88 aa12.34□□□□□ -0.43
TNFAIP3-201ENST00000237289 EML1O00423 815 aa12.34□□□□□ -0.43
TNFAIP3-201ENST00000237289 DGAT1O75907 488 aa12.34□□□□□ -0.43
TNFAIP3-201ENST00000237289 MFSD10Q14728 455 aa12.34□□□□□ -0.43
TNFAIP3-201ENST00000237289 C4orf19Q8IY42 314 aa12.34□□□□□ -0.43
TNFAIP3-201ENST00000237289 IGSF22Q8N9C0 903 aa12.34□□□□□ -0.43
TNFAIP3-201ENST00000237289 FLRT1Q9NZU1 646 aa12.34□□□□□ -0.43
TNFAIP3-201ENST00000237289 EXOC7Q9UPT5 735 aa12.34□□□□□ -0.43
TNFAIP3-201ENST00000237289 Q9Y3F1 56 aa12.34□□□□□ -0.43
TNFAIP3-201ENST00000237289 MED24O75448 989 aa12.34□□□□□ -0.43
TNFAIP3-201ENST00000237289 GCNT3O95395 438 aa12.34□□□□□ -0.43
TNFAIP3-201ENST00000237289 PSEN2P49810 448 aa12.34□□□□□ -0.43
TNFAIP3-201ENST00000237289 ZNF484Q5JVG2 852 aa12.34□□□□□ -0.43
TNFAIP3-201ENST00000237289 PLA2G4FQ68DD2 849 aa12.34□□□□□ -0.43
TNFAIP3-201ENST00000237289 USP49Q70CQ1 688 aa12.34□□□□□ -0.43
TNFAIP3-201ENST00000237289 ATP8B4Q8TF62 1192 aa12.34□□□□□ -0.43
TNFAIP3-201ENST00000237289 MBOAT7Q96N66 472 aa12.34□□□□□ -0.43
TNFAIP3-201ENST00000237289 SENP6Q9GZR1 1112 aaPredicted RBP12.34□□□□□ -0.43
TNFAIP3-201ENST00000237289 CACNB1Q02641 598 aaPredicted RBP12.33□□□□□ -0.44
TNFAIP3-201ENST00000237289 TRIM32Q13049 653 aa12.33□□□□□ -0.44
TNFAIP3-201ENST00000237289 LONRF3Q496Y0 759 aa12.33□□□□□ -0.44
TNFAIP3-201ENST00000237289 TIGD1Q96MW7 591 aa12.33□□□□□ -0.44
TNFAIP3-201ENST00000237289 GPR20Q99678 358 aa12.33□□□□□ -0.44
TNFAIP3-201ENST00000237289 UNC93B1Q9H1C4 597 aa12.33□□□□□ -0.44
TNFAIP3-201ENST00000237289 CLSTN2Q9H4D0 955 aa12.33□□□□□ -0.44
TNFAIP3-201ENST00000237289 DCDC2CA8MYV0 355 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms