RNA–Protein interactions for RNA: ENST00000230461.10

TMEM30A-201, Transcript of transmembrane protein 30A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM30A, Length 4,594 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM30A-201ENST00000230461 ADARB2Q9NS39 739 aaKnown RBP17.2■□□□□ 0.34
TMEM30A-201ENST00000230461 FAM217BQ9NTX9 383 aaPredicted RBP17.2■□□□□ 0.34
TMEM30A-201ENST00000230461 EIF4A3P38919 411 aaKnown RBP17.2■□□□□ 0.34
TMEM30A-201ENST00000230461 NBPF12Q5TAG4 269 aaPredicted RBP17.2■□□□□ 0.34
TMEM30A-201ENST00000230461 ZBTB33Q86T24 672 aa17.2■□□□□ 0.34
TMEM30A-201ENST00000230461 GMCL1P1Q8NEA9 526 aa17.2■□□□□ 0.34
TMEM30A-201ENST00000230461 MSTO1Q9BUK6 570 aa17.2■□□□□ 0.34
TMEM30A-201ENST00000230461 HESX1Q9UBX0 185 aa17.2■□□□□ 0.34
TMEM30A-201ENST00000230461 PARP4Q9UKK3 1724 aaKnown RBP17.2■□□□□ 0.34
TMEM30A-201ENST00000230461 ASB14A6NK59 587 aa17.2■□□□□ 0.34
TMEM30A-201ENST00000230461 KCNK3O14649 394 aa17.2■□□□□ 0.34
TMEM30A-201ENST00000230461 TOB1P50616 345 aaPredicted RBP17.2■□□□□ 0.34
TMEM30A-201ENST00000230461 FXR2P51116 673 aaKnown RBP eCLIP17.2■□□□□ 0.348e-8■■■□□ 16.6
TMEM30A-201ENST00000230461 HDXQ7Z353 690 aa17.2■□□□□ 0.34
TMEM30A-201ENST00000230461 PNMA8AQ86V59 439 aaPredicted RBP17.2■□□□□ 0.34
TMEM30A-201ENST00000230461 IFT20Q8IY31 132 aa17.2■□□□□ 0.34
TMEM30A-201ENST00000230461 LRRC45Q96CN5 670 aa17.2■□□□□ 0.34
TMEM30A-201ENST00000230461 UBE2TQ9NPD8 197 aaPredicted RBP17.2■□□□□ 0.34
TMEM30A-201ENST00000230461 BAZ2BQ9UIF8 2168 aaKnown RBP17.2■□□□□ 0.34
TMEM30A-201ENST00000230461 PCDHB4Q9Y5E5 795 aa17.2■□□□□ 0.34
TMEM30A-201ENST00000230461 GFPT2O94808 682 aa17.2■□□□□ 0.34
TMEM30A-201ENST00000230461 Q3C1V9 767 aa17.2■□□□□ 0.34
TMEM30A-201ENST00000230461 TTC16Q8NEE8 873 aa17.2■□□□□ 0.34
TMEM30A-201ENST00000230461 PSPC1Q8WXF1 523 aaKnown RBP17.2■□□□□ 0.34
TMEM30A-201ENST00000230461 DENND3A2RUS2 1198 aa17.19■□□□□ 0.34
TMEM30A-201ENST00000230461 NDUFA10O95299 355 aa17.19■□□□□ 0.34
TMEM30A-201ENST00000230461 POLR2BP30876 1174 aaKnown RBP17.19■□□□□ 0.34
TMEM30A-201ENST00000230461 SLC26A4O43511 780 aa17.19■□□□□ 0.34
TMEM30A-201ENST00000230461 ICAM1P05362 532 aa17.19■□□□□ 0.34
TMEM30A-201ENST00000230461 MAPK6Q16659 721 aa17.19■□□□□ 0.34
TMEM30A-201ENST00000230461 FKBP1CQ5VVH2 108 aa17.19■□□□□ 0.34
TMEM30A-201ENST00000230461 SLC35F6Q8N357 371 aa17.19■□□□□ 0.34
TMEM30A-201ENST00000230461 ACRBPQ8NEB7 543 aa17.19■□□□□ 0.34
TMEM30A-201ENST00000230461 RIT2Q99578 217 aa17.19■□□□□ 0.34
TMEM30A-201ENST00000230461 RHOBTB3O94955 611 aa17.19■□□□□ 0.34
TMEM30A-201ENST00000230461 LDHAP00338 332 aaKnown RBP17.19■□□□□ 0.34
TMEM30A-201ENST00000230461 RPS6P62753 249 aaKnown RBP17.19■□□□□ 0.34
TMEM30A-201ENST00000230461 SURF1Q15526 300 aa17.19■□□□□ 0.34
TMEM30A-201ENST00000230461 CCDC91Q7Z6B0 441 aa17.19■□□□□ 0.34
TMEM30A-201ENST00000230461 IL17RAQ96F46 866 aa17.19■□□□□ 0.34
TMEM30A-201ENST00000230461 MXRA8Q9BRK3 442 aa17.19■□□□□ 0.34
TMEM30A-201ENST00000230461 FAM49AQ9H0Q0 323 aaPredicted RBP17.19■□□□□ 0.34
TMEM30A-201ENST00000230461 SLIT2O94813 1529 aa17.19■□□□□ 0.34
TMEM30A-201ENST00000230461 ZEB2O60315 1214 aa17.18■□□□□ 0.34
TMEM30A-201ENST00000230461 EZRP15311 586 aaKnown RBP17.18■□□□□ 0.34
TMEM30A-201ENST00000230461 BACE1P56817 501 aa17.18■□□□□ 0.34
TMEM30A-201ENST00000230461 MAP2K1Q02750 393 aaPredicted RBP17.18■□□□□ 0.34
TMEM30A-201ENST00000230461 SESTD1Q86VW0 696 aa17.18■□□□□ 0.34
TMEM30A-201ENST00000230461 ADSSL1Q8N142 457 aa17.18■□□□□ 0.34
TMEM30A-201ENST00000230461 RNF34Q969K3 372 aa17.18■□□□□ 0.34
TMEM30A-201ENST00000230461 UTP11Q9Y3A2 253 aaKnown RBP17.18■□□□□ 0.34
TMEM30A-201ENST00000230461 ROBO1Q9Y6N7 1651 aa17.18■□□□□ 0.34
TMEM30A-201ENST00000230461 SMIM22K7EJ46 135 aa17.18■□□□□ 0.34
TMEM30A-201ENST00000230461 TLR3O15455 904 aaKnown RBP17.18■□□□□ 0.34
TMEM30A-201ENST00000230461 OSTNP61366 133 aa17.18■□□□□ 0.34
TMEM30A-201ENST00000230461 KCNH2Q12809 1159 aa17.18■□□□□ 0.34
TMEM30A-201ENST00000230461 KCNV1Q6PIU1 500 aa17.18■□□□□ 0.34
TMEM30A-201ENST00000230461 ZFPM1Q8IX07 1006 aa17.18■□□□□ 0.34
TMEM30A-201ENST00000230461 DPF2Q92785 391 aa17.18■□□□□ 0.34
TMEM30A-201ENST00000230461 RPS6KC1Q96S38 1066 aa17.18■□□□□ 0.34
TMEM30A-201ENST00000230461 PPP1R16BQ96T49 567 aa17.18■□□□□ 0.34
TMEM30A-201ENST00000230461 NHEJ1Q9H9Q4 299 aaPredicted RBP17.18■□□□□ 0.34
TMEM30A-201ENST00000230461 SERPING1P05155 500 aa17.18■□□□□ 0.34
TMEM30A-201ENST00000230461 TRIM31Q9BZY9 425 aa17.18■□□□□ 0.34
TMEM30A-201ENST00000230461 TLDC2A0PJX2 215 aa17.18■□□□□ 0.34
TMEM30A-201ENST00000230461 MYMKA6NI61 221 aa17.18■□□□□ 0.34
TMEM30A-201ENST00000230461 RPA1P27694 616 aa17.18■□□□□ 0.34
TMEM30A-201ENST00000230461 CYP27A1Q02318 531 aa17.18■□□□□ 0.34
TMEM30A-201ENST00000230461 POTEAQ6S8J7 498 aa17.18■□□□□ 0.34
TMEM30A-201ENST00000230461 HPS3Q969F9 1004 aa17.18■□□□□ 0.34
TMEM30A-201ENST00000230461 MTRQ99707 1265 aa17.18■□□□□ 0.34
TMEM30A-201ENST00000230461 MIS12Q9H081 205 aa17.18■□□□□ 0.34
TMEM30A-201ENST00000230461 NBPF3Q9H094 633 aa17.18■□□□□ 0.34
TMEM30A-201ENST00000230461 KIAA1586Q9HCI6 787 aa17.18■□□□□ 0.34
TMEM30A-201ENST00000230461 TEX33O43247 280 aa17.17■□□□□ 0.34
TMEM30A-201ENST00000230461 PTPROQ16827 1216 aa17.17■□□□□ 0.34
TMEM30A-201ENST00000230461 SPATA33Q96N06 139 aa17.17■□□□□ 0.34
TMEM30A-201ENST00000230461 CLDN3O15551 220 aa17.17■□□□□ 0.34
TMEM30A-201ENST00000230461 HIP1RO75146 1068 aa17.17■□□□□ 0.34
TMEM30A-201ENST00000230461 MAIP1Q8WWC4 291 aa17.17■□□□□ 0.34
TMEM30A-201ENST00000230461 VIL1P09327 827 aaKnown RBP17.17■□□□□ 0.34
TMEM30A-201ENST00000230461 YWHABP31946 246 aaKnown RBP17.17■□□□□ 0.34
TMEM30A-201ENST00000230461 STK4Q13043 487 aa17.17■□□□□ 0.34
TMEM30A-201ENST00000230461 ANKRD40Q6AI12 368 aa17.17■□□□□ 0.34
TMEM30A-201ENST00000230461 XRRA1Q6P2D8 792 aa17.17■□□□□ 0.34
TMEM30A-201ENST00000230461 CHST13Q8NET6 341 aa17.17■□□□□ 0.34
TMEM30A-201ENST00000230461 SPTLC3Q9NUV7 552 aa17.17■□□□□ 0.34
TMEM30A-201ENST00000230461 EHHADHQ08426 723 aa17.16■□□□□ 0.34
TMEM30A-201ENST00000230461 LONRF2Q1L5Z9 754 aa17.16■□□□□ 0.34
TMEM30A-201ENST00000230461 HAUS6Q7Z4H7 955 aa17.16■□□□□ 0.34
TMEM30A-201ENST00000230461 CCDC105Q8IYK2 499 aa17.16■□□□□ 0.34
TMEM30A-201ENST00000230461 THNSL1Q8IYQ7 743 aa17.16■□□□□ 0.34
TMEM30A-201ENST00000230461 PARP2Q9UGN5 583 aa17.16■□□□□ 0.34
TMEM30A-201ENST00000230461 ASIC3Q9UHC3 531 aa17.16■□□□□ 0.34
TMEM30A-201ENST00000230461 GOLGA6L7A0A1B0GV03 622 aa17.16■□□□□ 0.34
TMEM30A-201ENST00000230461 MAFGO15525 162 aa17.16■□□□□ 0.34
TMEM30A-201ENST00000230461 SLC25A27O95847 323 aa17.16■□□□□ 0.34
TMEM30A-201ENST00000230461 FMR1Q06787 632 aaKnown RBP eCLIP17.16■□□□□ 0.347e-7■■■□□ 14.8
TMEM30A-201ENST00000230461 ELOA2Q8IYF1 753 aaPredicted RBP17.16■□□□□ 0.34
TMEM30A-201ENST00000230461 STMN4Q9H169 189 aaPredicted RBP17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms