RNA–Protein interactions for RNA: ENST00000230085.12

SNX3-201, Transcript of sorting nexin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX3, Length 1,755 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-201ENST00000230085 GTF2A1P52655 376 aaPredicted RBP22.61■■□□□ 1.21
SNX3-201ENST00000230085 AMPD3Q01432 767 aa22.61■■□□□ 1.21
SNX3-201ENST00000230085 C2orf54Q08AI8 447 aa22.61■■□□□ 1.21
SNX3-201ENST00000230085 GRM4Q14833 912 aa22.61■■□□□ 1.21
SNX3-201ENST00000230085 USP17L2Q6R6M4 530 aa22.61■■□□□ 1.21
SNX3-201ENST00000230085 B4GALNT4Q76KP1 1039 aa22.61■■□□□ 1.21
SNX3-201ENST00000230085 YTHDF3Q7Z739 585 aaKnown RBP22.61■■□□□ 1.21
SNX3-201ENST00000230085 VCPKMTQ9H867 229 aa22.61■■□□□ 1.21
SNX3-201ENST00000230085 FAM169AQ9Y6X4 670 aa22.61■■□□□ 1.21
SNX3-201ENST00000230085 MYH10P35580 1976 aa22.61■■□□□ 1.21
SNX3-201ENST00000230085 CCDC194A0A1B0GVG4 234 aa22.61■■□□□ 1.21
SNX3-201ENST00000230085 TESPA1A2RU30 521 aaPredicted RBP22.61■■□□□ 1.21
SNX3-201ENST00000230085 F5H6K3 240 aa22.61■■□□□ 1.21
SNX3-201ENST00000230085 FGFR1OPO95684 399 aaKnown RBP22.61■■□□□ 1.21
SNX3-201ENST00000230085 MAP2K2P36507 400 aa22.61■■□□□ 1.21
SNX3-201ENST00000230085 KLRC3Q07444 240 aa22.61■■□□□ 1.21
SNX3-201ENST00000230085 ASTE1Q2TB18 679 aaPredicted RBP22.61■■□□□ 1.21
SNX3-201ENST00000230085 TREML2Q5T2D2 321 aa22.61■■□□□ 1.21
SNX3-201ENST00000230085 HAUS3Q68CZ6 603 aa22.61■■□□□ 1.21
SNX3-201ENST00000230085 ANKRD40Q6AI12 368 aa22.61■■□□□ 1.21
SNX3-201ENST00000230085 SND1Q7KZF4 910 aaKnown RBP eCLIP22.61■■□□□ 1.21
SNX3-201ENST00000230085 SYN2Q92777 582 aaPredicted RBP22.61■■□□□ 1.21
SNX3-201ENST00000230085 LZTS2Q9BRK4 669 aa22.61■■□□□ 1.21
SNX3-201ENST00000230085 NOC4LQ9BVI4 516 aaKnown RBP22.61■■□□□ 1.21
SNX3-201ENST00000230085 TMOD4Q9NZQ9 345 aa22.61■■□□□ 1.21
SNX3-201ENST00000230085 ARHGAP20Q9P2F6 1191 aa22.61■■□□□ 1.21
SNX3-201ENST00000230085 DMGDHQ9UI17 866 aaKnown RBP22.61■■□□□ 1.21
SNX3-201ENST00000230085 MTMR7Q9Y216 660 aa22.61■■□□□ 1.21
SNX3-201ENST00000230085 FASTKD5Q7L8L6 764 aaKnown RBP22.6■■□□□ 1.21
SNX3-201ENST00000230085 LRRC1Q9BTT6 524 aa22.6■■□□□ 1.21
SNX3-201ENST00000230085 NUCKS1Q9H1E3 243 aaKnown RBP22.6■■□□□ 1.21
SNX3-201ENST00000230085 GOPCQ9HD26 462 aa22.6■■□□□ 1.21
SNX3-201ENST00000230085 GDF3Q9NR23 364 aa22.6■■□□□ 1.21
SNX3-201ENST00000230085 LRWD1Q9UFC0 647 aa22.6■■□□□ 1.21
SNX3-201ENST00000230085 PCDHA6Q9UN73 950 aa22.6■■□□□ 1.21
SNX3-201ENST00000230085 PCDHA8Q9Y5H6 950 aa22.6■■□□□ 1.21
SNX3-201ENST00000230085 CAPN6Q9Y6Q1 641 aa22.6■■□□□ 1.21
SNX3-201ENST00000230085 PVALEFA0A1B0GWK0 134 aa22.59■■□□□ 1.21
SNX3-201ENST00000230085 GRID2IPA4D2P6 1211 aa22.59■■□□□ 1.21
SNX3-201ENST00000230085 BTBD19C9JJ37 291 aa22.59■■□□□ 1.21
SNX3-201ENST00000230085 ERLIN2O94905 339 aa22.59■■□□□ 1.21
SNX3-201ENST00000230085 USP8P40818 1118 aa22.59■■□□□ 1.21
SNX3-201ENST00000230085 TM4SF4P48230 202 aa22.59■■□□□ 1.21
SNX3-201ENST00000230085 KIF11P52732 1056 aa22.59■■□□□ 1.21
SNX3-201ENST00000230085 INHBEP58166 350 aa22.59■■□□□ 1.21
SNX3-201ENST00000230085 GPAT2Q6NUI2 795 aa22.59■■□□□ 1.21
SNX3-201ENST00000230085 IQCKQ8N0W5 287 aa22.59■■□□□ 1.21
SNX3-201ENST00000230085 PROCA1Q8NCQ7 364 aaPredicted RBP22.59■■□□□ 1.21
SNX3-201ENST00000230085 C12orf42Q96LP6 360 aa22.59■■□□□ 1.21
SNX3-201ENST00000230085 TMEM60Q9H2L4 133 aa22.59■■□□□ 1.21
SNX3-201ENST00000230085 RNF216Q9NWF9 866 aaPredicted RBP22.59■■□□□ 1.21
SNX3-201ENST00000230085 TFR2Q9UP52 801 aa22.59■■□□□ 1.21
SNX3-201ENST00000230085 DUSP10Q9Y6W6 482 aa22.59■■□□□ 1.21
SNX3-201ENST00000230085 IGF2BP3O00425 579 aaKnown RBP eCLIP22.58■■□□□ 1.21
SNX3-201ENST00000230085 ADAMTS3O15072 1205 aa22.58■■□□□ 1.21
SNX3-201ENST00000230085 VCAM1P19320 739 aa22.58■■□□□ 1.21
SNX3-201ENST00000230085 MTIF2P46199 727 aaKnown RBP22.58■■□□□ 1.21
SNX3-201ENST00000230085 SREBF2Q12772 1141 aa22.58■■□□□ 1.21
SNX3-201ENST00000230085 MAN2A1Q16706 1144 aa22.58■■□□□ 1.21
SNX3-201ENST00000230085 VWA3BQ502W6 1294 aa22.58■■□□□ 1.21
SNX3-201ENST00000230085 KDM7AQ6ZMT4 941 aa22.58■■□□□ 1.21
SNX3-201ENST00000230085 DEF6Q9H4E7 631 aa22.58■■□□□ 1.21
SNX3-201ENST00000230085 BARHL2Q9NY43 387 aa22.58■■□□□ 1.21
SNX3-201ENST00000230085 SYNPO2Q9UMS6 1093 aa22.58■■□□□ 1.21
SNX3-201ENST00000230085 MACROD2A1Z1Q3 448 aa22.58■■□□□ 1.2
SNX3-201ENST00000230085 HSF2BPO75031 334 aa22.58■■□□□ 1.2
SNX3-201ENST00000230085 NDUFB10O96000 172 aa22.58■■□□□ 1.2
SNX3-201ENST00000230085 PAFAH1B1P43034 410 aa22.58■■□□□ 1.2
SNX3-201ENST00000230085 CCT5P48643 541 aa22.58■■□□□ 1.2
SNX3-201ENST00000230085 CCDC96Q2M329 555 aa22.58■■□□□ 1.2
SNX3-201ENST00000230085 MCTP2Q6DN12 878 aa22.58■■□□□ 1.2
SNX3-201ENST00000230085 IFNL1Q8IU54 200 aa22.58■■□□□ 1.2
SNX3-201ENST00000230085 PNMA1Q8ND90 353 aa22.58■■□□□ 1.2
SNX3-201ENST00000230085 GMCL1P1Q8NEA9 526 aa22.58■■□□□ 1.2
SNX3-201ENST00000230085 BCAS4Q8TDM0 211 aa22.58■■□□□ 1.2
SNX3-201ENST00000230085 LRRC15Q8TF66 581 aa22.58■■□□□ 1.2
SNX3-201ENST00000230085 CES2O00748 559 aa22.57■■□□□ 1.2
SNX3-201ENST00000230085 CYP27A1Q02318 531 aa22.57■■□□□ 1.2
SNX3-201ENST00000230085 LRRC63Q05C16 580 aa22.57■■□□□ 1.2
SNX3-201ENST00000230085 PDE4DQ08499 809 aa22.57■■□□□ 1.2
SNX3-201ENST00000230085 KRT25Q7Z3Z0 450 aa22.57■■□□□ 1.2
SNX3-201ENST00000230085 CABP7Q86V35 215 aa22.57■■□□□ 1.2
SNX3-201ENST00000230085 GSPT2Q8IYD1 628 aaKnown RBP22.57■■□□□ 1.2
SNX3-201ENST00000230085 CNPY4Q8N129 248 aa22.57■■□□□ 1.2
SNX3-201ENST00000230085 LPAR1Q92633 364 aa22.57■■□□□ 1.2
SNX3-201ENST00000230085 STK17AQ9UEE5 414 aa22.57■■□□□ 1.2
SNX3-201ENST00000230085 AGTPBP1Q9UPW5 1226 aa22.57■■□□□ 1.2
SNX3-201ENST00000230085 LOC285556D6RIA3 1793 aa22.56■■□□□ 1.2
SNX3-201ENST00000230085 ZMYND10O75800 440 aa22.56■■□□□ 1.2
SNX3-201ENST00000230085 PLCG1P19174 1290 aa22.56■■□□□ 1.2
SNX3-201ENST00000230085 STK4Q13043 487 aa22.56■■□□□ 1.2
SNX3-201ENST00000230085 SLFN13Q68D06 897 aa22.56■■□□□ 1.2
SNX3-201ENST00000230085 IFT20Q8IY31 132 aa22.56■■□□□ 1.2
SNX3-201ENST00000230085 GUF1Q8N442 669 aaKnown RBP22.56■■□□□ 1.2
SNX3-201ENST00000230085 BAP1Q92560 729 aa22.56■■□□□ 1.2
SNX3-201ENST00000230085 TLR10Q9BXR5 811 aa22.56■■□□□ 1.2
SNX3-201ENST00000230085 ZMYND12Q9H0C1 365 aa22.56■■□□□ 1.2
SNX3-201ENST00000230085 A1CFQ9NQ94 594 aaKnown RBP22.56■■□□□ 1.2
SNX3-201ENST00000230085 BAZ2BQ9UIF8 2168 aaKnown RBP22.56■■□□□ 1.2
SNX3-201ENST00000230085 STXBP3O00186 592 aa22.55■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms