RNA–Protein interactions for RNA: ENST00000228827.7

GPN3-201, Transcript of GPN-loop GTPase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPN3, Length 1,468 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPN3-201ENST00000228827 TET1Q8NFU7 2136 aa16.11■□□□□ 0.17
GPN3-201ENST00000228827 LOC101059915A0A1B0GWI6 518 aaPredicted RBP16.11■□□□□ 0.17
GPN3-201ENST00000228827 MSH4O15457 936 aa16.11■□□□□ 0.17
GPN3-201ENST00000228827 CHMP2AO43633 222 aa16.11■□□□□ 0.17
GPN3-201ENST00000228827 PSAPP07602 524 aa16.11■□□□□ 0.17
GPN3-201ENST00000228827 SLC26A2P50443 739 aa16.11■□□□□ 0.17
GPN3-201ENST00000228827 USP11P51784 963 aa16.11■□□□□ 0.17
GPN3-201ENST00000228827 KRT76Q01546 638 aa16.11■□□□□ 0.17
GPN3-201ENST00000228827 ANKRD1Q15327 319 aa16.11■□□□□ 0.17
GPN3-201ENST00000228827 NPY5RQ15761 445 aa16.11■□□□□ 0.17
GPN3-201ENST00000228827 ZNF746Q6NUN9 644 aaPredicted RBP16.11■□□□□ 0.17
GPN3-201ENST00000228827 MTHFD1LQ6UB35 978 aa16.11■□□□□ 0.17
GPN3-201ENST00000228827 APBB2Q92870 758 aa16.11■□□□□ 0.17
GPN3-201ENST00000228827 GBF1Q92538 1859 aa16.11■□□□□ 0.17
GPN3-201ENST00000228827 M0R2N6 131 aa16.1■□□□□ 0.17
GPN3-201ENST00000228827 HBP1O60381 514 aa16.1■□□□□ 0.17
GPN3-201ENST00000228827 LARGE1O95461 756 aa16.1■□□□□ 0.17
GPN3-201ENST00000228827 TDP2O95551 362 aa16.1■□□□□ 0.17
GPN3-201ENST00000228827 ATP4AP20648 1035 aa16.1■□□□□ 0.17
GPN3-201ENST00000228827 KLRC1P26715 233 aa16.1■□□□□ 0.17
GPN3-201ENST00000228827 FBXO47Q5MNV8 452 aa16.1■□□□□ 0.17
GPN3-201ENST00000228827 SMAP1Q8IYB5 467 aaPredicted RBP16.1■□□□□ 0.17
GPN3-201ENST00000228827 DAGLBQ8NCG7 672 aa16.1■□□□□ 0.17
GPN3-201ENST00000228827 C22orf23Q9BZE7 217 aa16.1■□□□□ 0.17
GPN3-201ENST00000228827 GJB4Q9NTQ9 266 aa16.1■□□□□ 0.17
GPN3-201ENST00000228827 GABBR1Q9UBS5 961 aa16.1■□□□□ 0.17
GPN3-201ENST00000228827 PCDHA2Q9Y5H9 948 aa16.1■□□□□ 0.17
GPN3-201ENST00000228827 PCDHA10Q9Y5I2 948 aa16.1■□□□□ 0.17
GPN3-201ENST00000228827 M0QZ92 97 aa16.1■□□□□ 0.17
GPN3-201ENST00000228827 CTDNEP1O95476 244 aa16.1■□□□□ 0.17
GPN3-201ENST00000228827 NEK4P51957 841 aa16.1■□□□□ 0.17
GPN3-201ENST00000228827 NONOQ15233 471 aaKnown RBP eCLIP16.1■□□□□ 0.17
GPN3-201ENST00000228827 IER5Q5VY09 327 aa16.1■□□□□ 0.17
GPN3-201ENST00000228827 KRT40Q6A162 431 aa16.1■□□□□ 0.17
GPN3-201ENST00000228827 GALNT17Q6IS24 598 aa16.1■□□□□ 0.17
GPN3-201ENST00000228827 PHF20Q9BVI0 1012 aa16.1■□□□□ 0.17
GPN3-201ENST00000228827 ORC3Q9UBD5 711 aaPredicted RBP16.1■□□□□ 0.17
GPN3-201ENST00000228827 INSL6Q9Y581 213 aa16.1■□□□□ 0.17
GPN3-201ENST00000228827 MAFBQ9Y5Q3 323 aaPredicted RBP16.1■□□□□ 0.17
GPN3-201ENST00000228827 TRPV2Q9Y5S1 764 aa16.1■□□□□ 0.17
GPN3-201ENST00000228827 STK36Q9NRP7 1315 aa16.1■□□□□ 0.17
GPN3-201ENST00000228827 SMIM35A0A1B0GVV1 85 aa16.09■□□□□ 0.17
GPN3-201ENST00000228827 LINC01553A4QN01 128 aa16.09■□□□□ 0.17
GPN3-201ENST00000228827 WDR64B1ANS9 1081 aa16.09■□□□□ 0.17
GPN3-201ENST00000228827 GTPBP6O43824 516 aaPredicted RBP16.09■□□□□ 0.17
GPN3-201ENST00000228827 EIF5BO60841 1220 aaKnown RBP16.09■□□□□ 0.17
GPN3-201ENST00000228827 GAS7O60861 476 aa16.09■□□□□ 0.17
GPN3-201ENST00000228827 CD52P31358 61 aa16.09■□□□□ 0.17
GPN3-201ENST00000228827 GRB10Q13322 594 aa16.09■□□□□ 0.17
GPN3-201ENST00000228827 ME3Q16798 604 aa16.09■□□□□ 0.17
GPN3-201ENST00000228827 INF2Q27J81 1249 aa16.09■□□□□ 0.17
GPN3-201ENST00000228827 ZNF484Q5JVG2 852 aa16.09■□□□□ 0.17
GPN3-201ENST00000228827 LRCH2Q5VUJ6 765 aa16.09■□□□□ 0.17
GPN3-201ENST00000228827 TSHZ1Q6ZSZ6 1077 aa16.09■□□□□ 0.17
GPN3-201ENST00000228827 KRT25Q7Z3Z0 450 aa16.09■□□□□ 0.17
GPN3-201ENST00000228827 GDPD5Q8WTR4 605 aa16.09■□□□□ 0.17
GPN3-201ENST00000228827 SLC5A5Q92911 643 aa16.09■□□□□ 0.17
GPN3-201ENST00000228827 TOP1MTQ969P6 601 aa16.09■□□□□ 0.17
GPN3-201ENST00000228827 TEKT3Q9BXF9 490 aa16.09■□□□□ 0.17
GPN3-201ENST00000228827 UNC45AQ9H3U1 944 aa16.09■□□□□ 0.17
GPN3-201ENST00000228827 AGO3Q9H9G7 860 aaKnown RBP16.09■□□□□ 0.17
GPN3-201ENST00000228827 DISC1Q9NRI5 854 aa16.09■□□□□ 0.17
GPN3-201ENST00000228827 GINS2Q9Y248 185 aa16.09■□□□□ 0.17
GPN3-201ENST00000228827 MTCH2Q9Y6C9 303 aa16.09■□□□□ 0.17
GPN3-201ENST00000228827 RPLP2P05387 115 aaKnown RBP16.08■□□□□ 0.16
GPN3-201ENST00000228827 XBP1P17861 261 aa16.08■□□□□ 0.16
GPN3-201ENST00000228827 HTRA4P83105 476 aaPredicted RBP16.08■□□□□ 0.16
GPN3-201ENST00000228827 LETM2Q2VYF4 491 aa16.08■□□□□ 0.16
GPN3-201ENST00000228827 Q4G0T1 1027 aa16.08■□□□□ 0.16
GPN3-201ENST00000228827 FAM177A1Q8N128 213 aaPredicted RBP16.08■□□□□ 0.16
GPN3-201ENST00000228827 OXER1Q8TDS5 423 aa16.08■□□□□ 0.16
GPN3-201ENST00000228827 IL17RAQ96F46 866 aa16.08■□□□□ 0.16
GPN3-201ENST00000228827 TGS1Q96RS0 853 aaKnown RBP16.08■□□□□ 0.16
GPN3-201ENST00000228827 PPP1R16BQ96T49 567 aa16.08■□□□□ 0.16
GPN3-201ENST00000228827 YME1L1Q96TA2 773 aa16.08■□□□□ 0.16
GPN3-201ENST00000228827 RIT2Q99578 217 aa16.08■□□□□ 0.16
GPN3-201ENST00000228827 CHD7Q9P2D1 2997 aa16.07■□□□□ 0.16
GPN3-201ENST00000228827 COL1A2P08123 1366 aa16.07■□□□□ 0.16
GPN3-201ENST00000228827 PTPRSQ13332 1948 aa16.07■□□□□ 0.16
GPN3-201ENST00000228827 CYP3A7-CYP3A51PA0A087WV96 503 aa16.07■□□□□ 0.16
GPN3-201ENST00000228827 CCDC194A0A1B0GVG4 234 aa16.07■□□□□ 0.16
GPN3-201ENST00000228827 ZBTB42B2RXF5 422 aa16.07■□□□□ 0.16
GPN3-201ENST00000228827 CYP3A7P24462 503 aa16.07■□□□□ 0.16
GPN3-201ENST00000228827 FOSBP53539 338 aa16.07■□□□□ 0.16
GPN3-201ENST00000228827 ERVK-21P61565 698 aa16.07■□□□□ 0.16
GPN3-201ENST00000228827 SKIV2LQ15477 1246 aaKnown RBP16.07■□□□□ 0.16
GPN3-201ENST00000228827 KIAA0319LQ8IZA0 1049 aa16.07■□□□□ 0.16
GPN3-201ENST00000228827 NME8Q8N427 588 aa16.07■□□□□ 0.16
GPN3-201ENST00000228827 BBXQ8WY36 941 aaPredicted RBP16.07■□□□□ 0.16
GPN3-201ENST00000228827 GTF3C6Q969F1 213 aa16.07■□□□□ 0.16
GPN3-201ENST00000228827 C17orf80Q9BSJ5 609 aa16.07■□□□□ 0.16
GPN3-201ENST00000228827 COL25A1Q9BXS0 654 aaPredicted RBP16.07■□□□□ 0.16
GPN3-201ENST00000228827 CELF4Q9BZC1 486 aaKnown RBP16.07■□□□□ 0.16
GPN3-201ENST00000228827 DDX25Q9UHL0 483 aaKnown RBP16.07■□□□□ 0.16
GPN3-201ENST00000228827 UNC80Q8N2C7 3258 aa16.07■□□□□ 0.16
GPN3-201ENST00000228827 IGSF9BQ9UPX0 1349 aa16.06■□□□□ 0.16
GPN3-201ENST00000228827 ENPP3O14638 875 aa16.06■□□□□ 0.16
GPN3-201ENST00000228827 PSMD10O75832 226 aa16.06■□□□□ 0.16
GPN3-201ENST00000228827 C22orf31O95567 290 aa16.06■□□□□ 0.16
GPN3-201ENST00000228827 FDPSP14324 419 aaKnown RBP16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms