RNA–Protein interactions for RNA: ENST00000216456.6

VTI1B-201, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 1 (best)

Gene VTI1B, Length 1,103 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-201ENST00000216456 NIPA1Q7RTP0 329 aa25.17■■□□□ 1.62
VTI1B-201ENST00000216456 RTN4RL1Q86UN2 441 aaPredicted RBP25.17■■□□□ 1.62
VTI1B-201ENST00000216456 GLT8D2Q9H1C3 349 aa25.17■■□□□ 1.62
VTI1B-201ENST00000216456 ZSWIM6Q9HCJ5 1215 aa25.17■■□□□ 1.62
VTI1B-201ENST00000216456 IPO5O00410 1097 aaKnown RBP25.16■■□□□ 1.62
VTI1B-201ENST00000216456 PRR16Q569H4 304 aa25.16■■□□□ 1.62
VTI1B-201ENST00000216456 SWSAP1Q6NVH7 229 aa25.16■■□□□ 1.62
VTI1B-201ENST00000216456 MTHFD1LQ6UB35 978 aa25.16■■□□□ 1.62
VTI1B-201ENST00000216456 TSHZ1Q6ZSZ6 1077 aa25.16■■□□□ 1.62
VTI1B-201ENST00000216456 RUFY3Q7L099 469 aa25.16■■□□□ 1.62
VTI1B-201ENST00000216456 IL27Q8NEV9 243 aa25.16■■□□□ 1.62
VTI1B-201ENST00000216456 HLA-CQ95604 372 aa25.16■■□□□ 1.62
VTI1B-201ENST00000216456 GJA10Q969M2 543 aa25.16■■□□□ 1.62
VTI1B-201ENST00000216456 PPP1R16BQ96T49 567 aa25.16■■□□□ 1.62
VTI1B-201ENST00000216456 ZNF577Q9BSK1 485 aa25.16■■□□□ 1.62
VTI1B-201ENST00000216456 CDHR5Q9HBB8 845 aa25.16■■□□□ 1.62
VTI1B-201ENST00000216456 PCDHA2Q9Y5H9 948 aa25.16■■□□□ 1.62
VTI1B-201ENST00000216456 ZBTB42B2RXF5 422 aa25.15■■□□□ 1.62
VTI1B-201ENST00000216456 LINC00271P0C7V0 271 aa25.15■■□□□ 1.62
VTI1B-201ENST00000216456 IFNAR1P17181 557 aa25.15■■□□□ 1.62
VTI1B-201ENST00000216456 KLRC1P26715 233 aa25.15■■□□□ 1.62
VTI1B-201ENST00000216456 EVCP57679 992 aa25.15■■□□□ 1.62
VTI1B-201ENST00000216456 AKAP17AQ02040 695 aaKnown RBP25.15■■□□□ 1.62
VTI1B-201ENST00000216456 TMEM266Q2M3C6 531 aa25.15■■□□□ 1.62
VTI1B-201ENST00000216456 TEX2Q8IWB9 1127 aa25.15■■□□□ 1.62
VTI1B-201ENST00000216456 TMEM192Q8IY95 271 aa25.15■■□□□ 1.62
VTI1B-201ENST00000216456 LENG9Q96B70 501 aa25.15■■□□□ 1.62
VTI1B-201ENST00000216456 AIFM3Q96NN9 605 aa25.15■■□□□ 1.62
VTI1B-201ENST00000216456 RNF26Q9BY78 433 aaPredicted RBP25.15■■□□□ 1.62
VTI1B-201ENST00000216456 TRPV2Q9Y5S1 764 aa25.15■■□□□ 1.62
VTI1B-201ENST00000216456 STK3Q13188 491 aa25.14■■□□□ 1.62
VTI1B-201ENST00000216456 PDXDC2PQ6P474 469 aa25.14■■□□□ 1.62
VTI1B-201ENST00000216456 ATP8B4Q8TF62 1192 aa25.14■■□□□ 1.62
VTI1B-201ENST00000216456 IL17RAQ96F46 866 aa25.14■■□□□ 1.62
VTI1B-201ENST00000216456 RC3H2Q9HBD1 1191 aaKnown RBP25.14■■□□□ 1.62
VTI1B-201ENST00000216456 ZNF302Q9NR11 478 aa25.14■■□□□ 1.62
VTI1B-201ENST00000216456 GINS2Q9Y248 185 aa25.14■■□□□ 1.62
VTI1B-201ENST00000216456 COL4A6Q14031 1691 aa25.13■■□□□ 1.61
VTI1B-201ENST00000216456 CSPG5O95196 566 aa25.13■■□□□ 1.61
VTI1B-201ENST00000216456 IBSPP21815 317 aaPredicted RBP25.13■■□□□ 1.61
VTI1B-201ENST00000216456 GPM6BQ13491 265 aa25.13■■□□□ 1.61
VTI1B-201ENST00000216456 TMX1Q9H3N1 280 aa25.13■■□□□ 1.61
VTI1B-201ENST00000216456 LMCD1Q9NZU5 365 aa25.13■■□□□ 1.61
VTI1B-201ENST00000216456 PADI3Q9ULW8 664 aa25.13■■□□□ 1.61
VTI1B-201ENST00000216456 COG5Q9UP83 839 aa25.13■■□□□ 1.61
VTI1B-201ENST00000216456 BRWD1Q9NSI6 2320 aa25.12■■□□□ 1.61
VTI1B-201ENST00000216456 GNA11P29992 359 aa25.12■■□□□ 1.61
VTI1B-201ENST00000216456 GATMP50440 423 aa25.12■■□□□ 1.61
VTI1B-201ENST00000216456 IER5Q5VY09 327 aa25.12■■□□□ 1.61
VTI1B-201ENST00000216456 CCDC12Q8WUD4 166 aaPredicted RBP25.12■■□□□ 1.61
VTI1B-201ENST00000216456 CELF4Q9BZC1 486 aaKnown RBP25.12■■□□□ 1.61
VTI1B-201ENST00000216456 SMIM35A0A1B0GVV1 85 aa25.11■■□□□ 1.61
VTI1B-201ENST00000216456 H3BNC9 293 aa25.11■■□□□ 1.61
VTI1B-201ENST00000216456 HBP1O60381 514 aa25.11■■□□□ 1.61
VTI1B-201ENST00000216456 FAM160B1Q5W0V3 765 aa25.11■■□□□ 1.61
VTI1B-201ENST00000216456 MIS18BP1Q6P0N0 1132 aa25.11■■□□□ 1.61
VTI1B-201ENST00000216456 KIAA0319LQ8IZA0 1049 aa25.11■■□□□ 1.61
VTI1B-201ENST00000216456 FIBCD1Q8N539 461 aa25.11■■□□□ 1.61
VTI1B-201ENST00000216456 TMEM40Q8WWA1 233 aa25.11■■□□□ 1.61
VTI1B-201ENST00000216456 CYP46A1Q9Y6A2 500 aa25.11■■□□□ 1.61
VTI1B-201ENST00000216456 IGSF9BQ9UPX0 1349 aa25.11■■□□□ 1.61
VTI1B-201ENST00000216456 CIITAP33076 1130 aa25.1■■□□□ 1.61
VTI1B-201ENST00000216456 CTNNB1P35222 781 aa25.1■■□□□ 1.61
VTI1B-201ENST00000216456 NLRP5P59047 1200 aa25.1■■□□□ 1.61
VTI1B-201ENST00000216456 KRT76Q01546 638 aa25.1■■□□□ 1.61
VTI1B-201ENST00000216456 AAK1Q2M2I8 961 aa25.1■■□□□ 1.61
VTI1B-201ENST00000216456 CKAP2LQ8IYA6 745 aa25.1■■□□□ 1.61
VTI1B-201ENST00000216456 MRPL38Q96DV4 380 aaKnown RBP25.1■■□□□ 1.61
VTI1B-201ENST00000216456 GABBR1Q9UBS5 961 aa25.1■■□□□ 1.61
VTI1B-201ENST00000216456 LOXHD1Q8IVV2 1947 aa25.1■■□□□ 1.61
VTI1B-201ENST00000216456 ADGRA3Q8IWK6 1321 aa25.1■■□□□ 1.61
VTI1B-201ENST00000216456 MSH4O15457 936 aa25.09■■□□□ 1.61
VTI1B-201ENST00000216456 MGEA5O60502 916 aa25.09■■□□□ 1.61
VTI1B-201ENST00000216456 SLC26A2P50443 739 aa25.09■■□□□ 1.61
VTI1B-201ENST00000216456 SETQ01105 290 aaPredicted RBP25.09■■□□□ 1.61
VTI1B-201ENST00000216456 CRIPAKQ8N1N5 446 aa25.09■■□□□ 1.61
VTI1B-201ENST00000216456 CCDC148Q8NFR7 591 aa25.09■■□□□ 1.61
VTI1B-201ENST00000216456 ZNF689Q96CS4 500 aaPredicted RBP25.09■■□□□ 1.61
VTI1B-201ENST00000216456 UBE2ZQ9H832 354 aaPredicted RBP25.09■■□□□ 1.61
VTI1B-201ENST00000216456 NOC2LQ9Y3T9 749 aaKnown RBP25.09■■□□□ 1.61
VTI1B-201ENST00000216456 MAFBQ9Y5Q3 323 aaPredicted RBP25.09■■□□□ 1.61
VTI1B-201ENST00000216456 BDP1A6H8Y1 2624 aa25.09■■□□□ 1.61
VTI1B-201ENST00000216456 NLRC5Q86WI3 1866 aa25.09■■□□□ 1.61
VTI1B-201ENST00000216456 M0QZ92 97 aa25.08■■□□□ 1.61
VTI1B-201ENST00000216456 GRM6O15303 877 aa25.08■■□□□ 1.61
VTI1B-201ENST00000216456 CHMP2AO43633 222 aa25.08■■□□□ 1.61
VTI1B-201ENST00000216456 DGKIO75912 1065 aa25.08■■□□□ 1.61
VTI1B-201ENST00000216456 C22orf31O95567 290 aa25.08■■□□□ 1.61
VTI1B-201ENST00000216456 SSRP1Q08945 709 aaKnown RBP25.08■■□□□ 1.61
VTI1B-201ENST00000216456 PAK2Q13177 524 aa25.08■■□□□ 1.61
VTI1B-201ENST00000216456 NPY5RQ15761 445 aa25.08■■□□□ 1.61
VTI1B-201ENST00000216456 UGCGQ16739 394 aa25.08■■□□□ 1.61
VTI1B-201ENST00000216456 PAN2Q504Q3 1202 aaKnown RBP25.08■■□□□ 1.61
VTI1B-201ENST00000216456 TCEAL5Q5H9L2 206 aa25.08■■□□□ 1.61
VTI1B-201ENST00000216456 ZNF746Q6NUN9 644 aaPredicted RBP25.08■■□□□ 1.61
VTI1B-201ENST00000216456 SAMD11Q96NU1 681 aa25.08■■□□□ 1.61
VTI1B-201ENST00000216456 TBC1D22BQ9NU19 505 aa25.08■■□□□ 1.61
VTI1B-201ENST00000216456 TTC3P53804 2025 aa25.08■■□□□ 1.61
VTI1B-201ENST00000216456 MYO7AQ13402 2215 aa25.07■■□□□ 1.6
VTI1B-201ENST00000216456 ZNF862O60290 1169 aa25.07■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms