RNA–Protein interactions for RNA: ENST00000216414.12

CDKN3-201, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

TSL 1 (best)

Gene CDKN3, Length 373 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-201ENST00000216414 ALG1Q9BT22 464 aa4.46□□□□□ -1.7
CDKN3-201ENST00000216414 ZDHHC5Q9C0B5 715 aa4.46□□□□□ -1.7
CDKN3-201ENST00000216414 ZNF408Q9H9D4 720 aa4.46□□□□□ -1.7
CDKN3-201ENST00000216414 CDC42EP3Q9UKI2 254 aa4.46□□□□□ -1.7
CDKN3-201ENST00000216414 REXO2Q9Y3B8 237 aaKnown RBP4.46□□□□□ -1.7
CDKN3-201ENST00000216414 U2SURPO15042 1029 aaKnown RBP4.45□□□□□ -1.7
CDKN3-201ENST00000216414 PABPC1P11940 636 aaKnown RBP4.45□□□□□ -1.7
CDKN3-201ENST00000216414 PTPN1P18031 435 aaKnown RBP4.45□□□□□ -1.7
CDKN3-201ENST00000216414 MAKP20794 623 aa4.45□□□□□ -1.7
CDKN3-201ENST00000216414 IL13RA1P78552 427 aa4.45□□□□□ -1.7
CDKN3-201ENST00000216414 HHEXQ03014 270 aa4.45□□□□□ -1.7
CDKN3-201ENST00000216414 IFRD2Q12894 506 aaPredicted RBP4.45□□□□□ -1.7
CDKN3-201ENST00000216414 NFYCQ13952 458 aa4.45□□□□□ -1.7
CDKN3-201ENST00000216414 NSMFQ6X4W1 530 aa4.45□□□□□ -1.7
CDKN3-201ENST00000216414 EP400NLQ6ZTU2 488 aa4.45□□□□□ -1.7
CDKN3-201ENST00000216414 USP30Q70CQ3 517 aa4.45□□□□□ -1.7
CDKN3-201ENST00000216414 LARP4Q71RC2 724 aaKnown RBP eCLIP4.45□□□□□ -1.7
CDKN3-201ENST00000216414 OTOP2Q7RTS6 562 aa4.45□□□□□ -1.7
CDKN3-201ENST00000216414 LDLRAD3Q86YD5 345 aa4.45□□□□□ -1.7
CDKN3-201ENST00000216414 NLGN4XQ8N0W4 816 aa4.45□□□□□ -1.7
CDKN3-201ENST00000216414 HNRNPLLQ8WVV9 542 aaKnown RBP4.45□□□□□ -1.7
CDKN3-201ENST00000216414 LARP4BQ92615 738 aaKnown RBP4.45□□□□□ -1.7
CDKN3-201ENST00000216414 ZG16BQ96DA0 208 aa4.45□□□□□ -1.7
CDKN3-201ENST00000216414 SGSM3Q96HU1 749 aa4.45□□□□□ -1.7
CDKN3-201ENST00000216414 ARHGEF4Q9NR80 690 aa4.45□□□□□ -1.7
CDKN3-201ENST00000216414 FBXO10Q9UK96 956 aa4.45□□□□□ -1.7
CDKN3-201ENST00000216414 TCRBV5S4A2TA0A5A2 114 aa4.44□□□□□ -1.7
CDKN3-201ENST00000216414 IQCA1LA6NCM1 817 aa4.44□□□□□ -1.7
CDKN3-201ENST00000216414 FAM90A27PA6NNH2 459 aa4.44□□□□□ -1.7
CDKN3-201ENST00000216414 FGFR1P11362 822 aa4.44□□□□□ -1.7
CDKN3-201ENST00000216414 PDE6AP16499 860 aa4.44□□□□□ -1.7
CDKN3-201ENST00000216414 PTGS1P23219 599 aa4.44□□□□□ -1.7
CDKN3-201ENST00000216414 LMO1P25800 156 aa4.44□□□□□ -1.7
CDKN3-201ENST00000216414 DNAJA1P31689 397 aaKnown RBP4.44□□□□□ -1.7
CDKN3-201ENST00000216414 MEOX1P50221 254 aa4.44□□□□□ -1.7
CDKN3-201ENST00000216414 ATXN1P54253 815 aaKnown RBP4.44□□□□□ -1.7
CDKN3-201ENST00000216414 HNRNPA0Q13151 305 aaKnown RBP4.44□□□□□ -1.7
CDKN3-201ENST00000216414 GRM7Q14831 915 aa4.44□□□□□ -1.7
CDKN3-201ENST00000216414 FNDC7Q5VTL7 733 aa4.44□□□□□ -1.7
CDKN3-201ENST00000216414 FILIP1Q7Z7B0 1213 aa4.44□□□□□ -1.7
CDKN3-201ENST00000216414 RTKN2Q8IZC4 609 aa4.44□□□□□ -1.7
CDKN3-201ENST00000216414 CELF2-AS1Q8N7Q2 184 aa4.44□□□□□ -1.7
CDKN3-201ENST00000216414 CFHR4Q92496 578 aa4.44□□□□□ -1.7
CDKN3-201ENST00000216414 OSBP2Q969R2 916 aa4.44□□□□□ -1.7
CDKN3-201ENST00000216414 TMEM176AQ96HP8 235 aa4.44□□□□□ -1.7
CDKN3-201ENST00000216414 INCENPQ9NQS7 918 aa4.44□□□□□ -1.7
CDKN3-201ENST00000216414 PLA2G3Q9NZ20 509 aa4.44□□□□□ -1.7
CDKN3-201ENST00000216414 KIAA1522Q9P206 1035 aaPredicted RBP4.44□□□□□ -1.7
CDKN3-201ENST00000216414 SRPK3Q9UPE1 567 aa4.44□□□□□ -1.7
CDKN3-201ENST00000216414 TRAF6Q9Y4K3 522 aa4.44□□□□□ -1.7
CDKN3-201ENST00000216414 TRAV20A0A0B4J274 112 aa4.43□□□□□ -1.7
CDKN3-201ENST00000216414 PRAMEF25A6NGN4 478 aa4.43□□□□□ -1.7
CDKN3-201ENST00000216414 CAPN14A8MX76 684 aa4.43□□□□□ -1.7
CDKN3-201ENST00000216414 KRT15P19012 456 aa4.43□□□□□ -1.7
CDKN3-201ENST00000216414 ERCC5P28715 1186 aaPredicted RBP4.43□□□□□ -1.7
CDKN3-201ENST00000216414 MC4RP32245 332 aa4.43□□□□□ -1.7
CDKN3-201ENST00000216414 CRHR2Q13324 411 aa4.43□□□□□ -1.7
CDKN3-201ENST00000216414 GNL2Q13823 731 aaKnown RBP4.43□□□□□ -1.7
CDKN3-201ENST00000216414 PCOLCEQ15113 449 aa4.43□□□□□ -1.7
CDKN3-201ENST00000216414 KRTAP15-1Q3LI76 137 aa4.43□□□□□ -1.7
CDKN3-201ENST00000216414 YOD1Q5VVQ6 348 aaPredicted RBP4.43□□□□□ -1.7
CDKN3-201ENST00000216414 DPY19L2P1Q6NXN4 242 aa4.43□□□□□ -1.7
CDKN3-201ENST00000216414 ARHGAP36Q6ZRI8 547 aa4.43□□□□□ -1.7
CDKN3-201ENST00000216414 DPH6Q7L8W6 267 aa4.43□□□□□ -1.7
CDKN3-201ENST00000216414 MRGPRGQ86SM5 289 aa4.43□□□□□ -1.7
CDKN3-201ENST00000216414 MTDHQ86UE4 582 aaKnown RBP4.43□□□□□ -1.7
CDKN3-201ENST00000216414 D2HGDHQ8N465 521 aa4.43□□□□□ -1.7
CDKN3-201ENST00000216414 OR14K1Q8NGZ2 314 aa4.43□□□□□ -1.7
CDKN3-201ENST00000216414 WDR48Q8TAF3 677 aa4.43□□□□□ -1.7
CDKN3-201ENST00000216414 CLIP3Q96DZ5 547 aa4.43□□□□□ -1.7
CDKN3-201ENST00000216414 CATSPERZQ9NTU4 200 aa4.43□□□□□ -1.7
CDKN3-201ENST00000216414 AURKAIP1Q9NWT8 199 aaPredicted RBP4.43□□□□□ -1.7
CDKN3-201ENST00000216414 GALNT8Q9NY28 637 aa4.43□□□□□ -1.7
CDKN3-201ENST00000216414 FAM184BQ9ULE4 1060 aa4.43□□□□□ -1.7
CDKN3-201ENST00000216414 GIT1Q9Y2X7 761 aa4.43□□□□□ -1.7
CDKN3-201ENST00000216414 ATP23Q9Y6H3 246 aa4.43□□□□□ -1.7
CDKN3-201ENST00000216414 ASXL2Q76L83 1435 aa4.43□□□□□ -1.7
CDKN3-201ENST00000216414 MRE11P49959 708 aa4.42□□□□□ -1.7
CDKN3-201ENST00000216414 EIF4HQ15056 248 aaKnown RBP4.42□□□□□ -1.7
CDKN3-201ENST00000216414 GPR19Q15760 415 aa4.42□□□□□ -1.7
CDKN3-201ENST00000216414 DDR2Q16832 855 aa4.42□□□□□ -1.7
CDKN3-201ENST00000216414 ZNF627Q7L945 461 aa4.42□□□□□ -1.7
CDKN3-201ENST00000216414 CXXC5Q7LFL8 322 aaKnown RBP4.42□□□□□ -1.7
CDKN3-201ENST00000216414 PTRH1Q86Y79 214 aaKnown RBP4.42□□□□□ -1.7
CDKN3-201ENST00000216414 GPR135Q8IZ08 494 aa4.42□□□□□ -1.7
CDKN3-201ENST00000216414 NELFAQ9H3P2 528 aa4.42□□□□□ -1.7
CDKN3-201ENST00000216414 SLC2A4RGQ9NR83 387 aa4.42□□□□□ -1.7
CDKN3-201ENST00000216414 A0A0G2JNJ9 132 aa4.41□□□□□ -1.7
CDKN3-201ENST00000216414 MAN2B1O00754 1011 aa4.41□□□□□ -1.7
CDKN3-201ENST00000216414 RAMP2O60895 175 aa4.41□□□□□ -1.7
CDKN3-201ENST00000216414 FGRP09769 529 aa4.41□□□□□ -1.7
CDKN3-201ENST00000216414 PYGMP11217 842 aa4.41□□□□□ -1.7
CDKN3-201ENST00000216414 AOAHP28039 575 aa4.41□□□□□ -1.7
CDKN3-201ENST00000216414 GJA4P35212 333 aa4.41□□□□□ -1.7
CDKN3-201ENST00000216414 PAK1Q13153 545 aa4.41□□□□□ -1.7
CDKN3-201ENST00000216414 FIGNQ5HY92 759 aa4.41□□□□□ -1.7
CDKN3-201ENST00000216414 ANKS3Q6ZW76 656 aa4.41□□□□□ -1.7
CDKN3-201ENST00000216414 THEMISQ8N1K5 641 aaPredicted RBP4.41□□□□□ -1.7
CDKN3-201ENST00000216414 SHCBP1Q8NEM2 672 aa4.41□□□□□ -1.7
CDKN3-201ENST00000216414 FBXW5Q969U6 566 aa4.41□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms