RNA–Protein interactions for RNA: ENST00000216085.11

RHBDD3-201, Transcript of rhomboid domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RHBDD3, Length 1,794 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3-201ENST00000216085 C4orf19Q8IY42 314 aa22.61■■□□□ 1.21
RHBDD3-201ENST00000216085 RGL1Q9NZL6 768 aa22.61■■□□□ 1.21
RHBDD3-201ENST00000216085 SLITRK3O94933 977 aa22.6■■□□□ 1.21
RHBDD3-201ENST00000216085 PLCB4Q15147 1175 aa22.6■■□□□ 1.21
RHBDD3-201ENST00000216085 UGCGQ16739 394 aa22.6■■□□□ 1.21
RHBDD3-201ENST00000216085 OTUD6AQ7L8S5 288 aa22.6■■□□□ 1.21
RHBDD3-201ENST00000216085 CABP7Q86V35 215 aa22.6■■□□□ 1.21
RHBDD3-201ENST00000216085 KCTD17Q8N5Z5 321 aa22.6■■□□□ 1.21
RHBDD3-201ENST00000216085 PPFIA1Q13136 1202 aa22.59■■□□□ 1.21
RHBDD3-201ENST00000216085 CATSPER3Q86XQ3 398 aa22.59■■□□□ 1.21
RHBDD3-201ENST00000216085 CLIC6Q96NY7 704 aa22.59■■□□□ 1.21
RHBDD3-201ENST00000216085 CCDC39Q9UFE4 941 aa22.59■■□□□ 1.21
RHBDD3-201ENST00000216085 SEPT9Q9UHD8 586 aaPredicted RBP22.59■■□□□ 1.21
RHBDD3-201ENST00000216085 NRCAMQ92823 1304 aa22.59■■□□□ 1.21
RHBDD3-201ENST00000216085 GOLGA6L4A6NEF3 574 aa22.58■■□□□ 1.21
RHBDD3-201ENST00000216085 PP2D1A8MPX8 630 aa22.58■■□□□ 1.21
RHBDD3-201ENST00000216085 ARVCFO00192 962 aa22.58■■□□□ 1.21
RHBDD3-201ENST00000216085 LYPLA2O95372 231 aa22.58■■□□□ 1.21
RHBDD3-201ENST00000216085 SMIM10L2AP0DMW4 78 aa22.58■■□□□ 1.21
RHBDD3-201ENST00000216085 SMIM10L2BP0DMW5 78 aa22.58■■□□□ 1.21
RHBDD3-201ENST00000216085 GRIN1Q05586 938 aa22.58■■□□□ 1.21
RHBDD3-201ENST00000216085 ZRSR1Q15695 479 aaKnown RBP22.58■■□□□ 1.21
RHBDD3-201ENST00000216085 TRMT1LQ7Z2T5 733 aaKnown RBP22.58■■□□□ 1.21
RHBDD3-201ENST00000216085 SESTD1Q86VW0 696 aa22.58■■□□□ 1.21
RHBDD3-201ENST00000216085 CHAMP1Q96JM3 812 aa22.58■■□□□ 1.21
RHBDD3-201ENST00000216085 RNPEPQ9H4A4 650 aa22.58■■□□□ 1.21
RHBDD3-201ENST00000216085 PCDHA7Q9UN72 937 aa22.58■■□□□ 1.21
RHBDD3-201ENST00000216085 COL1A2P08123 1366 aa22.58■■□□□ 1.21
RHBDD3-201ENST00000216085 C17orf102A2RUQ5 167 aa22.58■■□□□ 1.2
RHBDD3-201ENST00000216085 RRN3P2A6NIE6 340 aa22.58■■□□□ 1.2
RHBDD3-201ENST00000216085 MED24O75448 989 aa22.58■■□□□ 1.2
RHBDD3-201ENST00000216085 YWHABP31946 246 aaKnown RBP22.58■■□□□ 1.2
RHBDD3-201ENST00000216085 ATN1P54259 1190 aaPredicted RBP22.58■■□□□ 1.2
RHBDD3-201ENST00000216085 C1orf53Q5VUE5 145 aa22.58■■□□□ 1.2
RHBDD3-201ENST00000216085 SLC39A5Q6ZMH5 540 aa22.58■■□□□ 1.2
RHBDD3-201ENST00000216085 GBP4Q96PP9 640 aa22.58■■□□□ 1.2
RHBDD3-201ENST00000216085 NACC1Q96RE7 527 aa22.58■■□□□ 1.2
RHBDD3-201ENST00000216085 DDX11L8A8MPP1 907 aa22.57■■□□□ 1.2
RHBDD3-201ENST00000216085 ZNF862O60290 1169 aa22.57■■□□□ 1.2
RHBDD3-201ENST00000216085 CDC25AP30304 524 aa22.57■■□□□ 1.2
RHBDD3-201ENST00000216085 ZNF484Q5JVG2 852 aa22.57■■□□□ 1.2
RHBDD3-201ENST00000216085 UBE2Q1Q7Z7E8 422 aa22.57■■□□□ 1.2
RHBDD3-201ENST00000216085 SYMPKQ92797 1274 aaKnown RBP22.57■■□□□ 1.2
RHBDD3-201ENST00000216085 HTATIP2Q9BUP3 242 aa22.57■■□□□ 1.2
RHBDD3-201ENST00000216085 CCSER1Q9C0I3 900 aa22.57■■□□□ 1.2
RHBDD3-201ENST00000216085 GDPD2Q9HCC8 539 aa22.57■■□□□ 1.2
RHBDD3-201ENST00000216085 FAM13BQ9NYF5 915 aa22.57■■□□□ 1.2
RHBDD3-201ENST00000216085 HDAC6Q9UBN7 1215 aa22.57■■□□□ 1.2
RHBDD3-201ENST00000216085 GTF2IRD1Q9UHL9 959 aa22.57■■□□□ 1.2
RHBDD3-201ENST00000216085 NOD1Q9Y239 953 aa22.57■■□□□ 1.2
RHBDD3-201ENST00000216085 PPME1Q9Y570 386 aa22.57■■□□□ 1.2
RHBDD3-201ENST00000216085 TLR3O15455 904 aaKnown RBP22.56■■□□□ 1.2
RHBDD3-201ENST00000216085 SPATA31C1P0DKV0 1188 aa22.56■■□□□ 1.2
RHBDD3-201ENST00000216085 GRIK4Q16099 956 aa22.56■■□□□ 1.2
RHBDD3-201ENST00000216085 ADALQ6DHV7 355 aa22.56■■□□□ 1.2
RHBDD3-201ENST00000216085 POTEGQ6S5H5 508 aa22.56■■□□□ 1.2
RHBDD3-201ENST00000216085 SLC43A3Q8NBI5 491 aa22.56■■□□□ 1.2
RHBDD3-201ENST00000216085 KIAA1024Q9UPX6 916 aa22.56■■□□□ 1.2
RHBDD3-201ENST00000216085 TCHHQ07283 1943 aa22.56■■□□□ 1.2
RHBDD3-201ENST00000216085 XRCC6P12956 609 aaKnown RBP eCLIP22.55■■□□□ 1.2
RHBDD3-201ENST00000216085 INSRRP14616 1297 aa22.55■■□□□ 1.2
RHBDD3-201ENST00000216085 ATP4AP20648 1035 aa22.55■■□□□ 1.2
RHBDD3-201ENST00000216085 SPECC1Q5M775 1068 aa22.55■■□□□ 1.2
RHBDD3-201ENST00000216085 ANKEF1Q9NU02 776 aa22.55■■□□□ 1.2
RHBDD3-201ENST00000216085 DDX19AQ9NUU7 478 aaKnown RBP22.55■■□□□ 1.2
RHBDD3-201ENST00000216085 DNM3Q9UQ16 869 aa22.55■■□□□ 1.2
RHBDD3-201ENST00000216085 WDR81Q562E7 1941 aa22.55■■□□□ 1.2
RHBDD3-201ENST00000216085 SNX17Q15036 470 aa22.55■■□□□ 1.2
RHBDD3-201ENST00000216085 HYIQ5T013 277 aa22.55■■□□□ 1.2
RHBDD3-201ENST00000216085 AXDND1Q5T1B0 1012 aaPredicted RBP22.55■■□□□ 1.2
RHBDD3-201ENST00000216085 EXOC8Q8IYI6 725 aa22.55■■□□□ 1.2
RHBDD3-201ENST00000216085 PYM1Q9BRP8 204 aaKnown RBP22.55■■□□□ 1.2
RHBDD3-201ENST00000216085 MMTAG2Q9BU76 263 aaKnown RBP22.55■■□□□ 1.2
RHBDD3-201ENST00000216085 NIFKQ9BYG3 293 aaKnown RBP22.55■■□□□ 1.2
RHBDD3-201ENST00000216085 GRIN2DO15399 1336 aa22.55■■□□□ 1.2
RHBDD3-201ENST00000216085 DCDC2CA8MYV0 355 aa22.54■■□□□ 1.2
RHBDD3-201ENST00000216085 IGBP1P78318 339 aa22.54■■□□□ 1.2
RHBDD3-201ENST00000216085 EPSTI1Q96J88 318 aa22.54■■□□□ 1.2
RHBDD3-201ENST00000216085 SETD4Q9NVD3 440 aa22.54■■□□□ 1.2
RHBDD3-201ENST00000216085 WRAP73Q9P2S5 460 aaPredicted RBP22.54■■□□□ 1.2
RHBDD3-201ENST00000216085 PQBP1O60828 265 aaKnown RBP22.53■■□□□ 1.2
RHBDD3-201ENST00000216085 CDK7P50613 346 aa22.53■■□□□ 1.2
RHBDD3-201ENST00000216085 MTERF2Q49AM1 385 aa22.53■■□□□ 1.2
RHBDD3-201ENST00000216085 XKR9Q5GH70 373 aa22.53■■□□□ 1.2
RHBDD3-201ENST00000216085 CCDC73Q6ZRK6 1079 aa22.53■■□□□ 1.2
RHBDD3-201ENST00000216085 ANO5Q75V66 913 aa22.53■■□□□ 1.2
RHBDD3-201ENST00000216085 LMBR1Q8WVP7 490 aa22.53■■□□□ 1.2
RHBDD3-201ENST00000216085 CEP170P1Q96L14 293 aa22.53■■□□□ 1.2
RHBDD3-201ENST00000216085 TOX2Q96NM4 488 aa22.53■■□□□ 1.2
RHBDD3-201ENST00000216085 JPH2Q9BR39 696 aaPredicted RBP22.53■■□□□ 1.2
RHBDD3-201ENST00000216085 TUBE1Q9UJT0 475 aa22.53■■□□□ 1.2
RHBDD3-201ENST00000216085 DBR1Q9UK59 544 aaKnown RBP22.53■■□□□ 1.2
RHBDD3-201ENST00000216085 ATP11BQ9Y2G3 1177 aa22.53■■□□□ 1.2
RHBDD3-201ENST00000216085 TBC1D8BQ0IIM8 1120 aa22.53■■□□□ 1.2
RHBDD3-201ENST00000216085 KARSQ15046 597 aaKnown RBP22.53■■□□□ 1.2
RHBDD3-201ENST00000216085 PTGISQ16647 500 aa22.53■■□□□ 1.2
RHBDD3-201ENST00000216085 RESP18Q5W5W9 173 aa22.53■■□□□ 1.2
RHBDD3-201ENST00000216085 ANKRD33Q7Z3H0 272 aa22.53■■□□□ 1.2
RHBDD3-201ENST00000216085 CYP26B1Q9NR63 512 aa22.53■■□□□ 1.2
RHBDD3-201ENST00000216085 A0A1W2PQ27 194 aa22.52■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms