RNA–Protein interactions for RNA: ENST00000191018.9

CTSA-201, Transcript of cathepsin A, humanhuman

TSL 1 (best) BASIC

Gene CTSA, Length 1,898 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-201ENST00000191018 NLRX1Q86UT6 975 aa20.54■□□□□ 0.88
CTSA-201ENST00000191018 FIZ1Q96SL8 496 aa20.54■□□□□ 0.88
CTSA-201ENST00000191018 MRPL44Q9H9J2 332 aaKnown RBP20.54■□□□□ 0.88
CTSA-201ENST00000191018 ZBTB4Q9P1Z0 1013 aaPredicted RBP20.54■□□□□ 0.88
CTSA-201ENST00000191018 BTBD7Q9P203 1132 aa20.54■□□□□ 0.88
CTSA-201ENST00000191018 SEL1LQ9UBV2 794 aa20.54■□□□□ 0.88
CTSA-201ENST00000191018 SOWAHDA6NJG2 315 aa20.54■□□□□ 0.88
CTSA-201ENST00000191018 PDXKO00764 312 aa20.54■□□□□ 0.88
CTSA-201ENST00000191018 EIF3DO15371 548 aaKnown RBP eCLIP20.54■□□□□ 0.88
CTSA-201ENST00000191018 STAM2O75886 525 aa20.54■□□□□ 0.88
CTSA-201ENST00000191018 CCNE2O96020 404 aa20.54■□□□□ 0.88
CTSA-201ENST00000191018 SFNP31947 248 aa20.54■□□□□ 0.88
CTSA-201ENST00000191018 JAK3P52333 1124 aa20.54■□□□□ 0.88
CTSA-201ENST00000191018 FKBP15Q5T1M5 1219 aa20.54■□□□□ 0.88
CTSA-201ENST00000191018 RAD9BQ6WBX8 426 aa20.54■□□□□ 0.88
CTSA-201ENST00000191018 RIOX2Q8IUF8 465 aa20.54■□□□□ 0.88
CTSA-201ENST00000191018 SENP7Q9BQF6 1050 aa20.54■□□□□ 0.88
CTSA-201ENST00000191018 TAF1DQ9H5J8 278 aaPredicted RBP20.54■□□□□ 0.88
CTSA-201ENST00000191018 PARVGQ9HBI0 331 aa20.54■□□□□ 0.88
CTSA-201ENST00000191018 SAMM50Q9Y512 469 aa20.54■□□□□ 0.88
CTSA-201ENST00000191018 ARHGEF35A5YM69 484 aa20.53■□□□□ 0.88
CTSA-201ENST00000191018 PRPF6O94906 941 aaKnown RBP20.53■□□□□ 0.88
CTSA-201ENST00000191018 TUBB4AP04350 444 aa20.53■□□□□ 0.88
CTSA-201ENST00000191018 MTF1Q14872 753 aa20.53■□□□□ 0.88
CTSA-201ENST00000191018 GADL1Q6ZQY3 521 aa20.53■□□□□ 0.88
CTSA-201ENST00000191018 MYRIPQ8NFW9 859 aa20.53■□□□□ 0.88
CTSA-201ENST00000191018 RDM1Q8NG50 284 aa20.53■□□□□ 0.88
CTSA-201ENST00000191018 DNAJC7Q99615 494 aa20.53■□□□□ 0.88
CTSA-201ENST00000191018 POLD4Q9HCU8 107 aa20.53■□□□□ 0.88
CTSA-201ENST00000191018 PAXBP1Q9Y5B6 917 aa20.53■□□□□ 0.88
CTSA-201ENST00000191018 SRCAPQ6ZRS2 3230 aa20.53■□□□□ 0.88
CTSA-201ENST00000191018 SFI1A8K8P3 1242 aa20.52■□□□□ 0.88
CTSA-201ENST00000191018 WDR64B1ANS9 1081 aa20.52■□□□□ 0.88
CTSA-201ENST00000191018 KCNA2P16389 499 aa20.52■□□□□ 0.88
CTSA-201ENST00000191018 MAPK7Q13164 816 aa20.52■□□□□ 0.88
CTSA-201ENST00000191018 PPIL2Q13356 520 aa20.52■□□□□ 0.88
CTSA-201ENST00000191018 ZNF746Q6NUN9 644 aaPredicted RBP20.52■□□□□ 0.88
CTSA-201ENST00000191018 TMTC1Q8IUR5 882 aa20.52■□□□□ 0.88
CTSA-201ENST00000191018 C4orf19Q8IY42 314 aa20.52■□□□□ 0.88
CTSA-201ENST00000191018 IQCDQ96DY2 449 aa20.52■□□□□ 0.88
CTSA-201ENST00000191018 SIK3Q9Y2K2 1263 aa20.52■□□□□ 0.88
CTSA-201ENST00000191018 LUC7L2Q9Y383 392 aaKnown RBP20.52■□□□□ 0.88
CTSA-201ENST00000191018 DOCK5Q9H7D0 1870 aa20.52■□□□□ 0.88
CTSA-201ENST00000191018 GCNT3O95395 438 aa20.52■□□□□ 0.87
CTSA-201ENST00000191018 RARRES1P49788 294 aa20.52■□□□□ 0.87
CTSA-201ENST00000191018 KLK7P49862 253 aa20.52■□□□□ 0.87
CTSA-201ENST00000191018 ERVK-24P63145 666 aa20.52■□□□□ 0.87
CTSA-201ENST00000191018 ADAM9Q13443 819 aa20.52■□□□□ 0.87
CTSA-201ENST00000191018 TRIM59Q8IWR1 403 aa20.52■□□□□ 0.87
CTSA-201ENST00000191018 MYCT1Q8N699 235 aa20.52■□□□□ 0.87
CTSA-201ENST00000191018 DNERQ8NFT8 737 aa20.52■□□□□ 0.87
CTSA-201ENST00000191018 OR8K1Q8NGG5 319 aa20.52■□□□□ 0.87
CTSA-201ENST00000191018 IWS1Q96ST2 819 aa20.52■□□□□ 0.87
CTSA-201ENST00000191018 TYW1Q9NV66 732 aaKnown RBP20.52■□□□□ 0.87
CTSA-201ENST00000191018 FBXO40Q9UH90 709 aa20.52■□□□□ 0.87
CTSA-201ENST00000191018 A0A1W2PQJ5 194 aa20.51■□□□□ 0.87
CTSA-201ENST00000191018 IQCA1LA6NCM1 817 aa20.51■□□□□ 0.87
CTSA-201ENST00000191018 MOGSQ13724 837 aa20.51■□□□□ 0.87
CTSA-201ENST00000191018 UGCGQ16739 394 aa20.51■□□□□ 0.87
CTSA-201ENST00000191018 CCDC40Q4G0X9 1142 aa20.51■□□□□ 0.87
CTSA-201ENST00000191018 PADI6Q6TGC4 694 aa20.51■□□□□ 0.87
CTSA-201ENST00000191018 DAW1Q8N136 415 aa20.51■□□□□ 0.87
CTSA-201ENST00000191018 CDHR1Q96JP9 859 aa20.51■□□□□ 0.87
CTSA-201ENST00000191018 AGTPBP1Q9UPW5 1226 aa20.51■□□□□ 0.87
CTSA-201ENST00000191018 ASTN1O14525 1302 aa20.51■□□□□ 0.87
CTSA-201ENST00000191018 NFASCO94856 1347 aa20.51■□□□□ 0.87
CTSA-201ENST00000191018 UBE4BO95155 1302 aa20.51■□□□□ 0.87
CTSA-201ENST00000191018 GOLGA6L9A6NEM1 432 aa20.5■□□□□ 0.87
CTSA-201ENST00000191018 CETN3O15182 167 aa20.5■□□□□ 0.87
CTSA-201ENST00000191018 CALUO43852 315 aaPredicted RBP20.5■□□□□ 0.87
CTSA-201ENST00000191018 TRIM21P19474 475 aaKnown RBP20.5■□□□□ 0.87
CTSA-201ENST00000191018 NR2F2P24468 414 aa20.5■□□□□ 0.87
CTSA-201ENST00000191018 PSMC5P62195 406 aa20.5■□□□□ 0.87
CTSA-201ENST00000191018 TTLL12Q14166 644 aaPredicted RBP20.5■□□□□ 0.87
CTSA-201ENST00000191018 GPR162Q16538 588 aa20.5■□□□□ 0.87
CTSA-201ENST00000191018 CYP26C1Q6V0L0 522 aa20.5■□□□□ 0.87
CTSA-201ENST00000191018 ZNF720Q7Z2F6 126 aa20.5■□□□□ 0.87
CTSA-201ENST00000191018 SPATC1LQ9H0A9 340 aa20.5■□□□□ 0.87
CTSA-201ENST00000191018 ASCC2Q9H1I8 757 aaPredicted RBP20.5■□□□□ 0.87
CTSA-201ENST00000191018 ADGRG1Q9Y653 693 aa20.5■□□□□ 0.87
CTSA-201ENST00000191018 PFASO15067 1338 aa20.5■□□□□ 0.87
CTSA-201ENST00000191018 ZMYM2Q9UBW7 1377 aa20.5■□□□□ 0.87
CTSA-201ENST00000191018 UQCRHLA0A096LP55 91 aa20.5■□□□□ 0.87
CTSA-201ENST00000191018 PEX10O60683 326 aa20.5■□□□□ 0.87
CTSA-201ENST00000191018 UQCRHP07919 91 aa20.5■□□□□ 0.87
CTSA-201ENST00000191018 NMT1P30419 496 aaKnown RBP20.5■□□□□ 0.87
CTSA-201ENST00000191018 IRX3P78415 501 aaPredicted RBP20.5■□□□□ 0.87
CTSA-201ENST00000191018 TRIM65Q6PJ69 517 aa20.5■□□□□ 0.87
CTSA-201ENST00000191018 MOV10L1Q9BXT6 1211 aaKnown RBP20.5■□□□□ 0.87
CTSA-201ENST00000191018 AGPAT5Q9NUQ2 364 aa20.5■□□□□ 0.87
CTSA-201ENST00000191018 TCEAL9Q9UHQ7 104 aa20.5■□□□□ 0.87
CTSA-201ENST00000191018 SPATA31C2B4DYI2 1134 aa20.49■□□□□ 0.87
CTSA-201ENST00000191018 TGFB1I1O43294 461 aa20.49■□□□□ 0.87
CTSA-201ENST00000191018 HIP1RO75146 1068 aa20.49■□□□□ 0.87
CTSA-201ENST00000191018 YWHABP31946 246 aaKnown RBP20.49■□□□□ 0.87
CTSA-201ENST00000191018 GTF2F1P35269 517 aaKnown RBP eCLIP20.49■□□□□ 0.876e-6■■■■□ 21.5
CTSA-201ENST00000191018 HERVK_113P62684 666 aa20.49■□□□□ 0.87
CTSA-201ENST00000191018 ZBED6P86452 979 aa20.49■□□□□ 0.87
CTSA-201ENST00000191018 KCNA1Q09470 495 aa20.49■□□□□ 0.87
CTSA-201ENST00000191018 MEA1Q16626 185 aa20.49■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms