RNA–Protein interactions for RNA: ENST00000013807.9

ERCC1-201, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 1 (best) BASIC

Gene ERCC1, Length 1,278 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-201ENST00000013807 SCG2P13521 617 aa18.09■□□□□ 0.49
ERCC1-201ENST00000013807 GPM6BQ13491 265 aa18.09■□□□□ 0.49
ERCC1-201ENST00000013807 PKN1Q16512 942 aa18.09■□□□□ 0.49
ERCC1-201ENST00000013807 FIBCD1Q8N539 461 aa18.09■□□□□ 0.49
ERCC1-201ENST00000013807 PGBD1Q96JS3 809 aa18.09■□□□□ 0.49
ERCC1-201ENST00000013807 TMEM260Q9NX78 707 aa18.09■□□□□ 0.49
ERCC1-201ENST00000013807 FNDC1Q4ZHG4 1894 aaPredicted RBP18.09■□□□□ 0.49
ERCC1-201ENST00000013807 ADGRA3Q8IWK6 1321 aa18.08■□□□□ 0.49
ERCC1-201ENST00000013807 POTEB3A0JP26 581 aa18.08■□□□□ 0.48
ERCC1-201ENST00000013807 EPB41L2O43491 1005 aaKnown RBP18.08■□□□□ 0.48
ERCC1-201ENST00000013807 DGKIO75912 1065 aa18.08■□□□□ 0.48
ERCC1-201ENST00000013807 CCNE2O96020 404 aa18.08■□□□□ 0.48
ERCC1-201ENST00000013807 BMPR1AP36894 532 aa18.08■□□□□ 0.48
ERCC1-201ENST00000013807 METAP2P50579 478 aaKnown RBP eCLIP18.08■□□□□ 0.48
ERCC1-201ENST00000013807 NTRK3Q16288 839 aa18.08■□□□□ 0.48
ERCC1-201ENST00000013807 TIGD5Q53EQ6 642 aa18.08■□□□□ 0.48
ERCC1-201ENST00000013807 POTEBQ6S5H4 581 aa18.08■□□□□ 0.48
ERCC1-201ENST00000013807 RTN4RL1Q86UN2 441 aaPredicted RBP18.08■□□□□ 0.48
ERCC1-201ENST00000013807 BANK1Q8NDB2 785 aa18.08■□□□□ 0.48
ERCC1-201ENST00000013807 NEK9Q8TD19 979 aa18.08■□□□□ 0.48
ERCC1-201ENST00000013807 C1QTNF1Q9BXJ1 281 aa18.08■□□□□ 0.48
ERCC1-201ENST00000013807 LMAN2LQ9H0V9 348 aa18.08■□□□□ 0.48
ERCC1-201ENST00000013807 SNX14Q9Y5W7 946 aa18.08■□□□□ 0.48
ERCC1-201ENST00000013807 COL1A2P08123 1366 aa18.07■□□□□ 0.48
ERCC1-201ENST00000013807 HBP1O60381 514 aa18.07■□□□□ 0.48
ERCC1-201ENST00000013807 CIITAP33076 1130 aa18.07■□□□□ 0.48
ERCC1-201ENST00000013807 IGBP1P78318 339 aa18.07■□□□□ 0.48
ERCC1-201ENST00000013807 APOBRQ0VD83 1088 aa18.07■□□□□ 0.48
ERCC1-201ENST00000013807 MTHFD1LQ6UB35 978 aa18.07■□□□□ 0.48
ERCC1-201ENST00000013807 Q6ZUG5 572 aa18.07■□□□□ 0.48
ERCC1-201ENST00000013807 GADD45GIP1Q8TAE8 222 aaPredicted RBP18.07■□□□□ 0.48
ERCC1-201ENST00000013807 ATP8B4Q8TF62 1192 aa18.07■□□□□ 0.48
ERCC1-201ENST00000013807 CCDC12Q8WUD4 166 aaPredicted RBP18.07■□□□□ 0.48
ERCC1-201ENST00000013807 LINC01599Q8WXQ3 324 aa18.07■□□□□ 0.48
ERCC1-201ENST00000013807 PLVAPQ9BX97 442 aa18.07■□□□□ 0.48
ERCC1-201ENST00000013807 CELF4Q9BZC1 486 aaKnown RBP18.07■□□□□ 0.48
ERCC1-201ENST00000013807 TBC1D22BQ9NU19 505 aa18.07■□□□□ 0.48
ERCC1-201ENST00000013807 TRPC6Q9Y210 931 aa18.07■□□□□ 0.48
ERCC1-201ENST00000013807 TRPV2Q9Y5S1 764 aa18.07■□□□□ 0.48
ERCC1-201ENST00000013807 IPO5O00410 1097 aaKnown RBP18.06■□□□□ 0.48
ERCC1-201ENST00000013807 CPA1P15085 419 aa18.06■□□□□ 0.48
ERCC1-201ENST00000013807 COL9A1P20849 921 aa18.06■□□□□ 0.48
ERCC1-201ENST00000013807 GNA11P29992 359 aa18.06■□□□□ 0.48
ERCC1-201ENST00000013807 CD52P31358 61 aa18.06■□□□□ 0.48
ERCC1-201ENST00000013807 ZNF76P36508 570 aa18.06■□□□□ 0.48
ERCC1-201ENST00000013807 PUS10Q3MIT2 529 aaKnown RBP18.06■□□□□ 0.48
ERCC1-201ENST00000013807 BLOC1S2Q6QNY1 142 aa18.06■□□□□ 0.48
ERCC1-201ENST00000013807 PLA2G4DQ86XP0 818 aa18.06■□□□□ 0.48
ERCC1-201ENST00000013807 BRF1Q92994 677 aa18.06■□□□□ 0.48
ERCC1-201ENST00000013807 ZBTB10Q96DT7 871 aa18.06■□□□□ 0.48
ERCC1-201ENST00000013807 FAM49AQ9H0Q0 323 aaPredicted RBP18.06■□□□□ 0.48
ERCC1-201ENST00000013807 C6orf50Q9HD87 102 aa18.06■□□□□ 0.48
ERCC1-201ENST00000013807 PADI3Q9ULW8 664 aa18.06■□□□□ 0.48
ERCC1-201ENST00000013807 ZBTB42B2RXF5 422 aa18.05■□□□□ 0.48
ERCC1-201ENST00000013807 M0QZ92 97 aa18.05■□□□□ 0.48
ERCC1-201ENST00000013807 NCK2O43639 380 aa18.05■□□□□ 0.48
ERCC1-201ENST00000013807 ATP4AP20648 1035 aa18.05■□□□□ 0.48
ERCC1-201ENST00000013807 RPS6KB1P23443 525 aa18.05■□□□□ 0.48
ERCC1-201ENST00000013807 KLRC1P26715 233 aa18.05■□□□□ 0.48
ERCC1-201ENST00000013807 FGD1P98174 961 aa18.05■□□□□ 0.48
ERCC1-201ENST00000013807 SETQ01105 290 aaPredicted RBP18.05■□□□□ 0.48
ERCC1-201ENST00000013807 ZNF484Q5JVG2 852 aa18.05■□□□□ 0.48
ERCC1-201ENST00000013807 JAKMIP3Q5VZ66 844 aa18.05■□□□□ 0.48
ERCC1-201ENST00000013807 FAM160B1Q5W0V3 765 aa18.05■□□□□ 0.48
ERCC1-201ENST00000013807 ZNF746Q6NUN9 644 aaPredicted RBP18.05■□□□□ 0.48
ERCC1-201ENST00000013807 CCDC60Q8IWA6 550 aaPredicted RBP18.05■□□□□ 0.48
ERCC1-201ENST00000013807 FAM178BQ8IXR5 827 aa18.05■□□□□ 0.48
ERCC1-201ENST00000013807 TRAPPC12Q8WVT3 735 aa18.05■□□□□ 0.48
ERCC1-201ENST00000013807 P2RX5Q93086 422 aa18.05■□□□□ 0.48
ERCC1-201ENST00000013807 PABPC5Q96DU9 382 aaKnown RBP18.05■□□□□ 0.48
ERCC1-201ENST00000013807 JAKMIP1Q96N16 626 aaKnown RBP18.05■□□□□ 0.48
ERCC1-201ENST00000013807 C11orf84Q9BUA3 381 aaPredicted RBP18.05■□□□□ 0.48
ERCC1-201ENST00000013807 RNF26Q9BY78 433 aaPredicted RBP18.05■□□□□ 0.48
ERCC1-201ENST00000013807 NSUN3Q9H649 340 aaKnown RBP18.05■□□□□ 0.48
ERCC1-201ENST00000013807 MAFBQ9Y5Q3 323 aaPredicted RBP18.05■□□□□ 0.48
ERCC1-201ENST00000013807 ADAMTS3O15072 1205 aa18.04■□□□□ 0.48
ERCC1-201ENST00000013807 IFNAR1P17181 557 aa18.04■□□□□ 0.48
ERCC1-201ENST00000013807 PSMA5P28066 241 aa18.04■□□□□ 0.48
ERCC1-201ENST00000013807 KRT76Q01546 638 aa18.04■□□□□ 0.48
ERCC1-201ENST00000013807 CTC1Q2NKJ3 1217 aa18.04■□□□□ 0.48
ERCC1-201ENST00000013807 NAALADL2Q58DX5 795 aa18.04■□□□□ 0.48
ERCC1-201ENST00000013807 NPAS4Q8IUM7 802 aa18.04■□□□□ 0.48
ERCC1-201ENST00000013807 SMAP1Q8IYB5 467 aaPredicted RBP18.04■□□□□ 0.48
ERCC1-201ENST00000013807 CMTR2Q8IYT2 770 aaKnown RBP18.04■□□□□ 0.48
ERCC1-201ENST00000013807 KIAA0319LQ8IZA0 1049 aa18.04■□□□□ 0.48
ERCC1-201ENST00000013807 REXO1Q8N1G1 1221 aaKnown RBP18.04■□□□□ 0.48
ERCC1-201ENST00000013807 ZNF302Q9NR11 478 aa18.04■□□□□ 0.48
ERCC1-201ENST00000013807 C5orf42Q9H799 3197 aa18.03■□□□□ 0.48
ERCC1-201ENST00000013807 GRXCR2A6NFK2 248 aa18.03■□□□□ 0.48
ERCC1-201ENST00000013807 REC8O95072 547 aa18.03■□□□□ 0.48
ERCC1-201ENST00000013807 KCNA5P22460 613 aa18.03■□□□□ 0.48
ERCC1-201ENST00000013807 BTG3Q14201 252 aaPredicted RBP18.03■□□□□ 0.48
ERCC1-201ENST00000013807 TCEAL5Q5H9L2 206 aa18.03■□□□□ 0.48
ERCC1-201ENST00000013807 MIS18BP1Q6P0N0 1132 aa18.03■□□□□ 0.48
ERCC1-201ENST00000013807 BICD2Q8TD16 824 aa18.03■□□□□ 0.48
ERCC1-201ENST00000013807 BBXQ8WY36 941 aaPredicted RBP18.03■□□□□ 0.48
ERCC1-201ENST00000013807 LENG9Q96B70 501 aa18.03■□□□□ 0.48
ERCC1-201ENST00000013807 ZNF577Q9BSK1 485 aa18.03■□□□□ 0.48
ERCC1-201ENST00000013807 TMX1Q9H3N1 280 aa18.03■□□□□ 0.48
ERCC1-201ENST00000013807 CD320Q9NPF0 282 aa18.03■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms