RNA–Protein interactions for RNA: ENST00000006053.6

CX3CL1-201, Transcript of C-X3-C motif chemokine ligand 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CX3CL1, Length 3,321 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1-201ENST00000006053 KRT71Q3SY84 523 aa11.48□□□□□ -0.57
CX3CL1-201ENST00000006053 TTBK2Q6IQ55 1244 aa11.48□□□□□ -0.57
CX3CL1-201ENST00000006053 LRIG3Q6UXM1 1119 aa11.48□□□□□ -0.57
CX3CL1-201ENST00000006053 RUFY4Q6ZNE9 571 aa11.48□□□□□ -0.57
CX3CL1-201ENST00000006053 SCFD2Q8WU76 684 aa11.48□□□□□ -0.57
CX3CL1-201ENST00000006053 VCPKMTQ9H867 229 aa11.48□□□□□ -0.57
CX3CL1-201ENST00000006053 NAGPAQ9UK23 515 aa11.48□□□□□ -0.57
CX3CL1-201ENST00000006053 XIRP1Q702N8 1843 aaKnown RBP11.47□□□□□ -0.57
CX3CL1-201ENST00000006053 TTI1O43156 1089 aa11.47□□□□□ -0.57
CX3CL1-201ENST00000006053 UCHL3P15374 230 aa11.47□□□□□ -0.57
CX3CL1-201ENST00000006053 RDXP35241 583 aaKnown RBP11.47□□□□□ -0.57
CX3CL1-201ENST00000006053 CDR1P51861 262 aa11.47□□□□□ -0.57
CX3CL1-201ENST00000006053 PRPF4BQ13523 1007 aaKnown RBP11.47□□□□□ -0.57
CX3CL1-201ENST00000006053 EXOC3L4Q17RC7 722 aa11.47□□□□□ -0.57
CX3CL1-201ENST00000006053 EMC10Q5UCC4 262 aa11.47□□□□□ -0.57
CX3CL1-201ENST00000006053 ZNF804AQ7Z570 1209 aa11.47□□□□□ -0.57
CX3CL1-201ENST00000006053 IRF2BP2Q7Z5L9 587 aa11.47□□□□□ -0.57
CX3CL1-201ENST00000006053 ADAT2Q7Z6V5 191 aaKnown RBP11.47□□□□□ -0.57
CX3CL1-201ENST00000006053 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.47□□□□□ -0.572e-9■■□□□ 13.1
CX3CL1-201ENST00000006053 KCTD10Q9H3F6 313 aa11.47□□□□□ -0.57
CX3CL1-201ENST00000006053 KLC4Q9NSK0 619 aa11.47□□□□□ -0.57
CX3CL1-201ENST00000006053 CNOT8Q9UFF9 292 aaKnown RBP11.47□□□□□ -0.57
CX3CL1-201ENST00000006053 ARMCX3Q9UH62 379 aaPredicted RBP11.47□□□□□ -0.57
CX3CL1-201ENST00000006053 CCDC88AQ3V6T2 1871 aa11.47□□□□□ -0.57
CX3CL1-201ENST00000006053 DCDC2CA8MYV0 355 aa11.47□□□□□ -0.57
CX3CL1-201ENST00000006053 H0YGN5 161 aa11.47□□□□□ -0.57
CX3CL1-201ENST00000006053 CASP5P51878 434 aa11.47□□□□□ -0.57
CX3CL1-201ENST00000006053 MAGOHP61326 146 aaKnown RBP11.47□□□□□ -0.57
CX3CL1-201ENST00000006053 DHX9Q08211 1270 aaKnown RBP11.47□□□□□ -0.57
CX3CL1-201ENST00000006053 IFFO1Q0D2I5 559 aa11.47□□□□□ -0.57
CX3CL1-201ENST00000006053 SEPT2Q15019 361 aa11.47□□□□□ -0.57
CX3CL1-201ENST00000006053 YTHDF3Q7Z739 585 aaKnown RBP11.47□□□□□ -0.57
CX3CL1-201ENST00000006053 DAAM2Q86T65 1068 aa11.47□□□□□ -0.57
CX3CL1-201ENST00000006053 U2AF1L4Q8WU68 220 aaKnown RBP11.47□□□□□ -0.57
CX3CL1-201ENST00000006053 MAGOHBQ96A72 148 aaKnown RBP11.47□□□□□ -0.57
CX3CL1-201ENST00000006053 NT5C3AQ9H0P0 336 aa11.47□□□□□ -0.57
CX3CL1-201ENST00000006053 DDX20Q9UHI6 824 aaKnown RBP11.47□□□□□ -0.57
CX3CL1-201ENST00000006053 NFS1Q9Y697 457 aa11.47□□□□□ -0.57
CX3CL1-201ENST00000006053 EP400Q96L91 3159 aa11.47□□□□□ -0.57
CX3CL1-201ENST00000006053 LAMB2P55268 1798 aa11.47□□□□□ -0.57
CX3CL1-201ENST00000006053 MEIS1O00470 390 aa11.47□□□□□ -0.57
CX3CL1-201ENST00000006053 CYP11B2P19099 503 aa11.47□□□□□ -0.57
CX3CL1-201ENST00000006053 SMARCA1P28370 1054 aa11.47□□□□□ -0.57
CX3CL1-201ENST00000006053 PPP2R2AP63151 447 aa11.47□□□□□ -0.57
CX3CL1-201ENST00000006053 GJB7Q6PEY0 223 aa11.47□□□□□ -0.57
CX3CL1-201ENST00000006053 DPP8Q6V1X1 898 aaPredicted RBP11.47□□□□□ -0.57
CX3CL1-201ENST00000006053 TPCN2Q8NHX9 752 aa11.47□□□□□ -0.57
CX3CL1-201ENST00000006053 ACTRT1Q8TDG2 376 aa11.47□□□□□ -0.57
CX3CL1-201ENST00000006053 POTEFA5A3E0 1075 aa11.46□□□□□ -0.57
CX3CL1-201ENST00000006053 FLOT1O75955 427 aa11.46□□□□□ -0.57
CX3CL1-201ENST00000006053 AFPP02771 609 aaKnown RBP11.46□□□□□ -0.57
CX3CL1-201ENST00000006053 H2AFZP0C0S5 128 aa11.46□□□□□ -0.57
CX3CL1-201ENST00000006053 POTEIP0CG38 1075 aa11.46□□□□□ -0.57
CX3CL1-201ENST00000006053 POTEGQ6S5H5 508 aa11.46□□□□□ -0.57
CX3CL1-201ENST00000006053 POTEEQ6S8J3 1075 aa11.46□□□□□ -0.57
CX3CL1-201ENST00000006053 H2AFVQ71UI9 128 aa11.46□□□□□ -0.57
CX3CL1-201ENST00000006053 ADGRF4Q8IZF3 695 aa11.46□□□□□ -0.57
CX3CL1-201ENST00000006053 CUL5Q93034 780 aa11.46□□□□□ -0.57
CX3CL1-201ENST00000006053 PAGR1Q9BTK6 254 aa11.46□□□□□ -0.57
CX3CL1-201ENST00000006053 JMJD4Q9H9V9 463 aa11.46□□□□□ -0.57
CX3CL1-201ENST00000006053 SLC40A1Q9NP59 571 aa11.46□□□□□ -0.57
CX3CL1-201ENST00000006053 PCDHA2Q9Y5H9 948 aa11.46□□□□□ -0.57
CX3CL1-201ENST00000006053 PHF20L1A8MW92 1017 aa11.46□□□□□ -0.58
CX3CL1-201ENST00000006053 USP17L15C9J2P7 530 aa11.46□□□□□ -0.58
CX3CL1-201ENST00000006053 USP17L13C9JLJ4 530 aa11.46□□□□□ -0.58
CX3CL1-201ENST00000006053 USP17L11C9JVI0 530 aa11.46□□□□□ -0.58
CX3CL1-201ENST00000006053 USP17L18D6R9N7 530 aa11.46□□□□□ -0.58
CX3CL1-201ENST00000006053 USP17L22D6RA61 530 aa11.46□□□□□ -0.58
CX3CL1-201ENST00000006053 USP17L17D6RBQ6 530 aa11.46□□□□□ -0.58
CX3CL1-201ENST00000006053 USP17L19D6RCP7 530 aa11.46□□□□□ -0.58
CX3CL1-201ENST00000006053 USP17L20D6RJB6 530 aa11.46□□□□□ -0.58
CX3CL1-201ENST00000006053 hCG_1984214I3L0E3 225 aa11.46□□□□□ -0.58
CX3CL1-201ENST00000006053 PPP1R11O60927 126 aaPredicted RBP11.46□□□□□ -0.58
CX3CL1-201ENST00000006053 AKR1B1P15121 316 aa11.46□□□□□ -0.58
CX3CL1-201ENST00000006053 PAX7P23759 505 aa11.46□□□□□ -0.58
CX3CL1-201ENST00000006053 TM4SF1P30408 202 aa11.46□□□□□ -0.58
CX3CL1-201ENST00000006053 USP17L24Q0WX57 530 aa11.46□□□□□ -0.58
CX3CL1-201ENST00000006053 ASPRV1Q53RT3 343 aa11.46□□□□□ -0.58
CX3CL1-201ENST00000006053 USP17L6PQ6QN14 398 aa11.46□□□□□ -0.58
CX3CL1-201ENST00000006053 KCTD1Q719H9 257 aa11.46□□□□□ -0.58
CX3CL1-201ENST00000006053 CPLX4Q7Z7G2 160 aa11.46□□□□□ -0.58
CX3CL1-201ENST00000006053 ZNF713Q8N859 430 aaPredicted RBP11.46□□□□□ -0.58
CX3CL1-201ENST00000006053 LRRC57Q8N9N7 239 aa11.46□□□□□ -0.58
CX3CL1-201ENST00000006053 C1orf131Q8NDD1 294 aaKnown RBP11.46□□□□□ -0.58
CX3CL1-201ENST00000006053 RBM46Q8TBY0 533 aaKnown RBP11.46□□□□□ -0.58
CX3CL1-201ENST00000006053 RAPGEF5Q92565 580 aa11.46□□□□□ -0.58
CX3CL1-201ENST00000006053 TRIM51Q9BSJ1 452 aa11.46□□□□□ -0.58
CX3CL1-201ENST00000006053 PSTPIP2Q9H939 334 aa11.46□□□□□ -0.58
CX3CL1-201ENST00000006053 GOPCQ9HD26 462 aa11.46□□□□□ -0.58
CX3CL1-201ENST00000006053 MTMR4Q9NYA4 1195 aa11.46□□□□□ -0.58
CX3CL1-201ENST00000006053 SLC12A6Q9UHW9 1150 aa11.46□□□□□ -0.58
CX3CL1-201ENST00000006053 ATP8A1Q9Y2Q0 1164 aa11.46□□□□□ -0.58
CX3CL1-201ENST00000006053 KDM3AQ9Y4C1 1321 aa11.46□□□□□ -0.58
CX3CL1-201ENST00000006053 XRCC5P13010 732 aaKnown RBP11.45□□□□□ -0.58
CX3CL1-201ENST00000006053 PON1P27169 355 aa11.45□□□□□ -0.58
CX3CL1-201ENST00000006053 MRPL12P52815 198 aaKnown RBP11.45□□□□□ -0.58
CX3CL1-201ENST00000006053 PABPC4Q13310 644 aaKnown RBP eCLIP11.45□□□□□ -0.58
CX3CL1-201ENST00000006053 BIRC3Q13489 604 aa11.45□□□□□ -0.58
CX3CL1-201ENST00000006053 TMEM132AQ24JP5 1023 aa11.45□□□□□ -0.58
CX3CL1-201ENST00000006053 SPRED3Q2MJR0 410 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms